| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF281061 |
Definition |
Mycobacterium phage Ksquared, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus; unclassified Fishburnevirus. |
DB of origin |
NUCCORE |
Length |
48699 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
80 |
%GC |
67.09 |
Number of singletons |
0 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASR84934.1 | MF281061_p1 | terminase small subunit | phrog_1496 | terminase small subunit | head and packaging | 1 | 55 | 444 |
| ASR84987.1 | MF281061_p56 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 38503 | 39714 |
| ASR85008.1 | MF281061_p79 | hypothetical protein | phrog_7285 | unknown function | unknown function | 1 | 47855 | 48103 |
| ASR84949.1 | MF281061_p17 | tape measure protein | phrog_2337 | tail length tape measure protein | tail | 1 | 10889 | 14665 |
| ASR84964.1 | MF281061_p32 | excise | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 27490 | 27723 |
| ASR84957.1 | MF281061_p25 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 22901 | 23071 |
| ASR84994.1 | MF281061_p65 | hypothetical protein | phrog_2451 | unknown function | unknown function | 1 | 42287 | 42421 |
| ASR84971.1 | MF281061_p39 | hypothetical protein | phrog_4656 | unknown function | unknown function | 1 | 30317 | 30550 |
| ASR84961.1 | MF281061_p29 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 25501 | 25860 |
| ASR84942.1 | MF281061_p9 | head-to-tail connector complex protein | phrog_6553 | head closure Hc1 | connector | 1 | 6954 | 7304 |
| ASR84973.1 | MF281061_p41 | hypothetical protein | phrog_5803 | unknown function | unknown function | 1 | 30819 | 31091 |
| ASR84945.1 | MF281061_p12 | hypothetical protein | phrog_2325 | minor tail protein | tail | 1 | 7912 | 8325 |
| ASR84938.1 | MF281061_p5 | scaffolding protein | phrog_673 | head scaffolding protein | head and packaging | 1 | 4892 | 5257 |
| ASR84935.1 | MF281061_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 413 | 2089 |
| ASR84996.1 | MF281061_p67 | hypothetical protein | phrog_3599 | unknown function | unknown function | 1 | 43288 | 43818 |
| ASR84937.1 | MF281061_p4 | capsid maturation protease | phrog_2976 | head maturation protease | head and packaging | 1 | 3551 | 4888 |
| ASR85007.1 | MF281061_p78 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 47500 | 47868 |
| ASR84958.1 | MF281061_p26 | lysin A | phrog_6707 | endolysin | lysis | 1 | 23142 | 24071 |
| ASR84980.1 | MF281061_p48 | hypothetical protein | phrog_4387 | unknown function | unknown function | 1 | 33730 | 34068 |
| ASR84979.1 | MF281061_p47 | hypothetical protein | phrog_11327 | unknown function | unknown function | 1 | 33521 | 33733 |
| ASR85002.1 | MF281061_p73 | hypothetical protein | phrog_4550 | unknown function | unknown function | 1 | 46305 | 46478 |
| ASR85011.1 | MF281061_p55 | hypothetical protein | phrog_722 | unknown function | unknown function | 1 | 38040 | 38279 |
| ASR84950.1 | MF281061_p18 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 14662 | 16407 |
| ASR84990.1 | MF281061_p61 | hypothetical protein | phrog_5921 | unknown function | unknown function | 1 | 41148 | 41294 |
| ASR84997.1 | MF281061_p68 | hypothetical protein | phrog_7254 | unknown function | unknown function | 1 | 43815 | 44081 |
| ASR84984.1 | MF281061_p52 | hypothetical protein | phrog_3821 | unknown function | unknown function | 1 | 35865 | 36146 |
| ASR85005.1 | MF281061_p76 | hypothetical protein | phrog_18286 | unknown function | unknown function | 1 | 47058 | 47249 |
| ASR85004.1 | MF281061_p75 | HTH DNA binding domain protein | phrog_4738 | transcriptional repressor | transcription regulation | 1 | 46675 | 46848 |
| ASR85012.1 | MF281061_p60 | HTH DNA binding protein | phrog_7170 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 40541 | 41155 |
| ASR84948.1 | MF281061_p15 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 9957 | 10875 |
| ASR84995.1 | MF281061_p66 | HTH DNA binding protein | phrog_1408 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 42422 | 43291 |
| ASR85003.1 | MF281061_p74 | hypothetical protein | phrog_10254 | unknown function | unknown function | 1 | 46475 | 46666 |
| ASR84998.1 | MF281061_p69 | peptidase | phrog_908 | unknown function | unknown function | 1 | 44078 | 44980 |
| ASR84951.1 | MF281061_p19 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 16407 | 18143 |
| ASR84988.1 | MF281061_p57 | hypothetical protein | phrog_7789 | unknown function | unknown function | 1 | 39790 | 39879 |
| ASR84985.1 | MF281061_p53 | hypothetical protein | phrog_4899 | unknown function | unknown function | 1 | 36143 | 36700 |
| ASR84962.1 | MF281061_p30 | integrase | phrog_1 | integrase | integration and excision | -1 | 25933 | 26889 |
| ASR85001.1 | MF281061_p72 | hypothetical protein | phrog_2202 | unknown function | unknown function | 1 | 45982 | 46308 |
