| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF185726 |
Definition |
Mycobacterium phage Appletree2, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bronvirus; unclassified Bronvirus. |
DB of origin |
NUCCORE |
Length |
73808 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
125 |
%GC |
58.92 |
Number of singletons |
2 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASR86066.1 | MF185726_p83 | hypothetical protein | phrog_17756 | unknown function | unknown function | 1 | 53802 | 54044 |
| ASR86060.1 | MF185726_p77 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 51620 | 51925 |
| ASR86013.1 | MF185726_p30 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 27633 | 27902 |
| ASR86004.1 | MF185726_p21 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 21628 | 22803 |
| ASR86063.1 | MF185726_p80 | hypothetical protein | phrog_1568 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 52577 | 53143 |
| ASR85990.1 | MF185726_p7 | scaffolding protein | phrog_3760 | head scaffolding protein | head and packaging | 1 | 5403 | 6014 |
| ASR86045.1 | MF185726_p62 | hypothetical protein | phrog_18858 | unknown function | unknown function | 1 | 43757 | 43894 |
| ASR86036.1 | MF185726_p53 | hypothetical protein | phrog_4670 | unknown function | unknown function | 1 | 40440 | 40571 |
| ASR86105.1 | MF185726_p95 | hypothetical protein | phrog_6821 | unknown function | unknown function | 1 | 59379 | 59588 |
| ASR86091.1 | MF185726_p112 | hypothetical protein | phrog_1909 | unknown function | unknown function | -1 | 65457 | 66299 |
| ASR86033.1 | MF185726_p50 | hypothetical protein | phrog_22974 | unknown function | unknown function | 1 | 38316 | 38429 |
| ASR86090.1 | MF185726_p110 | hypothetical protein | phrog_20355 | unknown function | unknown function | -1 | 64991 | 65200 |
| ASR86006.1 | MF185726_p23 | hypothetical protein | phrog_17217 | unknown function | unknown function | 1 | 23208 | 23381 |
| ASR86043.1 | MF185726_p60 | hypothetical protein | phrog_1123 | unknown function | unknown function | 1 | 42652 | 42999 |
| ASR86022.1 | MF185726_p39 | excisionase | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 33269 | 33478 |
| ASR86051.1 | MF185726_p68 | hypothetical protein | phrog_1821 | transcriptional regulator WhiB-like | transcription regulation | 1 | 46946 | 47170 |
| ASR85987.1 | MF185726_p4 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 1025 | 2608 |
| ASR86037.1 | MF185726_p54 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 40568 | 40909 |
| ASR86058.1 | MF185726_p75 | hypothetical protein | phrog_6064 | unknown function | unknown function | 1 | 51046 | 51258 |
| ASR86106.1 | MF185726_p100 | hypothetical protein | phrog_17151 | unknown function | unknown function | 1 | 60694 | 60783 |
| ASR86016.1 | MF185726_p33 | DNA bridging protein | phrog_1223 | nucloid associated Lsr2-like | DNA, RNA and nucleotide metabolism | -1 | 29011 | 29439 |
| ASR86087.1 | MF185726_p107 | hypothetical protein | phrog_7382 | unknown function | unknown function | -1 | 63754 | 64050 |
| ASR85995.1 | MF185726_p12 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 8447 | 8935 |
| ASR86011.1 | MF185726_p28 | hypothetical protein | phrog_5807 | unknown function | unknown function | 1 | 26965 | 27219 |
| ASR86075.1 | MF185726_p93 | DNA polymerase III | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 58235 | 59014 |
| ASR86019.1 | MF185726_p36 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 31534 | 32316 |
| ASR85988.1 | MF185726_p5 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2598 | 4271 |
| ASR86056.1 | MF185726_p73 | hypothetical protein | phrog_16637 | unknown function | unknown function | 1 | 49881 | 50129 |
| ASR86108.1 | MF185726_p115 | hypothetical protein | phrog_7390 | unknown function | unknown function | -1 | 66976 | 67245 |
