Genomic map of Mycobacterium phage Spoonbill (MF190168)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF190168
Definition
Mycobacterium phage Spoonbill, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus.
DB of origin
NUCCORE
Length
55735
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
103
%GC
61.3
Number of singletons
2
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASR75847.1 MF190168_p103 HNH endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 55237 55563
ASR75786.1 MF190168_p42 integrase phrog_1 integrase integration and excision 1 31856 33145
ASR75837.1 MF190168_p93 hypothetical protein phrog_13974 membrane protein moron, auxiliary metabolic gene and host takeover 1 51231 51533
ASR75776.1 MF190168_p32 holin phrog_443 holin lysis 1 28796 29029
ASR75816.1 MF190168_p72 hypothetical protein phrog_2080 unknown function unknown function 1 45779 46048
ASR75821.1 MF190168_p77 hypothetical protein singleton unknown function unknown function 1 46889 47299
ASR75826.1 MF190168_p82 hypothetical protein phrog_6727 unknown function unknown function 1 48473 48661
ASR75747.1 MF190168_p3 portal protein phrog_104 portal protein head and packaging 1 2240 3610
ASR75843.1 MF190168_p99 hypothetical protein phrog_2057 unknown function unknown function 1 52784 52945
ASR75760.1 MF190168_p16 minor tail protein phrog_110 minor tail protein tail 1 14813 16522
ASR75817.1 MF190168_p73 hypothetical protein phrog_11384 unknown function unknown function 1 46041 46328
ASR75793.1 MF190168_p49 hypothetical protein phrog_2021 unknown function unknown function 1 35586 35969
ASR75828.1 MF190168_p84 hypothetical protein phrog_1091 unknown function unknown function 1 48846 49025
ASR75789.1 MF190168_p45 hypothetical protein phrog_2838 transcriptional repressor transcription regulation -1 33936 34607
ASR75822.1 MF190168_p78 MPME 1 protein phrog_1900 mobile element MPME moron, auxiliary metabolic gene and host takeover 1 47408 47740
ASR75810.1 MF190168_p66 DNA methylase phrog_3008 DNA methyltransferase other 1 43351 43602
ASR75780.1 MF190168_p36 hypothetical protein phrog_1791 unknown function unknown function 1 30482 30772
ASR75794.1 MF190168_p50 hypothetical protein phrog_1816 unknown function unknown function 1 35966 36154
ASR75825.1 MF190168_p81 hypothetical protein phrog_2939 unknown function unknown function 1 48265 48480
ASR75836.1 MF190168_p92 hypothetical protein phrog_1869 unknown function unknown function 1 51088 51234
ASR75808.1 MF190168_p64 DNA methylase singleton unknown function unknown function 1 42447 43211
ASR75792.1 MF190168_p48 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 35345 35542
ASR75790.1 MF190168_p46 helix-turn-helix DNA binding domain protein phrog_3 transcriptional repressor transcription regulation 1 34675 34908
ASR75751.1 MF190168_p7 head-to-tail connector protein phrog_2377 head-tail adaptor Ad1 connector 1 5879 6448
ASR75768.1 MF190168_p24 minor tail protein phrog_754 minor tail protein tail 1 24454 25278
ASR75806.1 MF190168_p62 hypothetical protein phrog_4657 unknown function unknown function 1 40973 41581
ASR75824.1 MF190168_p80 hypothetical protein phrog_647 unknown function unknown function 1 47897 48268
ASR75791.1 MF190168_p47 hypothetical protein phrog_2025 unknown function unknown function 1 34968 35258
ASR75782.1 MF190168_p38 hypothetical protein phrog_3693 unknown function unknown function -1 30895 31047
ASR75787.1 MF190168_p43 hypothetical protein phrog_1948 unknown function unknown function -1 33226 33672
ASR75812.1 MF190168_p68 hypothetical protein phrog_2704 unknown function unknown function 1 43822 43971
ASR75785.1 MF190168_p41 hypothetical protein phrog_22547 unknown function unknown function 1 31516 31674
