| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF189170 |
Definition |
Arthrobacter phage Arcadia, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Mudcatvirus; unclassified Mudcatvirus. |
DB of origin |
NUCCORE |
Length |
58059 |
Host Name |
Arthrobacter sp. |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
97 |
%GC |
45.15 |
Number of singletons |
2 |
Number of paralogs |
4 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASR79984.1 | MF189170_p20 | hypothetical protein | phrog_11373 | tail protein | tail | 1 | 15383 | 17269 |
| ASR80051.1 | MF189170_p88 | hypothetical protein | phrog_13290 | unknown function | unknown function | 1 | 51962 | 52318 |
| ASR80015.1 | MF189170_p52 | hypothetical protein | phrog_8761 | unknown function | unknown function | 1 | 33235 | 33333 |
| ASR79997.1 | MF189170_p33 | hypothetical protein | phrog_13222 | unknown function | unknown function | 1 | 26773 | 26991 |
| ASR80033.1 | MF189170_p70 | hypothetical protein | phrog_419 | unknown function | unknown function | 1 | 43764 | 44090 |
| ASR79990.1 | MF189170_p26 | hypothetical protein | phrog_7656 | unknown function | unknown function | 1 | 24545 | 24826 |
| ASR80008.1 | MF189170_p45 | hypothetical protein | phrog_5135 | unknown function | unknown function | 1 | 30887 | 31159 |
| ASR80037.1 | MF189170_p74 | hypothetical protein | phrog_14070 | unknown function | unknown function | 1 | 45108 | 45305 |
| ASR79971.1 | MF189170_p7 | hypothetical protein | phrog_7021 | unknown function | unknown function | 1 | 3209 | 4216 |
| ASR79973.1 | MF189170_p9 | hypothetical protein | phrog_6291 | unknown function | unknown function | 1 | 6000 | 6509 |
| ASR80026.1 | MF189170_p63 | hypothetical protein | phrog_14033 | unknown function | unknown function | 1 | 41497 | 41631 |
| ASR80045.1 | MF189170_p82 | hypothetical protein | phrog_21833 | unknown function | unknown function | 1 | 49174 | 49647 |
| ASR80061.1 | MF189170_p40 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28931 | 29140 |
| ASR79969.1 | MF189170_p5 | endolysin | phrog_13392 | endolysin | lysis | 1 | 1896 | 2822 |
| ASR80009.1 | MF189170_p46 | hypothetical protein | phrog_12443 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 31207 | 31410 |
| ASR80000.1 | MF189170_p36 | hypothetical protein | phrog_13500 | unknown function | unknown function | 1 | 27617 | 27823 |
| ASR79989.1 | MF189170_p25 | hypothetical protein | phrog_8599 | unknown function | unknown function | 1 | 24095 | 24541 |
| ASR80034.1 | MF189170_p71 | hypothetical protein | phrog_13815 | unknown function | unknown function | 1 | 44187 | 44465 |
| ASR79994.1 | MF189170_p30 | hypothetical protein | phrog_13694 | unknown function | unknown function | 1 | 26074 | 26274 |
| ASR79982.1 | MF189170_p18 | minor tail protein | phrog_11419 | tail fiber protein | tail | 1 | 13315 | 14601 |
| ASR79985.1 | MF189170_p21 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 17293 | 17673 |
| ASR80001.1 | MF189170_p37 | hypothetical protein | phrog_6618 | unknown function | unknown function | 1 | 27918 | 28139 |
| ASR80027.1 | MF189170_p64 | hypothetical protein | phrog_18271 | unknown function | unknown function | 1 | 41646 | 41912 |
| ASR80041.1 | MF189170_p78 | hypothetical protein | phrog_13691 | unknown function | unknown function | 1 | 46486 | 46773 |
| ASR80036.1 | MF189170_p73 | hypothetical protein | phrog_419 | unknown function | unknown function | 1 | 44784 | 45098 |
| ASR79992.1 | MF189170_p28 | hypothetical protein | phrog_5818 | unknown function | unknown function | 1 | 25294 | 25584 |
| ASR79978.1 | MF189170_p14 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 10729 | 11031 |
| ASR80048.1 | MF189170_p85 | hypothetical protein | phrog_6086 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 50574 | 50978 |
| ASR80007.1 | MF189170_p44 | hypothetical protein | phrog_6802 | unknown function | unknown function | 1 | 30490 | 30855 |
| ASR80042.1 | MF189170_p79 | ATP-dependent helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 46777 | 48087 |
| ASR80018.1 | MF189170_p55 | hypothetical protein | phrog_6038 | unknown function | unknown function | 1 | 34265 | 34387 |