| ASR85994.1 | MF185726_p11 | head-to-tail connector protein | phrog_5775 | head-tail connector protein | connector | 1 | 8007 | 8438 |
| ASR86007.1 | MF185726_p24 | hypothetical protein | phrog_3856 | minor tail protein | tail | 1 | 23374 | 24312 |
| ASR86026.1 | MF185726_p43 | hypothetical protein | phrog_21835 | unknown function | unknown function | 1 | 34656 | 34793 |
| ASR86017.1 | MF185726_p34 | hypothetical protein | phrog_33480 | unknown function | unknown function | -1 | 29488 | 29649 |
| ASR86099.1 | MF185726_p121 | hypothetical protein | phrog_24745 | unknown function | unknown function | 1 | 71626 | 71784 |
| ASR85996.1 | MF185726_p13 | major tail protein | phrog_476 | major tail protein | tail | 1 | 8963 | 9865 |
| ASR86092.1 | MF185726_p113 | hypothetical protein | phrog_3777 | unknown function | unknown function | -1 | 66370 | 66750 |
| ASR86074.1 | MF185726_p92 | hypothetical protein | phrog_4472 | nucleotide kinase | other | 1 | 57876 | 58238 |
| ASR86025.1 | MF185726_p42 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 33952 | 34368 |
| ASR86065.1 | MF185726_p82 | hypothetical protein | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 53587 | 53805 |
| ASR86086.1 | MF185726_p106 | hypothetical protein | phrog_17448 | unknown function | unknown function | -1 | 63353 | 63649 |
| ASR86103.1 | MF185726_p125 | hypothetical protein | phrog_21310 | unknown function | unknown function | -1 | 73397 | 73603 |
| ASR86034.1 | MF185726_p51 | hypothetical protein | phrog_1673 | unknown function | unknown function | 1 | 38416 | 38649 |
| ASR86032.1 | MF185726_p49 | hypothetical protein | phrog_4870 | unknown function | unknown function | 1 | 37838 | 38254 |
| ASR86035.1 | MF185726_p52 | hypothetical protein | phrog_850 | RNA-binding protein | DNA, RNA and nucleotide metabolism | 1 | 38659 | 40077 |
| ASR86054.1 | MF185726_p71 | phosphoribosylpyrophosphatase | phrog_619 | ribose-phosphate pyrophosphokinase | other | 1 | 47458 | 48309 |
| ASR85997.1 | MF185726_p15 | tail assembly chaperone | phrog_4464 | tail assembly chaperone | tail | 1 | 9954 | 10256 |
| ASR86084.1 | MF185726_p104 | hypothetical protein | phrog_940 | nuclease | DNA, RNA and nucleotide metabolism | 1 | 62268 | 62978 |
| ASR86096.1 | MF185726_p118 | hypothetical protein | phrog_6176 | unknown function | unknown function | 1 | 67828 | 68286 |
| ASR86093.1 | MF185726_p114 | hypothetical protein | phrog_6224 | unknown function | unknown function | -1 | 66777 | 67010 |
| ASR86107.1 | MF185726_p111 | hypothetical protein | phrog_6230 | unknown function | unknown function | -1 | 65200 | 65427 |
| ASR86068.1 | MF185726_p85 | RNA ligase | phrog_968 | RNA ligase | DNA, RNA and nucleotide metabolism | 1 | 54600 | 55874 |
| ASR86042.1 | MF185726_p59 | exonuclease | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 41937 | 42671 |
| ASR86057.1 | MF185726_p74 | polynucleotide kinase | phrog_505 | polynucleotide kinase | other | 1 | 50126 | 51046 |
| ASR86023.1 | MF185726_p40 | hypothetical protein | phrog_762 | unknown function | unknown function | 1 | 33475 | 33870 |
| ASR86027.1 | MF185726_p44 | hypothetical protein | phrog_5916 | unknown function | unknown function | 1 | 34865 | 35230 |
| ASR86076.1 | MF185726_p94 | hypothetical protein | phrog_6910 | unknown function | unknown function | 1 | 59026 | 59382 |
| ASR86041.1 | MF185726_p58 | hypothetical protein | phrog_18302 | unknown function | unknown function | 1 | 41505 | 41687 |
| ASR86002.1 | MF185726_p19 | minor tail protein | phrog_4413 | minor tail protein | tail | 1 | 18493 | 18939 |
| ASR86055.1 | MF185726_p72 | nicotinamide phosphoribosyltransferase | phrog_448 | nicotinamide phosphoribosyl transferase | other | 1 | 48306 | 49781 |
| ASR86080.1 | MF185726_p99 | hypothetical protein | phrog_6800 | unknown function | unknown function | 1 | 60512 | 60694 |
