| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF185725 |
Definition |
Arthrobacter phage Tophat, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Radnorvirus; unclassified Radnorvirus. |
DB of origin |
NUCCORE |
Length |
70091 |
Host Name |
Arthrobacter sp. |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
111 |
%GC |
61.63 |
Number of singletons |
2 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASX99145.1 | MF185725_p25 | hypothetical protein | phrog_5161 | unknown function | unknown function | 1 | 21286 | 21690 |
| ASX99135.1 | MF185725_p15 | head-tail connector | phrog_26 | tail completion or Neck1 protein | connector | 1 | 11510 | 11980 |
| ASX99134.1 | MF185725_p14 | hypothetical protein | phrog_5280 | unknown function | unknown function | 1 | 11003 | 11506 |
| ASX99176.1 | MF185725_p56 | hypothetical protein | phrog_8744 | unknown function | unknown function | 1 | 41873 | 42382 |
| ASX99177.1 | MF185725_p57 | hypothetical protein | phrog_8331 | unknown function | unknown function | 1 | 42375 | 42770 |
| ASX99152.1 | MF185725_p32 | holin | phrog_8269 | holin | lysis | 1 | 28217 | 28687 |
| ASX99229.1 | MF185725_p111 | HNH endonuclease | phrog_1872 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 69697 | 70035 |
| ASX99220.1 | MF185725_p102 | ssDNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 64352 | 64921 |
| ASX99149.1 | MF185725_p29 | hypothetical protein | phrog_5303 | unknown function | unknown function | 1 | 25931 | 26149 |
| ASX99166.1 | MF185725_p46 | RecE-like exonuclease | phrog_434 | RecE-like recombination exonuclease | DNA, RNA and nucleotide metabolism | 1 | 36472 | 37425 |
| ASX99170.1 | MF185725_p50 | hypothetical protein | phrog_8370 | unknown function | unknown function | 1 | 38834 | 39151 |
| ASX99133.1 | MF185725_p13 | hypothetical protein | phrog_8546 | unknown function | unknown function | 1 | 10581 | 10982 |
| ASX99154.1 | MF185725_p34 | hypothetical protein | phrog_9234 | unknown function | unknown function | -1 | 28952 | 29113 |
| ASX99184.1 | MF185725_p64 | hypothetical protein | phrog_9156 | unknown function | unknown function | 1 | 44939 | 45301 |
| ASX99206.1 | MF185725_p87 | hypothetical protein | phrog_9063 | unknown function | unknown function | 1 | 57531 | 57980 |
| ASX99130.1 | MF185725_p10 | capsid maturation protease | phrog_3894 | head maturation protease | head and packaging | 1 | 7819 | 9273 |
| ASX99211.1 | MF185725_p92 | hypothetical protein | phrog_8377 | unknown function | unknown function | 1 | 60797 | 61009 |
| ASX99162.1 | MF185725_p42 | hypothetical protein | phrog_9274 | unknown function | unknown function | 1 | 34281 | 34508 |
| ASX99151.1 | MF185725_p31 | lysin A | phrog_291 | endolysin | lysis | 1 | 26547 | 28202 |
| ASX99217.1 | MF185725_p98 | hypothetical protein | phrog_6641 | secreted protein | other | 1 | 62829 | 63212 |
| ASX99132.1 | MF185725_p12 | major capsid protein | phrog_1650 | major head protein | head and packaging | 1 | 9682 | 10578 |
| ASX99200.1 | MF185725_p81 | DNA methylase | phrog_363 | DNA methyltransferase | other | 1 | 52033 | 52890 |
| ASX99150.1 | MF185725_p30 | hypothetical protein | phrog_5480 | unknown function | unknown function | 1 | 26146 | 26550 |
| ASX99231.1 | MF185725_p99 | hypothetical protein | phrog_13279 | unknown function | unknown function | 1 | 63209 | 63397 |
| ASX99159.1 | MF185725_p39 | baseplate J-like protein | phrog_6 | baseplate wedge subunit | tail | 1 | 30828 | 31949 |
