functional categories (each PHROG annotation is associated to a category) | Notes | ||
head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
tail | lysis | other | - Scroll to zoom |
unknown function | - Click on a protein to see its PHROG |
Locus |
MF190168 |
Definition |
Mycobacterium phage Spoonbill, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus. |
DB of origin |
NUCCORE |
Length |
55735 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
103 |
%GC |
61.3 |
Number of singletons |
2 |
Number of paralogs |
2 |
NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
---|---|---|---|---|---|---|---|---|
ASR75847.1 | MF190168_p103 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 55237 | 55563 |
ASR75786.1 | MF190168_p42 | integrase | phrog_1 | integrase | integration and excision | 1 | 31856 | 33145 |
ASR75837.1 | MF190168_p93 | hypothetical protein | phrog_13974 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 51231 | 51533 |
ASR75776.1 | MF190168_p32 | holin | phrog_443 | holin | lysis | 1 | 28796 | 29029 |
ASR75816.1 | MF190168_p72 | hypothetical protein | phrog_2080 | unknown function | unknown function | 1 | 45779 | 46048 |
ASR75821.1 | MF190168_p77 | hypothetical protein | singleton | unknown function | unknown function | 1 | 46889 | 47299 |
ASR75826.1 | MF190168_p82 | hypothetical protein | phrog_6727 | unknown function | unknown function | 1 | 48473 | 48661 |
ASR75747.1 | MF190168_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2240 | 3610 |
ASR75843.1 | MF190168_p99 | hypothetical protein | phrog_2057 | unknown function | unknown function | 1 | 52784 | 52945 |
ASR75760.1 | MF190168_p16 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 14813 | 16522 |
ASR75817.1 | MF190168_p73 | hypothetical protein | phrog_11384 | unknown function | unknown function | 1 | 46041 | 46328 |
ASR75793.1 | MF190168_p49 | hypothetical protein | phrog_2021 | unknown function | unknown function | 1 | 35586 | 35969 |
ASR75828.1 | MF190168_p84 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 48846 | 49025 |
ASR75789.1 | MF190168_p45 | hypothetical protein | phrog_2838 | transcriptional repressor | transcription regulation | -1 | 33936 | 34607 |
ASR75822.1 | MF190168_p78 | MPME 1 protein | phrog_1900 | mobile element MPME | moron, auxiliary metabolic gene and host takeover | 1 | 47408 | 47740 |
ASR75810.1 | MF190168_p66 | DNA methylase | phrog_3008 | DNA methyltransferase | other | 1 | 43351 | 43602 |
ASR75780.1 | MF190168_p36 | hypothetical protein | phrog_1791 | unknown function | unknown function | 1 | 30482 | 30772 |
ASR75794.1 | MF190168_p50 | hypothetical protein | phrog_1816 | unknown function | unknown function | 1 | 35966 | 36154 |
ASR75825.1 | MF190168_p81 | hypothetical protein | phrog_2939 | unknown function | unknown function | 1 | 48265 | 48480 |
ASR75836.1 | MF190168_p92 | hypothetical protein | phrog_1869 | unknown function | unknown function | 1 | 51088 | 51234 |
ASR75808.1 | MF190168_p64 | DNA methylase | singleton | unknown function | unknown function | 1 | 42447 | 43211 |
ASR75792.1 | MF190168_p48 | hypothetical protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 35345 | 35542 |
ASR75790.1 | MF190168_p46 | helix-turn-helix DNA binding domain protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 34675 | 34908 |
ASR75751.1 | MF190168_p7 | head-to-tail connector protein | phrog_2377 | head-tail adaptor Ad1 | connector | 1 | 5879 | 6448 |
ASR75768.1 | MF190168_p24 | minor tail protein | phrog_754 | minor tail protein | tail | 1 | 24454 | 25278 |
ASR75806.1 | MF190168_p62 | hypothetical protein | phrog_4657 | unknown function | unknown function | 1 | 40973 | 41581 |
ASR75824.1 | MF190168_p80 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 47897 | 48268 |
ASR75791.1 | MF190168_p47 | hypothetical protein | phrog_2025 | unknown function | unknown function | 1 | 34968 | 35258 |
ASR75782.1 | MF190168_p38 | hypothetical protein | phrog_3693 | unknown function | unknown function | -1 | 30895 | 31047 |
ASR75787.1 | MF190168_p43 | hypothetical protein | phrog_1948 | unknown function | unknown function | -1 | 33226 | 33672 |
