Genomic map of Arthrobacter phage Arcadia (MF189170)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF189170
Definition
Arthrobacter phage Arcadia, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Mudcatvirus; unclassified Mudcatvirus.
DB of origin
NUCCORE
Length
58059
Host Name
Arthrobacter sp.
Host domain
Bacteria
Is prophage?
undef
Number of proteins
97
%GC
45.15
Number of singletons
2
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASR79984.1 MF189170_p20 hypothetical protein phrog_11373 tail protein tail 1 15383 17269
ASR80051.1 MF189170_p88 hypothetical protein phrog_13290 unknown function unknown function 1 51962 52318
ASR80015.1 MF189170_p52 hypothetical protein phrog_8761 unknown function unknown function 1 33235 33333
ASR79997.1 MF189170_p33 hypothetical protein phrog_13222 unknown function unknown function 1 26773 26991
ASR80033.1 MF189170_p70 hypothetical protein phrog_419 unknown function unknown function 1 43764 44090
ASR79990.1 MF189170_p26 hypothetical protein phrog_7656 unknown function unknown function 1 24545 24826
ASR80008.1 MF189170_p45 hypothetical protein phrog_5135 unknown function unknown function 1 30887 31159
ASR80037.1 MF189170_p74 hypothetical protein phrog_14070 unknown function unknown function 1 45108 45305
ASR79971.1 MF189170_p7 hypothetical protein phrog_7021 unknown function unknown function 1 3209 4216
ASR79973.1 MF189170_p9 hypothetical protein phrog_6291 unknown function unknown function 1 6000 6509
ASR80026.1 MF189170_p63 hypothetical protein phrog_14033 unknown function unknown function 1 41497 41631
ASR80045.1 MF189170_p82 hypothetical protein phrog_21833 unknown function unknown function 1 49174 49647
ASR80061.1 MF189170_p40 hypothetical protein singleton unknown function unknown function 1 28931 29140
ASR79969.1 MF189170_p5 endolysin phrog_13392 endolysin lysis 1 1896 2822
ASR80009.1 MF189170_p46 hypothetical protein phrog_12443 membrane protein moron, auxiliary metabolic gene and host takeover 1 31207 31410
ASR80000.1 MF189170_p36 hypothetical protein phrog_13500 unknown function unknown function 1 27617 27823
ASR79989.1 MF189170_p25 hypothetical protein phrog_8599 unknown function unknown function 1 24095 24541
ASR80034.1 MF189170_p71 hypothetical protein phrog_13815 unknown function unknown function 1 44187 44465
ASR79994.1 MF189170_p30 hypothetical protein phrog_13694 unknown function unknown function 1 26074 26274
ASR79982.1 MF189170_p18 minor tail protein phrog_11419 tail fiber protein tail 1 13315 14601
ASR79985.1 MF189170_p21 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 17293 17673
ASR80001.1 MF189170_p37 hypothetical protein phrog_6618 unknown function unknown function 1 27918 28139
ASR80027.1 MF189170_p64 hypothetical protein phrog_18271 unknown function unknown function 1 41646 41912
ASR80041.1 MF189170_p78 hypothetical protein phrog_13691 unknown function unknown function 1 46486 46773
ASR80036.1 MF189170_p73 hypothetical protein phrog_419 unknown function unknown function 1 44784 45098
ASR79992.1 MF189170_p28 hypothetical protein phrog_5818 unknown function unknown function 1 25294 25584
ASR79978.1 MF189170_p14 hypothetical protein phrog_78 tail terminator connector 1 10729 11031
ASR80048.1 MF189170_p85 hypothetical protein phrog_6086 HNH endonuclease DNA, RNA and nucleotide metabolism 1 50574 50978
ASR80007.1 MF189170_p44 hypothetical protein phrog_6802 unknown function unknown function 1 30490 30855
ASR80042.1 MF189170_p79 ATP-dependent helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 46777 48087
