Genomic map of Arthrobacter phage Tophat (MF185725)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF185725
Definition
Arthrobacter phage Tophat, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Radnorvirus; unclassified Radnorvirus.
DB of origin
NUCCORE
Length
70091
Host Name
Arthrobacter sp.
Host domain
Bacteria
Is prophage?
undef
Number of proteins
111
%GC
61.63
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASX99145.1 MF185725_p25 hypothetical protein phrog_5161 unknown function unknown function 1 21286 21690
ASX99135.1 MF185725_p15 head-tail connector phrog_26 tail completion or Neck1 protein connector 1 11510 11980
ASX99134.1 MF185725_p14 hypothetical protein phrog_5280 unknown function unknown function 1 11003 11506
ASX99176.1 MF185725_p56 hypothetical protein phrog_8744 unknown function unknown function 1 41873 42382
ASX99177.1 MF185725_p57 hypothetical protein phrog_8331 unknown function unknown function 1 42375 42770
ASX99152.1 MF185725_p32 holin phrog_8269 holin lysis 1 28217 28687
ASX99229.1 MF185725_p111 HNH endonuclease phrog_1872 endonuclease DNA, RNA and nucleotide metabolism 1 69697 70035
ASX99220.1 MF185725_p102 ssDNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 64352 64921
ASX99149.1 MF185725_p29 hypothetical protein phrog_5303 unknown function unknown function 1 25931 26149
ASX99166.1 MF185725_p46 RecE-like exonuclease phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 36472 37425
ASX99170.1 MF185725_p50 hypothetical protein phrog_8370 unknown function unknown function 1 38834 39151
ASX99133.1 MF185725_p13 hypothetical protein phrog_8546 unknown function unknown function 1 10581 10982
ASX99154.1 MF185725_p34 hypothetical protein phrog_9234 unknown function unknown function -1 28952 29113
ASX99184.1 MF185725_p64 hypothetical protein phrog_9156 unknown function unknown function 1 44939 45301
ASX99206.1 MF185725_p87 hypothetical protein phrog_9063 unknown function unknown function 1 57531 57980
ASX99130.1 MF185725_p10 capsid maturation protease phrog_3894 head maturation protease head and packaging 1 7819 9273
ASX99211.1 MF185725_p92 hypothetical protein phrog_8377 unknown function unknown function 1 60797 61009
ASX99162.1 MF185725_p42 hypothetical protein phrog_9274 unknown function unknown function 1 34281 34508
ASX99151.1 MF185725_p31 lysin A phrog_291 endolysin lysis 1 26547 28202
ASX99217.1 MF185725_p98 hypothetical protein phrog_6641 secreted protein other 1 62829 63212
ASX99132.1 MF185725_p12 major capsid protein phrog_1650 major head protein head and packaging 1 9682 10578
ASX99200.1 MF185725_p81 DNA methylase phrog_363 DNA methyltransferase other 1 52033 52890
ASX99150.1 MF185725_p30 hypothetical protein phrog_5480 unknown function unknown function 1 26146 26550
ASX99231.1 MF185725_p99 hypothetical protein phrog_13279 unknown function unknown function 1 63209 63397
ASX99159.1 MF185725_p39 baseplate J-like protein phrog_6 baseplate wedge subunit tail 1 30828 31949
ASX99187.1 MF185725_p67 hypothetical protein phrog_16378 unknown function unknown function 1 45680 45811
ASX99156.1 MF185725_p36 hypothetical protein phrog_8361 unknown function unknown function -1 29552 30106
ASX99213.1 MF185725_p94 hypothetical protein phrog_8528 unknown function unknown function 1 61358 61957
ASX99197.1 MF185725_p78 hypothetical protein phrog_8606 unknown function unknown function 1 49896 50492
ASX99196.1 MF185725_p77 hypothetical protein phrog_9855 unknown function unknown function 1 49702 49899
ASX99139.1 MF185725_p19 hypothetical protein phrog_5102 tail tube protein tail 1 14372 14776
ASX99173.1 MF185725_p53 hypothetical protein phrog_8739 unknown function unknown function 1 40401 41117
ASX99218.1 MF185725_p100 hypothetical protein phrog_9956 unknown function unknown function 1 63495 63878
ASX99168.1 MF185725_p48 hypothetical protein phrog_9097 unknown function unknown function 1 38416 38568
ASX99175.1 MF185725_p55 hypothetical protein singleton unknown function unknown function 1 41586 41858