| ASX99187.1 | MF185725_p67 | hypothetical protein | phrog_16378 | unknown function | unknown function | 1 | 45680 | 45811 |
| ASX99156.1 | MF185725_p36 | hypothetical protein | phrog_8361 | unknown function | unknown function | -1 | 29552 | 30106 |
| ASX99213.1 | MF185725_p94 | hypothetical protein | phrog_8528 | unknown function | unknown function | 1 | 61358 | 61957 |
| ASX99197.1 | MF185725_p78 | hypothetical protein | phrog_8606 | unknown function | unknown function | 1 | 49896 | 50492 |
| ASX99196.1 | MF185725_p77 | hypothetical protein | phrog_9855 | unknown function | unknown function | 1 | 49702 | 49899 |
| ASX99139.1 | MF185725_p19 | hypothetical protein | phrog_5102 | tail tube protein | tail | 1 | 14372 | 14776 |
| ASX99173.1 | MF185725_p53 | hypothetical protein | phrog_8739 | unknown function | unknown function | 1 | 40401 | 41117 |
| ASX99218.1 | MF185725_p100 | hypothetical protein | phrog_9956 | unknown function | unknown function | 1 | 63495 | 63878 |
| ASX99168.1 | MF185725_p48 | hypothetical protein | phrog_9097 | unknown function | unknown function | 1 | 38416 | 38568 |
| ASX99175.1 | MF185725_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41586 | 41858 |
| ASX99225.1 | MF185725_p107 | hypothetical protein | phrog_8795 | unknown function | unknown function | 1 | 67756 | 68103 |
| ASX99203.1 | MF185725_p84 | hypothetical protein | phrog_8619 | unknown function | unknown function | 1 | 56186 | 56758 |
| ASX99227.1 | MF185725_p109 | hypothetical protein | phrog_9617 | unknown function | unknown function | 1 | 68840 | 69133 |
| ASX99205.1 | MF185725_p86 | hypothetical protein | phrog_8751 | unknown function | unknown function | 1 | 57179 | 57538 |
| ASX99226.1 | MF185725_p108 | hypothetical protein | phrog_8530 | unknown function | unknown function | 1 | 68176 | 68568 |
| ASX99185.1 | MF185725_p65 | hypothetical protein | phrog_7014 | unknown function | unknown function | 1 | 45332 | 45505 |
| ASX99142.1 | MF185725_p22 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 15729 | 19265 |
| ASX99148.1 | MF185725_p28 | hypothetical protein | phrog_4565 | unknown function | unknown function | 1 | 25647 | 25934 |
| ASX99192.1 | MF185725_p73 | endolysin domain protein | phrog_8605 | endolysin | lysis | 1 | 48296 | 48763 |
| ASX99230.1 | MF185725_p71 | hypothetical protein | phrog_10249 | unknown function | unknown function | 1 | 47631 | 47861 |
| ASX99147.1 | MF185725_p27 | tail protein | phrog_5231 | unknown function | unknown function | 1 | 23710 | 25647 |
| ASX99141.1 | MF185725_p21 | hypothetical protein | phrog_8820 | unknown function | unknown function | 1 | 15585 | 15713 |
| ASX99181.1 | MF185725_p61 | hypothetical protein | phrog_8799 | unknown function | unknown function | 1 | 43691 | 44653 |
| ASX99160.1 | MF185725_p40 | hypothetical protein | phrog_7455 | tail protein | tail | 1 | 31959 | 33824 |
| ASX99194.1 | MF185725_p75 | hypothetical protein | phrog_9127 | unknown function | unknown function | 1 | 49297 | 49464 |
| ASX99122.1 | MF185725_p2 | hypothetical protein | phrog_645 | Rnase E | DNA, RNA and nucleotide metabolism | 1 | 657 | 1310 |
| ASX99138.1 | MF185725_p18 | tail sheath protein | phrog_23 | tail sheath | tail | 1 | 12901 | 14349 |
| ASX99212.1 | MF185725_p93 | glycosidase | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 60999 | 61361 |
| ASX99179.1 | MF185725_p59 | hypothetical protein | phrog_8327 | unknown function | unknown function | 1 | 42955 | 43458 |
