| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF185728 |
Definition |
Mycobacterium phage Finemlucis, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bronvirus; unclassified Bronvirus. |
DB of origin |
NUCCORE |
Length |
77031 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
131 |
%GC |
58.85 |
Number of singletons |
5 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATG86480.1 | MF185728_p69 | hypothetical protein | phrog_1882 | unknown function | unknown function | 1 | 47224 | 47904 |
| ATG86532.1 | MF185728_p121 | hypothetical protein | phrog_6224 | unknown function | unknown function | -1 | 70432 | 70665 |
| ATG86489.1 | MF185728_p78 | hypothetical protein | phrog_6064 | unknown function | unknown function | 1 | 53631 | 53867 |
| ATG86522.1 | MF185728_p111 | hypothetical protein | phrog_2124 | unknown function | unknown function | -1 | 66863 | 67003 |
| ATG86444.1 | MF185728_p33 | hypothetical protein | phrog_6558 | unknown function | unknown function | -1 | 29034 | 29378 |
| ATG86494.1 | MF185728_p83 | hypothetical protein | phrog_1568 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 55392 | 55946 |
| ATG86435.1 | MF185728_p24 | minor tail protein | phrog_9784 | minor tail protein | tail | 1 | 21945 | 24233 |
| ATG86440.1 | MF185728_p29 | hypothetical protein | phrog_5963 | holin | lysis | 1 | 27555 | 28028 |
| ATG86459.1 | MF185728_p48 | hypothetical protein | phrog_9705 | unknown function | unknown function | 1 | 37905 | 38240 |
| ATG86415.1 | MF185728_p4 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 1069 | 2637 |
| ATG86529.1 | MF185728_p118 | hypothetical protein | phrog_6230 | unknown function | unknown function | -1 | 68802 | 69047 |
| ATG86438.1 | MF185728_p27 | lysin A | phrog_700 | endolysin | lysis | 1 | 25356 | 26525 |
| ATG86418.1 | MF185728_p7 | scaffolding protein | phrog_3760 | head scaffolding protein | head and packaging | 1 | 5422 | 6027 |
| ATG86471.1 | MF185728_p60 | hypothetical protein | phrog_7425 | unknown function | unknown function | 1 | 43572 | 43775 |
| ATG86535.1 | MF185728_p124 | hypothetical protein | singleton | unknown function | unknown function | -1 | 71317 | 71451 |
| ATG86420.1 | MF185728_p9 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 7231 | 7695 |
| ATG86508.1 | MF185728_p97 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 61077 | 61337 |
| ATG86519.1 | MF185728_p108 | hypothetical protein | phrog_940 | nuclease | DNA, RNA and nucleotide metabolism | 1 | 65563 | 66252 |
| ATG86466.1 | MF185728_p55 | RNA binding protein | phrog_850 | RNA-binding protein | DNA, RNA and nucleotide metabolism | 1 | 40841 | 42271 |
| ATG86509.1 | MF185728_p98 | hypothetical protein | phrog_4472 | nucleotide kinase | other | 1 | 61312 | 61680 |
| ATG86437.1 | MF185728_p26 | hypothetical protein | phrog_3856 | minor tail protein | tail | 1 | 24415 | 25356 |
| ATG86493.1 | MF185728_p82 | hypothetical protein | phrog_1941 | unknown function | unknown function | 1 | 55077 | 55313 |
| ATG86443.1 | MF185728_p32 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 28698 | 28964 |
| ATG86425.1 | MF185728_p14 | tail assembly chaperone | phrog_2624 | tail assembly chaperone | tail | 1 | 9991 | 10814 |
| ATG86498.1 | MF185728_p87 | hypothetical protein | phrog_289 | GTP-binding domain | other | 1 | 56813 | 57238 |
| ATG86484.1 | MF185728_p73 | hypothetical protein | singleton | unknown function | unknown function | 1 | 49850 | 50056 |
| ATG86470.1 | MF185728_p59 | hypothetical protein | phrog_5858 | unknown function | unknown function | 1 | 43403 | 43579 |
| ATG86439.1 | MF185728_p28 | lysin B | phrog_102 | endolysin | lysis | 1 | 26525 | 27553 |
| ATG86413.1 | MF185728_p2 | terminase small subunit | phrog_1496 | terminase small subunit | head and packaging | 1 | 477 | 866 |
| ATG86430.1 | MF185728_p19 | minor tail protein | phrog_4413 | minor tail protein | tail | 1 | 18755 | 19252 |
| ATG86518.1 | MF185728_p107 | hypothetical protein | phrog_2255 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 64195 | 64869 |