ASX99225.1 MF185725_p107 hypothetical protein phrog_8795 unknown function unknown function 1 67756 68103
ASX99203.1 MF185725_p84 hypothetical protein phrog_8619 unknown function unknown function 1 56186 56758
ASX99227.1 MF185725_p109 hypothetical protein phrog_9617 unknown function unknown function 1 68840 69133
ASX99205.1 MF185725_p86 hypothetical protein phrog_8751 unknown function unknown function 1 57179 57538
ASX99226.1 MF185725_p108 hypothetical protein phrog_8530 unknown function unknown function 1 68176 68568
ASX99185.1 MF185725_p65 hypothetical protein phrog_7014 unknown function unknown function 1 45332 45505
ASX99142.1 MF185725_p22 tape measure protein phrog_58 tail length tape measure protein tail 1 15729 19265
ASX99148.1 MF185725_p28 hypothetical protein phrog_4565 unknown function unknown function 1 25647 25934
ASX99192.1 MF185725_p73 endolysin domain protein phrog_8605 endolysin lysis 1 48296 48763
ASX99230.1 MF185725_p71 hypothetical protein phrog_10249 unknown function unknown function 1 47631 47861
ASX99147.1 MF185725_p27 tail protein phrog_5231 unknown function unknown function 1 23710 25647
ASX99141.1 MF185725_p21 hypothetical protein phrog_8820 unknown function unknown function 1 15585 15713
ASX99181.1 MF185725_p61 hypothetical protein phrog_8799 unknown function unknown function 1 43691 44653
ASX99160.1 MF185725_p40 hypothetical protein phrog_7455 tail protein tail 1 31959 33824
ASX99194.1 MF185725_p75 hypothetical protein phrog_9127 unknown function unknown function 1 49297 49464
ASX99122.1 MF185725_p2 hypothetical protein phrog_645 Rnase E DNA, RNA and nucleotide metabolism 1 657 1310
ASX99138.1 MF185725_p18 tail sheath protein phrog_23 tail sheath tail 1 12901 14349
ASX99212.1 MF185725_p93 glycosidase phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 60999 61361
ASX99179.1 MF185725_p59 hypothetical protein phrog_8327 unknown function unknown function 1 42955 43458
ASX99174.1 MF185725_p54 hypothetical protein phrog_8694 unknown function unknown function 1 41114 41578
ASX99198.1 MF185725_p79 hypothetical protein phrog_8725 unknown function unknown function 1 50489 51565
ASX99202.1 MF185725_p83 DNA methylase phrog_67 DNA methyltransferase other 1 54206 56128
ASX99121.1 MF185725_p1 hypothetical protein phrog_5264 unknown function unknown function 1 1 660
ASX99161.1 MF185725_p41 hypothetical protein phrog_9333 unknown function unknown function 1 34045 34284
ASX99146.1 MF185725_p26 tail protein phrog_5207 unknown function unknown function 1 21687 23657
ASX99228.1 MF185725_p110 hypothetical protein phrog_8478 amidase lysis 1 69162 69713
ASX99195.1 MF185725_p76 hypothetical protein phrog_9916 unknown function unknown function 1 49461 49697
ASX99188.1 MF185725_p68 hypothetical protein phrog_9166 unknown function unknown function 1 45814 46332
ASX99157.1 MF185725_p37 HTH DNA binding protein phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism -1 30167 30385
ASX99128.1 MF185725_p8 hypothetical protein phrog_10034 unknown function unknown function 1 6966 7421
ASX99199.1 MF185725_p80 hypothetical protein phrog_6326 unknown function unknown function 1 51562 51954
ASX99137.1 MF185725_p17 hypothetical protein phrog_8507 unknown function unknown function 1 12616 12897
ASX99224.1 MF185725_p106 DNA polymerase III beta subunit phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism 1 66518 67633
ASX99201.1 MF185725_p82 DNA methyltransferase domain protein phrog_1008 DNA methyltransferase other 1 52853 54130
ASX99183.1 MF185725_p63 hypothetical protein phrog_19977 unknown function unknown function 1 44754 44942
ASX99129.1 MF185725_p9 hypothetical protein phrog_8348 unknown function unknown function 1 7429 7812
ASX99207.1 MF185725_p88 hypothetical protein phrog_8410 unknown function unknown function 1 57970 58269
ASX99126.1 MF185725_p6 hypothetical protein phrog_3585 immunity protein other 1 6253 6579