ASR80018.1 MF189170_p55 hypothetical protein phrog_6038 unknown function unknown function 1 34265 34387
ASR80043.1 MF189170_p80 hypothetical protein phrog_14638 unknown function unknown function 1 48116 48934
ASR80014.1 MF189170_p51 hypothetical protein phrog_12455 unknown function unknown function 1 33107 33238
ASR80059.1 MF189170_p97 hypothetical protein phrog_4303 unknown function unknown function 1 57747 58004
ASR80050.1 MF189170_p87 hypothetical protein phrog_22318 unknown function unknown function 1 51781 51969
ASR79996.1 MF189170_p32 hypothetical protein phrog_13273 unknown function unknown function 1 26583 26783
ASR79981.1 MF189170_p17 major tail protein phrog_2645 major tail protein tail 1 12512 13315
ASR80030.1 MF189170_p67 hypothetical protein phrog_14552 unknown function unknown function 1 42565 42939
ASR80054.1 MF189170_p91 hypothetical protein phrog_13716 unknown function unknown function 1 52797 53285
ASR80013.1 MF189170_p50 hypothetical protein phrog_13917 unknown function unknown function 1 32889 33080
ASR79983.1 MF189170_p19 hypothetical protein singleton unknown function unknown function 1 14598 15293
ASR80012.1 MF189170_p49 hypothetical protein phrog_7539 unknown function unknown function 1 32580 32888
ASR80006.1 MF189170_p43 hypothetical protein phrog_2152 unknown function unknown function 1 29717 30475
ASR80046.1 MF189170_p83 hypothetical protein phrog_13630 unknown function unknown function 1 49647 49868
ASR79970.1 MF189170_p6 hypothetical protein phrog_4247 virion structural protein head and packaging 1 2848 3216
ASR80025.1 MF189170_p62 hypothetical protein phrog_21647 unknown function unknown function 1 41331 41522
ASR80019.1 MF189170_p56 hypothetical protein phrog_13604 unknown function unknown function 1 34392 34688
ASR79967.1 MF189170_p3 hypothetical protein phrog_4259 unknown function unknown function 1 1126 1473
ASR79975.1 MF189170_p11 hypothetical protein phrog_11413 unknown function unknown function 1 7831 8442
ASR79986.1 MF189170_p22 tape measure protein phrog_4372 tail length tape measure protein tail 1 17670 22148
ASR79977.1 MF189170_p13 hypothetical protein phrog_4270 unknown function unknown function 1 10419 10754
ASR80060.1 MF189170_p92 hypothetical protein phrog_17329 unknown function unknown function 1 53282 53533
ASR80005.1 MF189170_p42 hypothetical protein phrog_13924 unknown function unknown function 1 29604 29720
ASR80020.1 MF189170_p57 hypothetical protein phrog_2152 unknown function unknown function 1 34688 35599
ASR80004.1 MF189170_p41 hypothetical protein phrog_6363 unknown function unknown function 1 29295 29603
ASR79965.1 MF189170_p1 hypothetical protein phrog_6978 unknown function unknown function 1 70 285
ASR80039.1 MF189170_p76 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 45700 46212
ASR79987.1 MF189170_p23 minor tail protein phrog_33 distal tail protein Dit tail 1 22148 22999
ASR80028.1 MF189170_p65 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision 1 41909 42322
ASR80053.1 MF189170_p90 hypothetical protein phrog_2421 unknown function unknown function 1 52556 52813
ASR79991.1 MF189170_p27 hypothetical protein phrog_13239 unknown function unknown function 1 24836 25252
ASR79998.1 MF189170_p34 hypothetical protein phrog_14067 unknown function unknown function 1 27031 27219
ASR80003.1 MF189170_p39 acetyltransferase domain protein phrog_14082 unknown function unknown function 1 28602 28934
ASR80017.1 MF189170_p54 hypothetical protein phrog_17504 unknown function unknown function 1 34028 34246