| ASR86070.1 | MF185726_p87 | hypothetical protein | phrog_7890 | unknown function | unknown function | 1 | 56360 | 56467 |
| ASR86018.1 | MF185726_p35 | integrase | phrog_1 | integrase | integration and excision | 1 | 30226 | 31533 |
| ASR86038.1 | MF185726_p55 | hypothetical protein | phrog_5872 | unknown function | unknown function | 1 | 40893 | 41168 |
| ASR86001.1 | MF185726_p18 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 16636 | 18468 |
| ASR86048.1 | MF185726_p65 | hypothetical protein | phrog_8425 | unknown function | unknown function | 1 | 44465 | 44698 |
| ASR86062.1 | MF185726_p79 | hypothetical protein | phrog_1941 | unknown function | unknown function | 1 | 52253 | 52495 |
| ASR86052.1 | MF185726_p69 | hypothetical protein | phrog_6624 | unknown function | unknown function | 1 | 47154 | 47336 |
| ASR86067.1 | MF185726_p84 | hypothetical protein | phrog_289 | GTP-binding domain | other | 1 | 54041 | 54460 |
| ASR85989.1 | MF185726_p6 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 4294 | 5349 |
| ASR85993.1 | MF185726_p10 | head-to-tail connector protein | phrog_5309 | head-tail adaptor | connector | 1 | 7684 | 8007 |
| ASR85991.1 | MF185726_p8 | major capsid protein | phrog_283 | major head protein | head and packaging | 1 | 6058 | 7209 |
| ASR86072.1 | MF185726_p90 | HNH endonuclease | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 57125 | 57535 |
| ASR86098.1 | MF185726_p120 | AAA-ATPase | phrog_249 | porphyrin biosynthesis | moron, auxiliary metabolic gene and host takeover | -1 | 70336 | 71580 |
| ASR85985.1 | MF185726_p2 | terminase small subunit | phrog_1496 | terminase small subunit | head and packaging | 1 | 456 | 821 |
| ASR86021.1 | MF185726_p38 | CRO protein | phrog_1702 | transcriptional repressor | transcription regulation | 1 | 32985 | 33272 |
| ASR86008.1 | MF185726_p25 | lysin A | phrog_700 | endolysin | lysis | 1 | 24318 | 25490 |
| ASR86028.1 | MF185726_p45 | esterase | phrog_1649 | metallo-phosphoesterase | other | 1 | 35232 | 36320 |
| ASR86039.1 | MF185726_p56 | hypothetical protein | phrog_20434 | unknown function | unknown function | 1 | 41165 | 41326 |
| ASR85999.1 | MF185726_p16 | tape measure protein | phrog_3547 | tail length tape measure protein | tail | 1 | 10810 | 15729 |
| ASR86094.1 | MF185726_p116 | hypothetical protein | phrog_6004 | unknown function | unknown function | -1 | 67255 | 67518 |
| ASR86073.1 | MF185726_p91 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 57640 | 57879 |
| ASR86053.1 | MF185726_p70 | hypothetical protein | phrog_6206 | unknown function | unknown function | 1 | 47330 | 47473 |
| ASR86047.1 | MF185726_p64 | hypothetical protein | phrog_1389 | unknown function | unknown function | 1 | 44100 | 44468 |
| ASR86077.1 | MF185726_p96 | hypothetical protein | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 59711 | 60133 |
| ASR86061.1 | MF185726_p78 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 51928 | 52263 |
| ASR86020.1 | MF185726_p37 | hypothetical protein | phrog_1746 | transcriptional repressor | transcription regulation | -1 | 32467 | 32877 |
| ASR85992.1 | MF185726_p9 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 7220 | 7687 |
| ASR86029.1 | MF185726_p46 | hypothetical protein | phrog_6017 | unknown function | unknown function | 1 | 36310 | 36627 |
| ASR86064.1 | MF185726_p81 | ssDNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 53136 | 53519 |
| ASR86031.1 | MF185726_p48 | hypothetical protein | phrog_200 | lipoprotein | other | 1 | 36860 | 37738 |
| ASR85986.1 | MF185726_p3 | hypothetical protein | phrog_6976 | unknown function | unknown function | 1 | 822 | 1025 |
| ASR86081.1 | MF185726_p101 | hypothetical protein | phrog_10290 | unknown function | unknown function | 1 | 60953 | 61117 |
| ASR86024.1 | MF185726_p41 | hypothetical protein | phrog_8707 | unknown function | unknown function | 1 | 33845 | 33955 |