| ASR80043.1 | MF189170_p80 | hypothetical protein | phrog_14638 | unknown function | unknown function | 1 | 48116 | 48934 |
| ASR80014.1 | MF189170_p51 | hypothetical protein | phrog_12455 | unknown function | unknown function | 1 | 33107 | 33238 |
| ASR80059.1 | MF189170_p97 | hypothetical protein | phrog_4303 | unknown function | unknown function | 1 | 57747 | 58004 |
| ASR80050.1 | MF189170_p87 | hypothetical protein | phrog_22318 | unknown function | unknown function | 1 | 51781 | 51969 |
| ASR79996.1 | MF189170_p32 | hypothetical protein | phrog_13273 | unknown function | unknown function | 1 | 26583 | 26783 |
| ASR79981.1 | MF189170_p17 | major tail protein | phrog_2645 | major tail protein | tail | 1 | 12512 | 13315 |
| ASR80030.1 | MF189170_p67 | hypothetical protein | phrog_14552 | unknown function | unknown function | 1 | 42565 | 42939 |
| ASR80054.1 | MF189170_p91 | hypothetical protein | phrog_13716 | unknown function | unknown function | 1 | 52797 | 53285 |
| ASR80013.1 | MF189170_p50 | hypothetical protein | phrog_13917 | unknown function | unknown function | 1 | 32889 | 33080 |
| ASR79983.1 | MF189170_p19 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14598 | 15293 |
| ASR80012.1 | MF189170_p49 | hypothetical protein | phrog_7539 | unknown function | unknown function | 1 | 32580 | 32888 |
| ASR80006.1 | MF189170_p43 | hypothetical protein | phrog_2152 | unknown function | unknown function | 1 | 29717 | 30475 |
| ASR80046.1 | MF189170_p83 | hypothetical protein | phrog_13630 | unknown function | unknown function | 1 | 49647 | 49868 |
| ASR79970.1 | MF189170_p6 | hypothetical protein | phrog_4247 | virion structural protein | head and packaging | 1 | 2848 | 3216 |
| ASR80025.1 | MF189170_p62 | hypothetical protein | phrog_21647 | unknown function | unknown function | 1 | 41331 | 41522 |
| ASR80019.1 | MF189170_p56 | hypothetical protein | phrog_13604 | unknown function | unknown function | 1 | 34392 | 34688 |
| ASR79967.1 | MF189170_p3 | hypothetical protein | phrog_4259 | unknown function | unknown function | 1 | 1126 | 1473 |
| ASR79975.1 | MF189170_p11 | hypothetical protein | phrog_11413 | unknown function | unknown function | 1 | 7831 | 8442 |
| ASR79986.1 | MF189170_p22 | tape measure protein | phrog_4372 | tail length tape measure protein | tail | 1 | 17670 | 22148 |
| ASR79977.1 | MF189170_p13 | hypothetical protein | phrog_4270 | unknown function | unknown function | 1 | 10419 | 10754 |
| ASR80060.1 | MF189170_p92 | hypothetical protein | phrog_17329 | unknown function | unknown function | 1 | 53282 | 53533 |
| ASR80005.1 | MF189170_p42 | hypothetical protein | phrog_13924 | unknown function | unknown function | 1 | 29604 | 29720 |
| ASR80020.1 | MF189170_p57 | hypothetical protein | phrog_2152 | unknown function | unknown function | 1 | 34688 | 35599 |
| ASR80004.1 | MF189170_p41 | hypothetical protein | phrog_6363 | unknown function | unknown function | 1 | 29295 | 29603 |
| ASR79965.1 | MF189170_p1 | hypothetical protein | phrog_6978 | unknown function | unknown function | 1 | 70 | 285 |
| ASR80039.1 | MF189170_p76 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 45700 | 46212 |
| ASR79987.1 | MF189170_p23 | minor tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 22148 | 22999 |
| ASR80028.1 | MF189170_p65 | hypothetical protein | phrog_478 | site-specific recombination directionality factor RDF | integration and excision | 1 | 41909 | 42322 |
| ASR80053.1 | MF189170_p90 | hypothetical protein | phrog_2421 | unknown function | unknown function | 1 | 52556 | 52813 |
| ASR79991.1 | MF189170_p27 | hypothetical protein | phrog_13239 | unknown function | unknown function | 1 | 24836 | 25252 |
| ASR79998.1 | MF189170_p34 | hypothetical protein | phrog_14067 | unknown function | unknown function | 1 | 27031 | 27219 |
| ASR80003.1 | MF189170_p39 | acetyltransferase domain protein | phrog_14082 | unknown function | unknown function | 1 | 28602 | 28934 |
| ASR80017.1 | MF189170_p54 | hypothetical protein | phrog_17504 | unknown function | unknown function | 1 | 34028 | 34246 |
