Genomic map of Arthrobacter phage Shade (MF189178)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF189178
Definition
Arthrobacter phage Shade, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Marthavirus; Arthrobacter virus Shade.
DB of origin
NUCCORE
Length
50930
Host Name
Arthrobacter sp.
Host domain
Bacteria
Is prophage?
undef
Number of proteins
77
%GC
61.08
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASR80777.1 MF189178_p72 AlpA-like DNA binding protein phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism -1 46415 46747
ASR80722.1 MF189178_p17 hypothetical protein phrog_5088 tail assembly chaperone tail 1 12945 13526
ASR80714.1 MF189178_p9 major capsid protein phrog_1650 major head protein head and packaging 1 7556 8443
ASR80755.1 MF189178_p50 hypothetical protein phrog_13447 unknown function unknown function 1 37251 37472
ASR80724.1 MF189178_p19 tape measure protein phrog_971 endolysin lysis 1 13748 16378
ASR80728.1 MF189178_p23 minor tail protein phrog_5207 unknown function unknown function 1 18805 20874
ASR80757.1 MF189178_p52 hypothetical protein phrog_16671 unknown function unknown function 1 37848 38201
ASR80775.1 MF189178_p70 hypothetical protein phrog_9461 unknown function unknown function 1 45389 45613
ASR80713.1 MF189178_p8 hypothetical protein phrog_673 head scaffolding protein head and packaging 1 7148 7534
ASR80781.1 MF189178_p76 hypothetical protein phrog_1221 unknown function unknown function -1 49365 50360
ASR80778.1 MF189178_p73 DNA polymerase III subunit beta phrog_947 DNA polymerase processivity factor DNA, RNA and nucleotide metabolism -1 46774 48030
ASR80754.1 MF189178_p49 hypothetical protein phrog_8872 unknown function unknown function 1 36968 37246
ASR80727.1 MF189178_p22 hypothetical protein phrog_5161 unknown function unknown function 1 18398 18808
ASR80723.1 MF189178_p18 hypothetical protein phrog_14573 unknown function unknown function 1 13601 13729
ASR80749.1 MF189178_p44 hypothetical protein singleton unknown function unknown function 1 34993 35391
ASR80720.1 MF189178_p15 tail sheath protein phrog_23 tail sheath tail 1 10879 12327
ASR80725.1 MF189178_p20 LysM phrog_380 endolysin lysis 1 16381 17046
ASR80776.1 MF189178_p71 hypothetical protein phrog_1384 Mom-like DNA modification protein other 1 45610 46230
ASR80708.1 MF189178_p3 portal protein phrog_113 portal protein head and packaging 1 1970 3445
ASR80736.1 MF189178_p31 baseplate J-like protein phrog_6 baseplate wedge subunit tail 1 25949 27079
ASR80739.1 MF189178_p34 exonuclease phrog_434 RecE-like recombination exonuclease DNA, RNA and nucleotide metabolism 1 28686 29714
ASR80715.1 MF189178_p10 hypothetical protein phrog_9354 unknown function unknown function 1 8450 8977
ASR80726.1 MF189178_p21 minor tail protein phrog_52 tail protein tail 1 17046 18395
ASR80767.1 MF189178_p62 hypothetical protein phrog_9045 unknown function unknown function 1 41462 41848
ASR80759.1 MF189178_p54 hypothetical protein phrog_5352 unknown function unknown function 1 38502 38795
ASR80761.1 MF189178_p56 hypothetical protein phrog_9308 unknown function unknown function 1 39324 40178
ASR80752.1 MF189178_p47 hypothetical protein phrog_9025 unknown function unknown function 1 36112 36564
ASR80765.1 MF189178_p60 hypothetical protein phrog_8873 unknown function unknown function 1 40961 41278
ASR80729.1 MF189178_p24 minor tail protein phrog_5231 unknown function unknown function 1 20928 22787
ASR80774.1 MF189178_p69 DNA binding protein phrog_620 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 44814 45389
ASR80782.1 MF189178_p77 hypothetical protein phrog_25749 unknown function unknown function -1 50453 50761
ASR80711.1 MF189178_p6 hypothetical protein phrog_14229 unknown function unknown function -1 5569 5805
ASR80709.1 MF189178_p4 capsid maturation protease phrog_595 head maturation protease head and packaging 1 3446 5155
ASR80730.1 MF189178_p25 hypothetical protein phrog_4565 unknown function unknown function 1 22787 23077
ASR80737.1 MF189178_p32 minor tail protein phrog_9229 tail protein tail 1 27079 28356
ASR80773.1 MF189178_p68 hypothetical protein phrog_5264 unknown function unknown function 1 44206 44817
ASR80710.1 MF189178_p5 hypothetical protein phrog_3585 immunity protein other 1 5155 5445