| ASR86078.1 | MF185726_p97 | hypothetical protein | phrog_3699 | unknown function | unknown function | 1 | 60133 | 60357 |
| ASR86015.1 | MF185726_p32 | nucleotidyltransferase | phrog_388 | nucleotidyltransferase | DNA, RNA and nucleotide metabolism | -1 | 28174 | 28926 |
| ASR86010.1 | MF185726_p27 | holin | phrog_5963 | holin | lysis | 1 | 26522 | 26965 |
| ASR86102.1 | MF185726_p124 | hypothetical protein | phrog_7398 | unknown function | unknown function | -1 | 72511 | 73023 |
| ASR86046.1 | MF185726_p63 | hypothetical protein | phrog_5917 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 43894 | 44085 |
| ASR86089.1 | MF185726_p109 | hypothetical protein | phrog_4776 | unknown function | unknown function | -1 | 64237 | 64974 |
| ASR86014.1 | MF185726_p31 | hypothetical protein | phrog_10321 | unknown function | unknown function | -1 | 27971 | 28177 |
| ASR86049.1 | MF185726_p66 | hypothetical protein | phrog_1882 | unknown function | unknown function | 1 | 44999 | 45676 |
| ASR86104.1 | MF185726_p89 | hypothetical protein | phrog_1969 | unknown function | unknown function | 1 | 56738 | 57088 |
| ASR86059.1 | MF185726_p76 | hypothetical protein | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 51259 | 51672 |
| ASR86097.1 | MF185726_p119 | hypothetical protein | phrog_1909 | unknown function | unknown function | -1 | 69241 | 70113 |
| ASR86079.1 | MF185726_p98 | hypothetical protein | phrog_6027 | unknown function | unknown function | 1 | 60350 | 60469 |
| ASR86030.1 | MF185726_p47 | hypothetical protein | phrog_7316 | unknown function | unknown function | 1 | 36575 | 36772 |
| ASR86069.1 | MF185726_p86 | hypothetical protein | phrog_17990 | unknown function | unknown function | 1 | 55871 | 56359 |
| ASR86040.1 | MF185726_p57 | hypothetical protein | phrog_5858 | unknown function | unknown function | 1 | 41327 | 41512 |
| ASR86085.1 | MF185726_p105 | hypothetical protein | phrog_6170 | unknown function | unknown function | 1 | 62965 | 63309 |
| ASR86082.1 | MF185726_p102 | hypothetical protein | phrog_24455 | unknown function | unknown function | 1 | 61493 | 61801 |
| ASR86012.1 | MF185726_p29 | hypothetical protein | phrog_726 | unknown function | unknown function | 1 | 27223 | 27642 |
| ASR86088.1 | MF185726_p108 | hypothetical protein | phrog_2869 | unknown function | unknown function | -1 | 64062 | 64235 |
| ASR86005.1 | MF185726_p22 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 22816 | 23199 |
| ASR86100.1 | MF185726_p122 | hypothetical protein | singleton | unknown function | unknown function | -1 | 71823 | 71996 |
| ASR86101.1 | MF185726_p123 | hypothetical protein | phrog_7225 | unknown function | unknown function | -1 | 72188 | 72409 |
| ASR85984.1 | MF185726_p1 | hypothetical protein | phrog_7082 | unknown function | unknown function | 1 | 80 | 463 |
| ASR86003.1 | MF185726_p20 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 18940 | 21621 |
| ASR86050.1 | MF185726_p67 | DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 45673 | 46938 |
| ASR86044.1 | MF185726_p61 | hypothetical protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 42996 | 43757 |
| ASR86083.1 | MF185726_p103 | hypothetical protein | singleton | unknown function | unknown function | 1 | 61798 | 62004 |
| ASR86071.1 | MF185726_p88 | hypothetical protein | phrog_2218 | unknown function | unknown function | 1 | 56464 | 56748 |
| ASR85998.1 | MF185726_p14 | tail assembly chaperone | phrog_2624 | tail assembly chaperone | tail | 1 | 9954 | 10780 |
| ASR86000.1 | MF185726_p17 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 15800 | 16699 |
| ASR86095.1 | MF185726_p117 | hypothetical protein | phrog_6968 | unknown function | unknown function | -1 | 67558 | 67767 |
| ASR86009.1 | MF185726_p26 | lysin B | phrog_102 | endolysin | lysis | 1 | 25490 | 26521 |