| ATG86523.1 | MF185728_p112 | hypothetical protein | phrog_2869 | unknown function | unknown function | -1 | 67082 | 67273 |
| ATG86428.1 | MF185728_p17 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 16080 | 16994 |
| ATG86457.1 | MF185728_p46 | hypothetical protein | phrog_5916 | unknown function | unknown function | 1 | 36532 | 36897 |
| ATG86513.1 | MF185728_p102 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 62772 | 63194 |
| ATG86423.1 | MF185728_p12 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 8471 | 8974 |
| ATG86499.1 | MF185728_p88 | hypothetical protein | singleton | unknown function | unknown function | 1 | 57239 | 57331 |
| ATG86426.1 | MF185728_p15 | tail assembly chaperone | phrog_4464 | tail assembly chaperone | tail | 1 | 9991 | 10290 |
| ATG86433.1 | MF185728_p22 | hypothetical protein | phrog_4137 | unknown function | unknown function | 1 | 21198 | 21473 |
| ATG86469.1 | MF185728_p58 | hypothetical protein | phrog_5872 | unknown function | unknown function | 1 | 43089 | 43406 |
| ATG86492.1 | MF185728_p81 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 54683 | 55087 |
| ATG86510.1 | MF185728_p99 | DNA polymerase III subunit | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 61677 | 62459 |
| ATG86431.1 | MF185728_p20 | minor tail protein | phrog_2689 | minor tail protein | tail | 1 | 19236 | 21032 |
| ATG86465.1 | MF185728_p54 | hypothetical protein | phrog_2380 | unknown function | unknown function | 1 | 40486 | 40725 |
| ATG86506.1 | MF185728_p95 | hypothetical protein | phrog_1969 | unknown function | unknown function | 1 | 60180 | 60518 |
| ATG86473.1 | MF185728_p62 | hypothetical protein | phrog_1123 | unknown function | unknown function | 1 | 44730 | 45044 |
| ATG86427.1 | MF185728_p16 | tape measure protein | phrog_3547 | tail length tape measure protein | tail | 1 | 10856 | 15991 |
| ATG86468.1 | MF185728_p57 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 42764 | 43099 |
| ATG86488.1 | MF185728_p77 | hypothetical protein | phrog_7155 | unknown function | unknown function | 1 | 53398 | 53631 |
| ATG86462.1 | MF185728_p51 | hypothetical protein | phrog_9674 | unknown function | unknown function | 1 | 38717 | 38845 |
| ATG86521.1 | MF185728_p110 | hypothetical protein | phrog_10010 | unknown function | unknown function | -1 | 66687 | 66866 |
| ATG86497.1 | MF185728_p86 | hypothetical protein | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 56607 | 56825 |
| ATG86445.1 | MF185728_p34 | hypothetical protein | phrog_9776 | unknown function | unknown function | -1 | 29384 | 29671 |
| ATG86448.1 | MF185728_p37 | hypothetical protein | phrog_10128 | unknown function | unknown function | -1 | 31027 | 31326 |
| ATG86504.1 | MF185728_p93 | hypothetical protein | phrog_7890 | unknown function | unknown function | 1 | 59858 | 59962 |
| ATG86483.1 | MF185728_p72 | hypothetical protein | phrog_1821 | transcriptional regulator WhiB-like | transcription regulation | 1 | 49587 | 49817 |
| ATG86477.1 | MF185728_p66 | hypothetical protein | phrog_1389 | unknown function | unknown function | 1 | 46278 | 46637 |
| ATG86538.1 | MF185728_p127 | AAA-ATPase | phrog_249 | porphyrin biosynthesis | moron, auxiliary metabolic gene and host takeover | -1 | 73836 | 75074 |
| ATG86490.1 | MF185728_p79 | resolvase | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 54025 | 54423 |
| ATG86533.1 | MF185728_p122 | hypothetical protein | phrog_6004 | unknown function | unknown function | -1 | 70914 | 71177 |
| ATG86517.1 | MF185728_p106 | hypothetical protein | phrog_10206 | unknown function | unknown function | 1 | 63909 | 64043 |
| ATG86464.1 | MF185728_p53 | hypothetical protein | phrog_4870 | unknown function | unknown function | 1 | 40066 | 40485 |
| ATG86453.1 | MF185728_p42 | hypothetical protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 34970 | 35185 |
| ATG86461.1 | MF185728_p50 | hypothetical protein | phrog_7316 | unknown function | unknown function | 1 | 38552 | 38680 |