ASR75812.1 | MF190168_p68 | hypothetical protein | phrog_2704 | unknown function | unknown function | 1 | 43822 | 43971 |
ASR75785.1 | MF190168_p41 | hypothetical protein | phrog_22547 | unknown function | unknown function | 1 | 31516 | 31674 |
ASR75746.1 | MF190168_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 572 | 2209 |
ASR75765.1 | MF190168_p21 | minor tail protein | phrog_240 | head protein | head and packaging | 1 | 23068 | 23409 |
ASR75815.1 | MF190168_p71 | hypothetical protein | phrog_3171 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 44820 | 45779 |
ASR75800.1 | MF190168_p56 | hypothetical protein | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 38516 | 38794 |
ASR75762.1 | MF190168_p18 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 17404 | 19956 |
ASR75838.1 | MF190168_p94 | hypothetical protein | phrog_14508 | unknown function | unknown function | 1 | 51530 | 51652 |
ASR75761.1 | MF190168_p17 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 16559 | 17407 |
ASR75813.1 | MF190168_p69 | hypothetical protein | phrog_2070 | unknown function | unknown function | 1 | 43968 | 44120 |
ASR75745.1 | MF190168_p1 | terminase small subunit | phrog_226 | minor tail protein | tail | 1 | 109 | 564 |
ASR75756.1 | MF190168_p13 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 8538 | 9089 |
ASR75748.1 | MF190168_p4 | capsid maturation protease | phrog_1522 | head maturation protease | head and packaging | 1 | 3597 | 4352 |
ASR75831.1 | MF190168_p87 | hypothetical protein | phrog_4126 | unknown function | unknown function | 1 | 49289 | 49408 |
ASR75840.1 | MF190168_p96 | hypothetical protein | phrog_1694 | unknown function | unknown function | 1 | 51942 | 52142 |
ASR75784.1 | MF190168_p40 | excise | phrog_66 | excisionase and transcriptional regulator | integration and excision | -1 | 31230 | 31424 |
ASR75845.1 | MF190168_p101 | hypothetical protein | phrog_1693 | unknown function | unknown function | 1 | 54411 | 54617 |
ASR75754.1 | MF190168_p10 | head-to-tail connector protein | phrog_813 | head-tail adaptor | connector | 1 | 7097 | 7501 |
ASR75788.1 | MF190168_p44 | hypothetical protein | phrog_7613 | unknown function | unknown function | -1 | 33787 | 33933 |
ASR75796.1 | MF190168_p52 | hypothetical protein | phrog_1849 | unknown function | unknown function | 1 | 36918 | 37199 |
ASR75781.1 | MF190168_p37 | hypothetical protein | phrog_1839 | unknown function | unknown function | 1 | 30765 | 30857 |
ASR75771.1 | MF190168_p27 | hypothetical protein | phrog_932 | unknown function | unknown function | 1 | 25933 | 26082 |
ASR75802.1 | MF190168_p58 | hypothetical protein | phrog_2078 | unknown function | unknown function | 1 | 39156 | 39308 |
ASR75797.1 | MF190168_p53 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 37196 | 37543 |
ASR75811.1 | MF190168_p67 | hypothetical protein | phrog_6573 | unknown function | unknown function | 1 | 43661 | 43825 |
ASR75846.1 | MF190168_p102 | glycosyltransferase | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 54614 | 55237 |
ASR75820.1 | MF190168_p76 | hypothetical protein | phrog_2591 | unknown function | unknown function | 1 | 46647 | 46892 |
ASR75834.1 | MF190168_p90 | GIY-YIG endonuclease | phrog_3312 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 49750 | 50277 |
ASR75844.1 | MF190168_p100 | glycosyltransferase | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 52972 | 54408 |
ASR75833.1 | MF190168_p89 | hypothetical protein | phrog_6194 | unknown function | unknown function | 1 | 49638 | 49715 |
ASR75750.1 | MF190168_p6 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 5049 | 5870 |
ASR75832.1 | MF190168_p88 | hypothetical protein | phrog_2278 | unknown function | unknown function | 1 | 49405 | 49641 |
ASR75755.1 | MF190168_p11 | major tail protein | phrog_476 | major tail protein | tail | 1 | 7610 | 8419 |
ASR75775.1 | MF190168_p31 | lysin B | phrog_102 | endolysin | lysis | 1 | 27781 | 28782 |
ASR75830.1 | MF190168_p86 | hypothetical protein | phrog_12331 | unknown function | unknown function | 1 | 49164 | 49292 |
ASR75809.1 | MF190168_p65 | hypothetical protein | phrog_7789 | unknown function | unknown function | 1 | 43287 | 43376 |