| ASX99174.1 | MF185725_p54 | hypothetical protein | phrog_8694 | unknown function | unknown function | 1 | 41114 | 41578 |
| ASX99198.1 | MF185725_p79 | hypothetical protein | phrog_8725 | unknown function | unknown function | 1 | 50489 | 51565 |
| ASX99202.1 | MF185725_p83 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 54206 | 56128 |
| ASX99121.1 | MF185725_p1 | hypothetical protein | phrog_5264 | unknown function | unknown function | 1 | 1 | 660 |
| ASX99161.1 | MF185725_p41 | hypothetical protein | phrog_9333 | unknown function | unknown function | 1 | 34045 | 34284 |
| ASX99146.1 | MF185725_p26 | tail protein | phrog_5207 | unknown function | unknown function | 1 | 21687 | 23657 |
| ASX99228.1 | MF185725_p110 | hypothetical protein | phrog_8478 | amidase | lysis | 1 | 69162 | 69713 |
| ASX99195.1 | MF185725_p76 | hypothetical protein | phrog_9916 | unknown function | unknown function | 1 | 49461 | 49697 |
| ASX99188.1 | MF185725_p68 | hypothetical protein | phrog_9166 | unknown function | unknown function | 1 | 45814 | 46332 |
| ASX99157.1 | MF185725_p37 | HTH DNA binding protein | phrog_597 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 30167 | 30385 |
| ASX99128.1 | MF185725_p8 | hypothetical protein | phrog_10034 | unknown function | unknown function | 1 | 6966 | 7421 |
| ASX99199.1 | MF185725_p80 | hypothetical protein | phrog_6326 | unknown function | unknown function | 1 | 51562 | 51954 |
| ASX99137.1 | MF185725_p17 | hypothetical protein | phrog_8507 | unknown function | unknown function | 1 | 12616 | 12897 |
| ASX99224.1 | MF185725_p106 | DNA polymerase III beta subunit | phrog_947 | DNA polymerase processivity factor | DNA, RNA and nucleotide metabolism | 1 | 66518 | 67633 |
| ASX99201.1 | MF185725_p82 | DNA methyltransferase domain protein | phrog_1008 | DNA methyltransferase | other | 1 | 52853 | 54130 |
| ASX99183.1 | MF185725_p63 | hypothetical protein | phrog_19977 | unknown function | unknown function | 1 | 44754 | 44942 |
| ASX99129.1 | MF185725_p9 | hypothetical protein | phrog_8348 | unknown function | unknown function | 1 | 7429 | 7812 |
| ASX99207.1 | MF185725_p88 | hypothetical protein | phrog_8410 | unknown function | unknown function | 1 | 57970 | 58269 |
| ASX99126.1 | MF185725_p6 | hypothetical protein | phrog_3585 | immunity protein | other | 1 | 6253 | 6579 |
| ASX99131.1 | MF185725_p11 | head decoration | phrog_673 | head scaffolding protein | head and packaging | 1 | 9277 | 9657 |
| ASX99210.1 | MF185725_p91 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 59055 | 60800 |
| ASX99191.1 | MF185725_p72 | hypothetical protein | phrog_8715 | unknown function | unknown function | 1 | 47875 | 48303 |
| ASX99189.1 | MF185725_p69 | hypothetical protein | phrog_4657 | unknown function | unknown function | 1 | 46329 | 47186 |
| ASX99222.1 | MF185725_p104 | hypothetical protein | phrog_8556 | unknown function | unknown function | 1 | 65453 | 66178 |
| ASX99124.1 | MF185725_p4 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 2813 | 4237 |
| ASX99172.1 | MF185725_p52 | hypothetical protein | phrog_8385 | unknown function | unknown function | 1 | 40045 | 40404 |
| ASX99216.1 | MF185725_p97 | hypothetical protein | phrog_8648 | unknown function | unknown function | 1 | 62635 | 62832 |
| ASX99140.1 | MF185725_p20 | hypothetical protein | phrog_5088 | tail assembly chaperone | tail | 1 | 14908 | 15531 |
| ASX99182.1 | MF185725_p62 | hypothetical protein | phrog_19512 | unknown function | unknown function | 1 | 44650 | 44757 |