ASR75746.1 MF190168_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 572 2209
ASR75765.1 MF190168_p21 minor tail protein phrog_240 head protein head and packaging 1 23068 23409
ASR75815.1 MF190168_p71 hypothetical protein phrog_3171 replication initiation protein DNA, RNA and nucleotide metabolism 1 44820 45779
ASR75800.1 MF190168_p56 hypothetical protein phrog_472 WhiB transcriptional factor transcription regulation 1 38516 38794
ASR75762.1 MF190168_p18 minor tail protein phrog_346 minor tail protein tail 1 17404 19956
ASR75838.1 MF190168_p94 hypothetical protein phrog_14508 unknown function unknown function 1 51530 51652
ASR75761.1 MF190168_p17 minor tail protein phrog_732 minor tail protein tail 1 16559 17407
ASR75813.1 MF190168_p69 hypothetical protein phrog_2070 unknown function unknown function 1 43968 44120
ASR75745.1 MF190168_p1 terminase small subunit phrog_226 minor tail protein tail 1 109 564
ASR75756.1 MF190168_p13 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 8538 9089
ASR75748.1 MF190168_p4 capsid maturation protease phrog_1522 head maturation protease head and packaging 1 3597 4352
ASR75831.1 MF190168_p87 hypothetical protein phrog_4126 unknown function unknown function 1 49289 49408
ASR75840.1 MF190168_p96 hypothetical protein phrog_1694 unknown function unknown function 1 51942 52142
ASR75784.1 MF190168_p40 excise phrog_66 excisionase and transcriptional regulator integration and excision -1 31230 31424
ASR75845.1 MF190168_p101 hypothetical protein phrog_1693 unknown function unknown function 1 54411 54617
ASR75754.1 MF190168_p10 head-to-tail connector protein phrog_813 head-tail adaptor connector 1 7097 7501
ASR75788.1 MF190168_p44 hypothetical protein phrog_7613 unknown function unknown function -1 33787 33933
ASR75796.1 MF190168_p52 hypothetical protein phrog_1849 unknown function unknown function 1 36918 37199
ASR75781.1 MF190168_p37 hypothetical protein phrog_1839 unknown function unknown function 1 30765 30857
ASR75771.1 MF190168_p27 hypothetical protein phrog_932 unknown function unknown function 1 25933 26082
ASR75802.1 MF190168_p58 hypothetical protein phrog_2078 unknown function unknown function 1 39156 39308
ASR75797.1 MF190168_p53 hypothetical protein phrog_658 unknown function unknown function 1 37196 37543
ASR75811.1 MF190168_p67 hypothetical protein phrog_6573 unknown function unknown function 1 43661 43825
ASR75846.1 MF190168_p102 glycosyltransferase phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 54614 55237
ASR75820.1 MF190168_p76 hypothetical protein phrog_2591 unknown function unknown function 1 46647 46892
ASR75834.1 MF190168_p90 GIY-YIG endonuclease phrog_3312 endonuclease DNA, RNA and nucleotide metabolism 1 49750 50277
ASR75844.1 MF190168_p100 glycosyltransferase phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 52972 54408
ASR75833.1 MF190168_p89 hypothetical protein phrog_6194 unknown function unknown function 1 49638 49715
ASR75750.1 MF190168_p6 major capsid protein phrog_267 major head protein head and packaging 1 5049 5870
ASR75832.1 MF190168_p88 hypothetical protein phrog_2278 unknown function unknown function 1 49405 49641
ASR75755.1 MF190168_p11 major tail protein phrog_476 major tail protein tail 1 7610 8419
ASR75775.1 MF190168_p31 lysin B phrog_102 endolysin lysis 1 27781 28782
ASR75830.1 MF190168_p86 hypothetical protein phrog_12331 unknown function unknown function 1 49164 49292
ASR75809.1 MF190168_p65 hypothetical protein phrog_7789 unknown function unknown function 1 43287 43376
ASR75769.1 MF190168_p25 helix-turn-helix DNA binding domain protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 25284 25481