ASR75769.1 | MF190168_p25 | helix-turn-helix DNA binding domain protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25284 | 25481 |
ASR75766.1 | MF190168_p22 | hypothetical protein | phrog_2005 | minor tail protein | tail | 1 | 23552 | 23806 |
ASR75814.1 | MF190168_p70 | GIY-YIG endonuclease | phrog_3312 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44266 | 44820 |
ASR75757.1 | MF190168_p12 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 8538 | 9474 |
ASR75753.1 | MF190168_p9 | head-to-tail connector protein | phrog_1929 | head-tail connector protein | connector | 1 | 6781 | 7107 |
ASR75798.1 | MF190168_p54 | WhiB family transcription factor | phrog_1333 | unknown function | unknown function | 1 | 37543 | 38037 |
ASR75778.1 | MF190168_p34 | hypothetical protein | phrog_2004 | unknown function | unknown function | 1 | 29425 | 29658 |
ASR75818.1 | MF190168_p74 | hypothetical protein | phrog_1943 | unknown function | unknown function | 1 | 46325 | 46519 |
ASR75783.1 | MF190168_p39 | hypothetical protein | phrog_2437 | unknown function | unknown function | -1 | 31029 | 31178 |
ASR75842.1 | MF190168_p98 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 52549 | 52791 |
ASR75799.1 | MF190168_p55 | hypothetical protein | phrog_2096 | unknown function | unknown function | 1 | 38034 | 38519 |
ASR75805.1 | MF190168_p61 | DNA recombinase | phrog_1366 | unknown function | unknown function | 1 | 39999 | 40976 |
ASR75763.1 | MF190168_p19 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 19953 | 21842 |
ASR75795.1 | MF190168_p51 | hypothetical protein | phrog_1797 | unknown function | unknown function | 1 | 36151 | 36924 |
ASR75835.1 | MF190168_p91 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 50274 | 50945 |
ASR75819.1 | MF190168_p75 | hypothetical protein | phrog_9840 | unknown function | unknown function | 1 | 46516 | 46647 |
ASR75749.1 | MF190168_p5 | scaffolding protein | phrog_2592 | head scaffolding protein | head and packaging | 1 | 4437 | 5030 |
ASR75779.1 | MF190168_p35 | DNA polymerase III subunit | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 29645 | 30466 |
ASR75772.1 | MF190168_p28 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 26079 | 26213 |
ASR75774.1 | MF190168_p30 | lysin A | phrog_700 | endolysin | lysis | 1 | 26510 | 27781 |
ASR75827.1 | MF190168_p83 | hypothetical protein | phrog_1901 | unknown function | unknown function | 1 | 48658 | 48849 |
ASR75764.1 | MF190168_p20 | minor tail protein | phrog_2106 | minor tail protein | tail | 1 | 21842 | 23044 |
ASR75839.1 | MF190168_p95 | hypothetical protein | phrog_419 | unknown function | unknown function | 1 | 51661 | 51942 |
ASR75770.1 | MF190168_p26 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 25630 | 25926 |
ASR75841.1 | MF190168_p97 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 52139 | 52552 |
ASR75804.1 | MF190168_p60 | hypothetical protein | phrog_5168 | unknown function | unknown function | 1 | 39538 | 40002 |
ASR75773.1 | MF190168_p29 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 26280 | 26513 |
ASR75807.1 | MF190168_p63 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 41578 | 41934 |
ASR75759.1 | MF190168_p15 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 13017 | 14726 |
ASR75752.1 | MF190168_p8 | head-to-tail connector protein | phrog_763 | head-tail adaptor | connector | 1 | 6445 | 6774 |
ASR75803.1 | MF190168_p59 | hypothetical protein | phrog_1834 | unknown function | unknown function | 1 | 39308 | 39541 |
ASR75829.1 | MF190168_p85 | hypothetical protein | phrog_1545 | unknown function | unknown function | 1 | 49030 | 49167 |
ASR75758.1 | MF190168_p14 | tape measure protein | phrog_1942 | tail length tape measure protein | tail | 1 | 9492 | 13016 |
ASR75767.1 | MF190168_p23 | minor tail protein | phrog_2012 | minor tail protein | tail | 1 | 23819 | 24457 |
ASR75801.1 | MF190168_p57 | helix-turn-helix DNA binding domain protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 38791 | 39156 |
ASR75777.1 | MF190168_p33 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 29026 | 29400 |
ASR75823.1 | MF190168_p79 | hypothetical protein | phrog_7842 | unknown function | unknown function | 1 | 47727 | 47900 |