| ASR80002.1 | MF189170_p38 | hypothetical protein | phrog_16161 | unknown function | unknown function | 1 | 28208 | 28612 |
| ASR79972.1 | MF189170_p8 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 4237 | 5991 |
| ASR79995.1 | MF189170_p31 | hypothetical protein | phrog_22611 | unknown function | unknown function | 1 | 26347 | 26583 |
| ASR79979.1 | MF189170_p15 | major tail protein | phrog_2645 | major tail protein | tail | 1 | 11044 | 11910 |
| ASR80038.1 | MF189170_p75 | hypothetical protein | phrog_14438 | unknown function | unknown function | 1 | 45333 | 45599 |
| ASR80032.1 | MF189170_p69 | hypothetical protein | phrog_8423 | unknown function | unknown function | 1 | 43472 | 43750 |
| ASR80016.1 | MF189170_p53 | hypothetical protein | phrog_4079 | unknown function | unknown function | 1 | 33343 | 34035 |
| ASR80031.1 | MF189170_p68 | hypothetical protein | phrog_4787 | single strand annealing protein | DNA, RNA and nucleotide metabolism | 1 | 42977 | 43471 |
| ASR80022.1 | MF189170_p59 | hypothetical protein | phrog_4695 | unknown function | unknown function | 1 | 35986 | 36783 |
| ASR79980.1 | MF189170_p16 | hypothetical protein | phrog_4338 | unknown function | unknown function | 1 | 11936 | 12493 |
| ASR80052.1 | MF189170_p89 | hypothetical protein | phrog_14407 | unknown function | unknown function | 1 | 52318 | 52563 |
| ASR80040.1 | MF189170_p77 | hypothetical protein | phrog_20216 | unknown function | unknown function | 1 | 46232 | 46486 |
| ASR80023.1 | MF189170_p60 | hypothetical protein | phrog_4678 | unknown function | unknown function | 1 | 36770 | 37333 |
| ASR80056.1 | MF189170_p94 | RuvC-like resolvase | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 54217 | 54519 |
| ASR80044.1 | MF189170_p81 | hypothetical protein | phrog_13664 | unknown function | unknown function | 1 | 48931 | 49137 |
| ASR80058.1 | MF189170_p96 | HTH DNA binding domain protein | phrog_4291 | RNA-dependent RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 55060 | 57735 |
| ASR80021.1 | MF189170_p58 | hypothetical protein | phrog_13128 | unknown function | unknown function | 1 | 35630 | 35989 |
| ASR80049.1 | MF189170_p86 | thymidylate synthase | phrog_160 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 50975 | 51781 |
| ASR80011.1 | MF189170_p48 | hypothetical protein | phrog_4282 | unknown function | unknown function | 1 | 31859 | 32455 |
| ASR79974.1 | MF189170_p10 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 6524 | 7834 |
| ASR79976.1 | MF189170_p12 | capsid & capsid maturation protease | phrog_3270 | head maturation protease | head and packaging | 1 | 8426 | 10399 |
| ASR80010.1 | MF189170_p47 | hypothetical protein | phrog_918 | unknown function | unknown function | 1 | 31488 | 31844 |
| ASR80035.1 | MF189170_p72 | hypothetical protein | phrog_419 | unknown function | unknown function | 1 | 44474 | 44782 |
| ASR80047.1 | MF189170_p84 | HNH endonuclease domain protein | phrog_14097 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 49903 | 50577 |
| ASR80055.1 | MF189170_p93 | hypothetical protein | phrog_11305 | unknown function | unknown function | 1 | 53530 | 53778 |
| ASR80057.1 | MF189170_p95 | exonuclease | phrog_3953 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 54485 | 55063 |
| ASR79968.1 | MF189170_p4 | HNH endonuclease | phrog_4321 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 1466 | 1873 |
| ASR79993.1 | MF189170_p29 | hypothetical protein | phrog_18267 | unknown function | unknown function | 1 | 25746 | 25979 |
| ASR80024.1 | MF189170_p61 | DNA polymerase/primase | phrog_4210 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 37357 | 41304 |
| ASR79988.1 | MF189170_p24 | minor tail protein | phrog_538 | minor tail protein | tail | 1 | 23000 | 24061 |
| ASR79999.1 | MF189170_p35 | hypothetical protein | phrog_13615 | unknown function | unknown function | 1 | 27286 | 27609 |
| ASR80029.1 | MF189170_p66 | hypothetical protein | phrog_13867 | unknown function | unknown function | 1 | 42435 | 42563 |
| ASR79966.1 | MF189170_p2 | hypothetical protein | phrog_10659 | unknown function | unknown function | 1 | 525 | 869 |