| ATG86467.1 | MF185728_p56 | hypothetical protein | phrog_4670 | unknown function | unknown function | 1 | 42640 | 42771 |
| ATG86422.1 | MF185728_p11 | head-to-tail connector protein | phrog_5775 | head-tail connector protein | connector | 1 | 8030 | 8461 |
| ATG86421.1 | MF185728_p10 | head-to-tail connector protein | phrog_5309 | head-tail adaptor | connector | 1 | 7692 | 8030 |
| ATG86449.1 | MF185728_p38 | integrase | phrog_1 | integrase | integration and excision | 1 | 31932 | 33239 |
| ATG86534.1 | MF185728_p123 | hypothetical protein | phrog_8547 | unknown function | unknown function | -1 | 71181 | 71315 |
| ATG86429.1 | MF185728_p18 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 16995 | 18728 |
| ATG86520.1 | MF185728_p109 | hypothetical protein | phrog_6170 | unknown function | unknown function | 1 | 66263 | 66613 |
| ATG86496.1 | MF185728_p85 | ssDNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 56160 | 56546 |
| ATG86514.1 | MF185728_p103 | hypothetical protein | phrog_3699 | unknown function | unknown function | 1 | 63293 | 63511 |
| ATG86512.1 | MF185728_p101 | hypothetical protein | phrog_2057 | unknown function | unknown function | 1 | 62639 | 62809 |
| ATG86495.1 | MF185728_p84 | hypothetical protein | singleton | unknown function | unknown function | 1 | 55943 | 56167 |
| ATG86531.1 | MF185728_p120 | hypothetical protein | phrog_3777 | unknown function | unknown function | -1 | 70024 | 70398 |
| ATG86416.1 | MF185728_p5 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2638 | 4293 |
| ATG86501.1 | MF185728_p90 | hypothetical protein | phrog_3641 | unknown function | unknown function | 1 | 58613 | 58783 |
| ATG86500.1 | MF185728_p89 | RNA ligase | phrog_968 | RNA ligase | DNA, RNA and nucleotide metabolism | 1 | 57328 | 58605 |
| ATG86485.1 | MF185728_p74 | phosphoribosyl pyrophosphate synthetase | phrog_619 | ribose-phosphate pyrophosphokinase | other | 1 | 50041 | 50904 |
| ATG86474.1 | MF185728_p63 | ssDNA binding protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 45045 | 45800 |
| ATG86536.1 | MF185728_p125 | hypothetical protein | phrog_6176 | unknown function | unknown function | 1 | 71580 | 72062 |
| ATG86417.1 | MF185728_p6 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 4311 | 5369 |
| ATG86507.1 | MF185728_p96 | HNH endonuclease | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 60566 | 60979 |
| ATG86463.1 | MF185728_p52 | band-7-like membrane protein | phrog_200 | lipoprotein | other | 1 | 38933 | 39892 |
| ATG86526.1 | MF185728_p115 | hypothetical protein | phrog_14583 | unknown function | unknown function | -1 | 68011 | 68538 |
| ATG86414.1 | MF185728_p3 | hypothetical protein | phrog_6976 | unknown function | unknown function | 1 | 866 | 1069 |
| ATG86478.1 | MF185728_p67 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 46684 | 47085 |
| ATG86475.1 | MF185728_p64 | hypothetical protein | phrog_5917 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 45800 | 46000 |
| ATG86482.1 | MF185728_p71 | endonuclease VII | phrog_2633 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 49120 | 49566 |
| ATG86527.1 | MF185728_p116 | hypothetical protein | phrog_6739 | unknown function | unknown function | -1 | 68531 | 68647 |
| ATG86460.1 | MF185728_p49 | hypothetical protein | phrog_6017 | unknown function | unknown function | 1 | 38227 | 38544 |
| ATG86432.1 | MF185728_p21 | hypothetical protein | phrog_9672 | minor tail protein | tail | 1 | 21038 | 21208 |
| ATG86491.1 | MF185728_p80 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 54386 | 54682 |
| ATG86446.1 | MF185728_p35 | nucleotidyltransferase | phrog_388 | nucleotidyltransferase | DNA, RNA and nucleotide metabolism | -1 | 29656 | 30402 |
| ATG86456.1 | MF185728_p45 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 35623 | 36048 |
| ATG86424.1 | MF185728_p13 | major tail protein | phrog_476 | major tail protein | tail | 1 | 9002 | 9901 |
| ATG86455.1 | MF185728_p44 | hypothetical protein | phrog_8707 | unknown function | unknown function | 1 | 35525 | 35635 |