ASX99131.1 MF185725_p11 head decoration phrog_673 head scaffolding protein head and packaging 1 9277 9657
ASX99210.1 MF185725_p91 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 59055 60800
ASX99191.1 MF185725_p72 hypothetical protein phrog_8715 unknown function unknown function 1 47875 48303
ASX99189.1 MF185725_p69 hypothetical protein phrog_4657 unknown function unknown function 1 46329 47186
ASX99222.1 MF185725_p104 hypothetical protein phrog_8556 unknown function unknown function 1 65453 66178
ASX99124.1 MF185725_p4 portal protein phrog_113 portal protein head and packaging 1 2813 4237
ASX99172.1 MF185725_p52 hypothetical protein phrog_8385 unknown function unknown function 1 40045 40404
ASX99216.1 MF185725_p97 hypothetical protein phrog_8648 unknown function unknown function 1 62635 62832
ASX99140.1 MF185725_p20 hypothetical protein phrog_5088 tail assembly chaperone tail 1 14908 15531
ASX99182.1 MF185725_p62 hypothetical protein phrog_19512 unknown function unknown function 1 44650 44757
ASX99204.1 MF185725_p85 hypothetical protein phrog_8502 unknown function unknown function 1 56755 57192
ASX99178.1 MF185725_p58 hypothetical protein phrog_2864 unknown function unknown function 1 42767 42958
ASX99190.1 MF185725_p70 hypothetical protein phrog_8388 unknown function unknown function 1 47183 47608
ASX99221.1 MF185725_p103 hypothetical protein singleton unknown function unknown function 1 65124 65411
ASX99163.1 MF185725_p43 ATPase-like domain protein phrog_1499 unknown function unknown function 1 34536 35771
ASX99169.1 MF185725_p49 hypothetical protein phrog_9387 unknown function unknown function 1 38571 38837
ASX99123.1 MF185725_p3 terminase phrog_2 terminase large subunit head and packaging 1 1291 2769
ASX99193.1 MF185725_p74 hypothetical protein phrog_8686 unknown function unknown function 1 48753 49310
ASX99223.1 MF185725_p105 hypothetical protein phrog_8433 unknown function unknown function 1 66266 66505
ASX99180.1 MF185725_p60 hypothetical protein phrog_8413 unknown function unknown function 1 43451 43690
ASX99153.1 MF185725_p33 hypothetical protein phrog_1933 unknown function unknown function -1 28741 28959
ASX99186.1 MF185725_p66 hypothetical protein phrog_8876 unknown function unknown function 1 45489 45677
ASX99125.1 MF185725_p5 head assembly protein phrog_595 head maturation protease head and packaging 1 4243 6222
ASX99155.1 MF185725_p35 hypothetical protein phrog_9254 unknown function unknown function -1 29208 29519
ASX99208.1 MF185725_p89 hypothetical protein phrog_8675 unknown function unknown function 1 58330 58653
ASX99136.1 MF185725_p16 hypothetical protein phrog_5178 unknown function unknown function 1 11980 12597
ASX99164.1 MF185725_p44 helix-turn-helix DNA binding domain protein phrog_8615 unknown function unknown function 1 35774 36028
ASX99165.1 MF185725_p45 hypothetical protein phrog_8731 unknown function unknown function 1 36053 36475
ASX99215.1 MF185725_p96 RusA phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 62229 62642
ASX99143.1 MF185725_p23 LysM domain protein phrog_380 endolysin lysis 1 19266 19934
ASX99127.1 MF185725_p7 hypothetical protein phrog_9140 unknown function unknown function 1 6724 6954
ASX99219.1 MF185725_p101 HNH endonuclease phrog_826 HNH endonuclease DNA, RNA and nucleotide metabolism 1 63868 64362
ASX99158.1 MF185725_p38 baseplate wedge subunit phrog_5026 baseplate protein tail 1 30497 30835
ASX99144.1 MF185725_p24 tail protein phrog_52 tail protein tail 1 19940 21283
ASX99171.1 MF185725_p51 hypothetical protein phrog_3926 replication initiation protein DNA, RNA and nucleotide metabolism 1 39219 39737
ASX99214.1 MF185725_p95 hypothetical protein phrog_9161 unknown function unknown function 1 61961 62242
ASX99167.1 MF185725_p47 recombinase phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 37422 38381
ASX99209.1 MF185725_p90 PD-(D/E) XK-like restriction enzyme phrog_5928 unknown function unknown function 1 58684 59058