ASR80002.1 MF189170_p38 hypothetical protein phrog_16161 unknown function unknown function 1 28208 28612
ASR79972.1 MF189170_p8 terminase large subunit phrog_9 terminase large subunit head and packaging 1 4237 5991
ASR79995.1 MF189170_p31 hypothetical protein phrog_22611 unknown function unknown function 1 26347 26583
ASR79979.1 MF189170_p15 major tail protein phrog_2645 major tail protein tail 1 11044 11910
ASR80038.1 MF189170_p75 hypothetical protein phrog_14438 unknown function unknown function 1 45333 45599
ASR80032.1 MF189170_p69 hypothetical protein phrog_8423 unknown function unknown function 1 43472 43750
ASR80016.1 MF189170_p53 hypothetical protein phrog_4079 unknown function unknown function 1 33343 34035
ASR80031.1 MF189170_p68 hypothetical protein phrog_4787 single strand annealing protein DNA, RNA and nucleotide metabolism 1 42977 43471
ASR80022.1 MF189170_p59 hypothetical protein phrog_4695 unknown function unknown function 1 35986 36783
ASR79980.1 MF189170_p16 hypothetical protein phrog_4338 unknown function unknown function 1 11936 12493
ASR80052.1 MF189170_p89 hypothetical protein phrog_14407 unknown function unknown function 1 52318 52563
ASR80040.1 MF189170_p77 hypothetical protein phrog_20216 unknown function unknown function 1 46232 46486
ASR80023.1 MF189170_p60 hypothetical protein phrog_4678 unknown function unknown function 1 36770 37333
ASR80056.1 MF189170_p94 RuvC-like resolvase phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 54217 54519
ASR80044.1 MF189170_p81 hypothetical protein phrog_13664 unknown function unknown function 1 48931 49137
ASR80058.1 MF189170_p96 HTH DNA binding domain protein phrog_4291 RNA-dependent RNA polymerase DNA, RNA and nucleotide metabolism 1 55060 57735
ASR80021.1 MF189170_p58 hypothetical protein phrog_13128 unknown function unknown function 1 35630 35989
ASR80049.1 MF189170_p86 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism 1 50975 51781
ASR80011.1 MF189170_p48 hypothetical protein phrog_4282 unknown function unknown function 1 31859 32455
ASR79974.1 MF189170_p10 portal protein phrog_12 portal protein head and packaging 1 6524 7834
ASR79976.1 MF189170_p12 capsid & capsid maturation protease phrog_3270 head maturation protease head and packaging 1 8426 10399
ASR80010.1 MF189170_p47 hypothetical protein phrog_918 unknown function unknown function 1 31488 31844
ASR80035.1 MF189170_p72 hypothetical protein phrog_419 unknown function unknown function 1 44474 44782
ASR80047.1 MF189170_p84 HNH endonuclease domain protein phrog_14097 HNH endonuclease DNA, RNA and nucleotide metabolism 1 49903 50577
ASR80055.1 MF189170_p93 hypothetical protein phrog_11305 unknown function unknown function 1 53530 53778
ASR80057.1 MF189170_p95 exonuclease phrog_3953 exonuclease DNA, RNA and nucleotide metabolism 1 54485 55063
ASR79968.1 MF189170_p4 HNH endonuclease phrog_4321 HNH endonuclease DNA, RNA and nucleotide metabolism 1 1466 1873
ASR79993.1 MF189170_p29 hypothetical protein phrog_18267 unknown function unknown function 1 25746 25979
ASR80024.1 MF189170_p61 DNA polymerase/primase phrog_4210 DNA polymerase DNA, RNA and nucleotide metabolism 1 37357 41304
ASR79988.1 MF189170_p24 minor tail protein phrog_538 minor tail protein tail 1 23000 24061
ASR79999.1 MF189170_p35 hypothetical protein phrog_13615 unknown function unknown function 1 27286 27609
ASR80029.1 MF189170_p66 hypothetical protein phrog_13867 unknown function unknown function 1 42435 42563
ASR79966.1 MF189170_p2 hypothetical protein phrog_10659 unknown function unknown function 1 525 869