| ASX99204.1 | MF185725_p85 | hypothetical protein | phrog_8502 | unknown function | unknown function | 1 | 56755 | 57192 |
| ASX99178.1 | MF185725_p58 | hypothetical protein | phrog_2864 | unknown function | unknown function | 1 | 42767 | 42958 |
| ASX99190.1 | MF185725_p70 | hypothetical protein | phrog_8388 | unknown function | unknown function | 1 | 47183 | 47608 |
| ASX99221.1 | MF185725_p103 | hypothetical protein | singleton | unknown function | unknown function | 1 | 65124 | 65411 |
| ASX99163.1 | MF185725_p43 | ATPase-like domain protein | phrog_1499 | unknown function | unknown function | 1 | 34536 | 35771 |
| ASX99169.1 | MF185725_p49 | hypothetical protein | phrog_9387 | unknown function | unknown function | 1 | 38571 | 38837 |
| ASX99123.1 | MF185725_p3 | terminase | phrog_2 | terminase large subunit | head and packaging | 1 | 1291 | 2769 |
| ASX99193.1 | MF185725_p74 | hypothetical protein | phrog_8686 | unknown function | unknown function | 1 | 48753 | 49310 |
| ASX99223.1 | MF185725_p105 | hypothetical protein | phrog_8433 | unknown function | unknown function | 1 | 66266 | 66505 |
| ASX99180.1 | MF185725_p60 | hypothetical protein | phrog_8413 | unknown function | unknown function | 1 | 43451 | 43690 |
| ASX99153.1 | MF185725_p33 | hypothetical protein | phrog_1933 | unknown function | unknown function | -1 | 28741 | 28959 |
| ASX99186.1 | MF185725_p66 | hypothetical protein | phrog_8876 | unknown function | unknown function | 1 | 45489 | 45677 |
| ASX99125.1 | MF185725_p5 | head assembly protein | phrog_595 | head maturation protease | head and packaging | 1 | 4243 | 6222 |
| ASX99155.1 | MF185725_p35 | hypothetical protein | phrog_9254 | unknown function | unknown function | -1 | 29208 | 29519 |
| ASX99208.1 | MF185725_p89 | hypothetical protein | phrog_8675 | unknown function | unknown function | 1 | 58330 | 58653 |
| ASX99136.1 | MF185725_p16 | hypothetical protein | phrog_5178 | unknown function | unknown function | 1 | 11980 | 12597 |
| ASX99164.1 | MF185725_p44 | helix-turn-helix DNA binding domain protein | phrog_8615 | unknown function | unknown function | 1 | 35774 | 36028 |
| ASX99165.1 | MF185725_p45 | hypothetical protein | phrog_8731 | unknown function | unknown function | 1 | 36053 | 36475 |
| ASX99215.1 | MF185725_p96 | RusA | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 62229 | 62642 |
| ASX99143.1 | MF185725_p23 | LysM domain protein | phrog_380 | endolysin | lysis | 1 | 19266 | 19934 |
| ASX99127.1 | MF185725_p7 | hypothetical protein | phrog_9140 | unknown function | unknown function | 1 | 6724 | 6954 |
| ASX99219.1 | MF185725_p101 | HNH endonuclease | phrog_826 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 63868 | 64362 |
| ASX99158.1 | MF185725_p38 | baseplate wedge subunit | phrog_5026 | baseplate protein | tail | 1 | 30497 | 30835 |
| ASX99144.1 | MF185725_p24 | tail protein | phrog_52 | tail protein | tail | 1 | 19940 | 21283 |
| ASX99171.1 | MF185725_p51 | hypothetical protein | phrog_3926 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 39219 | 39737 |
| ASX99214.1 | MF185725_p95 | hypothetical protein | phrog_9161 | unknown function | unknown function | 1 | 61961 | 62242 |
| ASX99167.1 | MF185725_p47 | recombinase | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 37422 | 38381 |
| ASX99209.1 | MF185725_p90 | PD-(D/E) XK-like restriction enzyme | phrog_5928 | unknown function | unknown function | 1 | 58684 | 59058 |