ASR75766.1 MF190168_p22 hypothetical protein phrog_2005 minor tail protein tail 1 23552 23806
ASR75814.1 MF190168_p70 GIY-YIG endonuclease phrog_3312 endonuclease DNA, RNA and nucleotide metabolism 1 44266 44820
ASR75757.1 MF190168_p12 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 8538 9474
ASR75753.1 MF190168_p9 head-to-tail connector protein phrog_1929 head-tail connector protein connector 1 6781 7107
ASR75798.1 MF190168_p54 WhiB family transcription factor phrog_1333 unknown function unknown function 1 37543 38037
ASR75778.1 MF190168_p34 hypothetical protein phrog_2004 unknown function unknown function 1 29425 29658
ASR75818.1 MF190168_p74 hypothetical protein phrog_1943 unknown function unknown function 1 46325 46519
ASR75783.1 MF190168_p39 hypothetical protein phrog_2437 unknown function unknown function -1 31029 31178
ASR75842.1 MF190168_p98 hypothetical protein phrog_1385 unknown function unknown function 1 52549 52791
ASR75799.1 MF190168_p55 hypothetical protein phrog_2096 unknown function unknown function 1 38034 38519
ASR75805.1 MF190168_p61 DNA recombinase phrog_1366 unknown function unknown function 1 39999 40976
ASR75763.1 MF190168_p19 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 19953 21842
ASR75795.1 MF190168_p51 hypothetical protein phrog_1797 unknown function unknown function 1 36151 36924
ASR75835.1 MF190168_p91 hypothetical protein phrog_1467 unknown function unknown function 1 50274 50945
ASR75819.1 MF190168_p75 hypothetical protein phrog_9840 unknown function unknown function 1 46516 46647
ASR75749.1 MF190168_p5 scaffolding protein phrog_2592 head scaffolding protein head and packaging 1 4437 5030
ASR75779.1 MF190168_p35 DNA polymerase III subunit phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 29645 30466
ASR75772.1 MF190168_p28 hypothetical protein phrog_1172 unknown function unknown function 1 26079 26213
ASR75774.1 MF190168_p30 lysin A phrog_700 endolysin lysis 1 26510 27781
ASR75827.1 MF190168_p83 hypothetical protein phrog_1901 unknown function unknown function 1 48658 48849
ASR75764.1 MF190168_p20 minor tail protein phrog_2106 minor tail protein tail 1 21842 23044
ASR75839.1 MF190168_p95 hypothetical protein phrog_419 unknown function unknown function 1 51661 51942
ASR75770.1 MF190168_p26 hypothetical protein phrog_411 unknown function unknown function 1 25630 25926
ASR75841.1 MF190168_p97 hypothetical protein phrog_1186 unknown function unknown function 1 52139 52552
ASR75804.1 MF190168_p60 hypothetical protein phrog_5168 unknown function unknown function 1 39538 40002
ASR75773.1 MF190168_p29 hypothetical protein phrog_747 unknown function unknown function 1 26280 26513
ASR75807.1 MF190168_p63 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41578 41934
ASR75759.1 MF190168_p15 minor tail protein phrog_106 minor tail protein tail 1 13017 14726
ASR75752.1 MF190168_p8 head-to-tail connector protein phrog_763 head-tail adaptor connector 1 6445 6774
ASR75803.1 MF190168_p59 hypothetical protein phrog_1834 unknown function unknown function 1 39308 39541
ASR75829.1 MF190168_p85 hypothetical protein phrog_1545 unknown function unknown function 1 49030 49167
ASR75758.1 MF190168_p14 tape measure protein phrog_1942 tail length tape measure protein tail 1 9492 13016
ASR75767.1 MF190168_p23 minor tail protein phrog_2012 minor tail protein tail 1 23819 24457
ASR75801.1 MF190168_p57 helix-turn-helix DNA binding domain protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 38791 39156
ASR75777.1 MF190168_p33 hypothetical protein phrog_404 minor tail protein tail 1 29026 29400
ASR75823.1 MF190168_p79 hypothetical protein phrog_7842 unknown function unknown function 1 47727 47900