| ATG86537.1 | MF185728_p126 | hypothetical protein | phrog_1909 | unknown function | unknown function | -1 | 72775 | 73626 |
| ATG86436.1 | MF185728_p25 | hypothetical protein | phrog_9833 | unknown function | unknown function | 1 | 24265 | 24414 |
| ATG86539.1 | MF185728_p128 | hypothetical protein | phrog_38731 | unknown function | unknown function | -1 | 75267 | 75383 |
| ATG86525.1 | MF185728_p114 | hypothetical protein | phrog_18991 | unknown function | unknown function | -1 | 67806 | 67994 |
| ATG86528.1 | MF185728_p117 | hypothetical protein | phrog_34733 | unknown function | unknown function | -1 | 68648 | 68809 |
| ATG86434.1 | MF185728_p23 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 21558 | 21944 |
| ATG86486.1 | MF185728_p75 | nicotinate ribosyltransferase | phrog_448 | nicotinamide phosphoribosyl transferase | other | 1 | 50901 | 52385 |
| ATG86472.1 | MF185728_p61 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 43817 | 44749 |
| ATG86542.1 | MF185728_p131 | hypothetical protein | phrog_15448 | unknown function | unknown function | -1 | 76267 | 76392 |
| ATG86505.1 | MF185728_p94 | hypothetical protein | phrog_2218 | unknown function | unknown function | 1 | 59962 | 60183 |
| ATG86441.1 | MF185728_p30 | hypothetical protein | phrog_5807 | unknown function | unknown function | 1 | 28028 | 28282 |
| ATG86503.1 | MF185728_p92 | hypothetical protein | phrog_7495 | unknown function | unknown function | 1 | 59463 | 59858 |
| ATG86450.1 | MF185728_p39 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 33236 | 34015 |
| ATG86458.1 | MF185728_p47 | esterase | phrog_1649 | metallo-phosphoesterase | other | 1 | 36890 | 37924 |
| ATG86511.1 | MF185728_p100 | hypothetical protein | phrog_397 | unknown function | unknown function | 1 | 62460 | 62642 |
| ATG86530.1 | MF185728_p119 | hypothetical protein | phrog_1909 | unknown function | unknown function | -1 | 69076 | 69927 |
| ATG86454.1 | MF185728_p43 | hypothetical protein | phrog_762 | unknown function | unknown function | 1 | 35182 | 35544 |
| ATG86481.1 | MF185728_p70 | hypothetical protein | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 47901 | 49166 |
| ATG86447.1 | MF185728_p36 | DNA bridging protein | phrog_1223 | nucloid associated Lsr2-like | DNA, RNA and nucleotide metabolism | -1 | 30489 | 30950 |
| ATG86452.1 | MF185728_p41 | CRO protein | phrog_1702 | transcriptional repressor | transcription regulation | 1 | 34743 | 34973 |
| ATG86516.1 | MF185728_p105 | hypothetical protein | phrog_6800 | unknown function | unknown function | 1 | 63620 | 63799 |
| ATG86419.1 | MF185728_p8 | major capsid protein | phrog_283 | major head protein | head and packaging | 1 | 6070 | 7218 |
| ATG86524.1 | MF185728_p113 | hypothetical protein | phrog_18249 | unknown function | unknown function | -1 | 67375 | 67809 |
| ATG86540.1 | MF185728_p129 | hypothetical protein | singleton | unknown function | unknown function | -1 | 75442 | 75657 |
| ATG86451.1 | MF185728_p40 | immunity repressor | phrog_1746 | transcriptional repressor | transcription regulation | -1 | 34167 | 34556 |
| ATG86479.1 | MF185728_p68 | hypothetical protein | phrog_542 | unknown function | unknown function | 1 | 47045 | 47227 |
| ATG86487.1 | MF185728_p76 | polynucleotide kinase | phrog_505 | polynucleotide kinase | other | 1 | 52472 | 53398 |
| ATG86541.1 | MF185728_p130 | hypothetical protein | phrog_7398 | unknown function | unknown function | -1 | 75741 | 76184 |
| ATG86502.1 | MF185728_p91 | protease | phrog_94 | head maturation protease | head and packaging | 1 | 58780 | 59463 |
| ATG86442.1 | MF185728_p31 | hypothetical protein | phrog_726 | unknown function | unknown function | 1 | 28285 | 28707 |
| ATG86515.1 | MF185728_p104 | hypothetical protein | phrog_6027 | unknown function | unknown function | 1 | 63504 | 63623 |
| ATG86412.1 | MF185728_p1 | hypothetical protein | phrog_7082 | unknown function | unknown function | 1 | 91 | 468 |
| ATG86476.1 | MF185728_p65 | hypothetical protein | phrog_7527 | unknown function | unknown function | 1 | 45997 | 46281 |