| ASR84965.1 | MF281061_p33 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 27720 | 27956 |
| ASR85010.1 | MF281061_p58 | DNA methylase | phrog_3008 | DNA methyltransferase | other | 1 | 39854 | 40105 |
| ASR84983.1 | MF281061_p51 | hypothetical protein | phrog_6109 | unknown function | unknown function | 1 | 35626 | 35868 |
| ASR84954.1 | MF281061_p22 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 21321 | 22358 |
| ASR85006.1 | MF281061_p77 | hypothetical protein | phrog_6617 | unknown function | unknown function | 1 | 47246 | 47503 |
| ASR84963.1 | MF281061_p31 | immunity repressor | phrog_2328 | transcriptional repressor | transcription regulation | -1 | 26960 | 27361 |
| ASR84939.1 | MF281061_p6 | major capsid protein | phrog_1650 | major head protein | head and packaging | 1 | 5294 | 6238 |
| ASR84952.1 | MF281061_p20 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 18166 | 19059 |
| ASR84986.1 | MF281061_p54 | hypothetical protein | phrog_15826 | unknown function | unknown function | 1 | 36693 | 37304 |
| ASR85009.1 | MF281061_p80 | HNH endonuclease | phrog_1808 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 48108 | 48491 |
| ASR84969.1 | MF281061_p37 | hypothetical protein | phrog_5015 | unknown function | unknown function | 1 | 29357 | 29752 |
| ASR84978.1 | MF281061_p46 | ssDNA binding protein | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 32550 | 33524 |
| ASR84959.1 | MF281061_p27 | lysin B | phrog_102 | endolysin | lysis | 1 | 24068 | 25234 |
| ASR84960.1 | MF281061_p28 | holin | phrog_443 | holin | lysis | 1 | 25256 | 25504 |
| ASR85000.1 | MF281061_p71 | hypothetical protein | phrog_7429 | unknown function | unknown function | 1 | 45706 | 45918 |
| ASR84975.1 | MF281061_p43 | hypothetical protein | phrog_5806 | unknown function | unknown function | 1 | 31264 | 31395 |
| ASR84981.1 | MF281061_p49 | DNA translocase | phrog_6152 | unknown function | unknown function | 1 | 34065 | 35132 |
| ASR84941.1 | MF281061_p8 | head-to-tail connector complex protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 6592 | 6954 |
| ASR84967.1 | MF281061_p35 | hypothetical protein | phrog_3507 | unknown function | unknown function | 1 | 28816 | 29115 |
| ASR84999.1 | MF281061_p70 | hypothetical protein | phrog_5855 | unknown function | unknown function | 1 | 45130 | 45630 |
| ASR84966.1 | MF281061_p34 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 27953 | 28819 |
| ASR84993.1 | MF281061_p64 | hypothetical protein | phrog_11096 | unknown function | unknown function | 1 | 42018 | 42290 |
| ASR84976.1 | MF281061_p44 | hypothetical protein | phrog_4702 | unknown function | unknown function | 1 | 31475 | 31630 |
| ASR84943.1 | MF281061_p10 | hypothetical protein | phrog_2322 | head-tail connector protein | connector | 1 | 7320 | 7643 |
| ASR84953.1 | MF281061_p21 | minor tail protein | phrog_3493 | minor tail protein | tail | 1 | 19060 | 21321 |
| ASR85013.1 | MF281061_p16 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 9957 | 10556 |
| ASR84968.1 | MF281061_p36 | hypothetical protein | phrog_9041 | unknown function | unknown function | 1 | 29112 | 29360 |
| ASR84940.1 | MF281061_p7 | hypothetical protein | phrog_2322 | head-tail connector protein | connector | 1 | 6238 | 6588 |
| ASR84974.1 | MF281061_p42 | hypothetical protein | phrog_5559 | unknown function | unknown function | 1 | 31088 | 31267 |
| ASR84982.1 | MF281061_p50 | resolvase | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 35129 | 35632 |
| ASR84956.1 | MF281061_p24 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 22539 | 22901 |
| ASR84977.1 | MF281061_p45 | exonuclease | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 31627 | 32553 |
| ASR84992.1 | MF281061_p63 | HNH endonuclease | phrog_1571 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 41638 | 42021 |
| ASR84991.1 | MF281061_p62 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 41294 | 41638 |
| ASR84946.1 | MF281061_p13 | head-to-tail connector complex protein | phrog_813 | head-tail adaptor | connector | 1 | 8322 | 8759 |
| ASR84970.1 | MF281061_p38 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 29814 | 30317 |
| ASR84989.1 | MF281061_p59 | DNA methylase | phrog_2060 | DNA methyltransferase | other | 1 | 40221 | 40544 |
| ASR84955.1 | MF281061_p23 | hypothetical protein | phrog_6374 | unknown function | unknown function | 1 | 22373 | 22522 |
| ASR84944.1 | MF281061_p11 | hypothetical protein | phrog_4307 | unknown function | unknown function | 1 | 7643 | 7912 |
| ASR84972.1 | MF281061_p40 | hypothetical protein | phrog_4981 | unknown function | unknown function | 1 | 30547 | 30822 |
| ASR84947.1 | MF281061_p14 | major tail protein | phrog_476 | major tail protein | tail | 1 | 8850 | 9848 |
| ASR84936.1 | MF281061_p3 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 2106 | 3560 |