ASR80716.1 MF189178_p11 hypothetical protein phrog_5280 unknown function unknown function 1 8986 9498
ASR80706.1 MF189178_p1 HTH DNA binding domain protein phrog_645 Rnase E DNA, RNA and nucleotide metabolism 1 1 480
ASR80779.1 MF189178_p74 hypothetical protein phrog_9278 unknown function unknown function -1 48111 48761
ASR80760.1 MF189178_p55 hypothetical protein phrog_9121 unknown function unknown function 1 38851 39228
ASR80741.1 MF189178_p36 HTH DNA binding protein phrog_6156 endonuclease DNA, RNA and nucleotide metabolism 1 30571 30807
ASR80719.1 MF189178_p14 hypothetical protein phrog_9144 unknown function unknown function 1 10637 10876
ASR80717.1 MF189178_p12 head to tail connector phrog_26 tail completion or Neck1 protein connector 1 9502 9969
ASR80740.1 MF189178_p35 RecT-like recombinase phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 29715 30578
ASR80721.1 MF189178_p16 tail tube protein phrog_5102 tail tube protein tail 1 12341 12757
ASR80745.1 MF189178_p40 hypothetical protein phrog_9073 unknown function unknown function 1 32688 33530
ASR80735.1 MF189178_p30 baseplate wedge protein phrog_5026 baseplate protein tail 1 25624 25956
ASR80751.1 MF189178_p46 hypothetical protein phrog_8957 unknown function unknown function 1 35661 36122
ASR80733.1 MF189178_p28 endolysin phrog_7470 amidase lysis 1 23623 25212
ASR80731.1 MF189178_p26 hypothetical protein phrog_5303 unknown function unknown function 1 23074 23280
ASR80747.1 MF189178_p42 resolvase phrog_9203 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 34080 34571
ASR80746.1 MF189178_p41 hypothetical protein phrog_8936 unknown function unknown function 1 33527 34045
ASR80766.1 MF189178_p61 hypothetical protein phrog_12068 unknown function unknown function 1 41271 41465
ASR80750.1 MF189178_p45 hypothetical protein singleton unknown function unknown function 1 35408 35668
ASR80771.1 MF189178_p66 hypothetical protein phrog_9132 unknown function unknown function 1 43273 43893
ASR80763.1 MF189178_p58 hypothetical protein phrog_9184 unknown function unknown function 1 40441 40722
ASR80734.1 MF189178_p29 hypothetical protein phrog_4316 unknown function unknown function 1 25212 25580
ASR80742.1 MF189178_p37 ssDNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 30810 31367
ASR80712.1 MF189178_p7 scaffolding protein phrog_3894 head maturation protease head and packaging 1 5940 7106
ASR80732.1 MF189178_p27 holin phrog_5480 unknown function unknown function 1 23277 23633
ASR80772.1 MF189178_p67 hypothetical protein phrog_18133 unknown function unknown function 1 43875 44105
ASR80758.1 MF189178_p53 hypothetical protein phrog_5352 unknown function unknown function 1 38209 38505
ASR80748.1 MF189178_p43 hypothetical protein phrog_17184 unknown function unknown function 1 34620 34928
ASR80764.1 MF189178_p59 hypothetical protein phrog_9753 unknown function unknown function 1 40725 40919
ASR80770.1 MF189178_p65 hypothetical protein phrog_9283 unknown function unknown function 1 42890 43276
ASR80769.1 MF189178_p64 hypothetical protein phrog_9225 unknown function unknown function 1 41991 42893
ASR80753.1 MF189178_p48 hypothetical protein phrog_7314 unknown function unknown function 1 36561 36971
ASR80743.1 MF189178_p38 HTH DNA binding protein phrog_7061 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 31674 31895
ASR80744.1 MF189178_p39 HTH DNA binding domain protein phrog_8064 replication initiation protein DNA, RNA and nucleotide metabolism 1 31892 32440
ASR80756.1 MF189178_p51 hypothetical protein phrog_10565 unknown function unknown function 1 37570 37812
ASR80707.1 MF189178_p2 terminase large subunit phrog_2 terminase large subunit head and packaging 1 477 1934
ASR80768.1 MF189178_p63 DNA binding protein phrog_12474 DNA binding protein DNA, RNA and nucleotide metabolism 1 41845 41991
ASR80780.1 MF189178_p75 hypothetical protein phrog_18125 unknown function unknown function -1 48842 49147
ASR80738.1 MF189178_p33 hypothetical protein phrog_9182 unknown function unknown function 1 28555 28689
ASR80762.1 MF189178_p57 hypothetical protein phrog_9070 unknown function unknown function 1 40175 40444
ASR80718.1 MF189178_p13 hypothetical protein phrog_5178 unknown function unknown function 1 9970 10578