Genomic map of Mycobacterium phage Ksquared (MF281061)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF281061
Definition
Mycobacterium phage Ksquared, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus; unclassified Fishburnevirus.
DB of origin
NUCCORE
Length
48699
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
80
%GC
67.09
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASR84934.1 MF281061_p1 terminase small subunit phrog_1496 terminase small subunit head and packaging 1 55 444
ASR84987.1 MF281061_p56 DNA methylase phrog_67 DNA methyltransferase other 1 38503 39714
ASR85008.1 MF281061_p79 hypothetical protein phrog_7285 unknown function unknown function 1 47855 48103
ASR84949.1 MF281061_p17 tape measure protein phrog_2337 tail length tape measure protein tail 1 10889 14665
ASR84964.1 MF281061_p32 excise phrog_66 excisionase and transcriptional regulator integration and excision 1 27490 27723
ASR84957.1 MF281061_p25 hypothetical protein phrog_1172 unknown function unknown function 1 22901 23071
ASR84994.1 MF281061_p65 hypothetical protein phrog_2451 unknown function unknown function 1 42287 42421
ASR84971.1 MF281061_p39 hypothetical protein phrog_4656 unknown function unknown function 1 30317 30550
ASR84961.1 MF281061_p29 hypothetical protein phrog_404 minor tail protein tail 1 25501 25860
ASR84942.1 MF281061_p9 head-to-tail connector complex protein phrog_6553 head closure Hc1 connector 1 6954 7304
ASR84973.1 MF281061_p41 hypothetical protein phrog_5803 unknown function unknown function 1 30819 31091
ASR84945.1 MF281061_p12 hypothetical protein phrog_2325 minor tail protein tail 1 7912 8325
ASR84938.1 MF281061_p5 scaffolding protein phrog_673 head scaffolding protein head and packaging 1 4892 5257
ASR84935.1 MF281061_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 413 2089
ASR84996.1 MF281061_p67 hypothetical protein phrog_3599 unknown function unknown function 1 43288 43818
ASR84937.1 MF281061_p4 capsid maturation protease phrog_2976 head maturation protease head and packaging 1 3551 4888
ASR85007.1 MF281061_p78 hypothetical protein phrog_1186 unknown function unknown function 1 47500 47868
ASR84958.1 MF281061_p26 lysin A phrog_6707 endolysin lysis 1 23142 24071
ASR84980.1 MF281061_p48 hypothetical protein phrog_4387 unknown function unknown function 1 33730 34068
ASR84979.1 MF281061_p47 hypothetical protein phrog_11327 unknown function unknown function 1 33521 33733
ASR85002.1 MF281061_p73 hypothetical protein phrog_4550 unknown function unknown function 1 46305 46478
ASR85011.1 MF281061_p55 hypothetical protein phrog_722 unknown function unknown function 1 38040 38279
ASR84950.1 MF281061_p18 minor tail protein phrog_106 minor tail protein tail 1 14662 16407
ASR84990.1 MF281061_p61 hypothetical protein phrog_5921 unknown function unknown function 1 41148 41294
ASR84997.1 MF281061_p68 hypothetical protein phrog_7254 unknown function unknown function 1 43815 44081
ASR84984.1 MF281061_p52 hypothetical protein phrog_3821 unknown function unknown function 1 35865 36146
ASR85005.1 MF281061_p76 hypothetical protein phrog_18286 unknown function unknown function 1 47058 47249
ASR85004.1 MF281061_p75 HTH DNA binding domain protein phrog_4738 transcriptional repressor transcription regulation 1 46675 46848
ASR85012.1 MF281061_p60 HTH DNA binding protein phrog_7170 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 40541 41155
ASR84948.1 MF281061_p15 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 9957 10875
ASR84995.1 MF281061_p66 HTH DNA binding protein phrog_1408 replication initiation protein DNA, RNA and nucleotide metabolism 1 42422 43291
ASR85003.1 MF281061_p74 hypothetical protein phrog_10254 unknown function unknown function 1 46475 46666
ASR84998.1 MF281061_p69 peptidase phrog_908 unknown function unknown function 1 44078 44980
ASR84951.1 MF281061_p19 minor tail protein phrog_110 minor tail protein tail 1 16407 18143
ASR84988.1 MF281061_p57 hypothetical protein phrog_7789 unknown function unknown function 1 39790 39879
ASR84985.1 MF281061_p53 hypothetical protein phrog_4899 unknown function unknown function 1 36143 36700
ASR84962.1 MF281061_p30 integrase phrog_1 integrase integration and excision -1 25933 26889
ASR85001.1 MF281061_p72 hypothetical protein phrog_2202 unknown function unknown function 1 45982 46308
ASR84965.1 MF281061_p33 hypothetical protein phrog_1622 unknown function unknown function 1 27720 27956
ASR85010.1 MF281061_p58 DNA methylase phrog_3008 DNA methyltransferase other 1 39854 40105
ASR84983.1 MF281061_p51 hypothetical protein phrog_6109 unknown function unknown function 1 35626 35868
ASR84954.1 MF281061_p22 minor tail protein phrog_416 minor tail protein tail 1 21321 22358
ASR85006.1 MF281061_p77 hypothetical protein phrog_6617 unknown function unknown function 1 47246 47503
ASR84963.1 MF281061_p31 immunity repressor phrog_2328 transcriptional repressor transcription regulation -1 26960 27361
ASR84939.1 MF281061_p6 major capsid protein phrog_1650 major head protein head and packaging 1 5294 6238
ASR84952.1 MF281061_p20 minor tail protein phrog_732 minor tail protein tail 1 18166 19059
ASR84986.1 MF281061_p54 hypothetical protein phrog_15826 unknown function unknown function 1 36693 37304
ASR85009.1 MF281061_p80 HNH endonuclease phrog_1808 HNH endonuclease DNA, RNA and nucleotide metabolism 1 48108 48491
ASR84969.1 MF281061_p37 hypothetical protein phrog_5015 unknown function unknown function 1 29357 29752
ASR84978.1 MF281061_p46 ssDNA binding protein phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 32550 33524
ASR84959.1 MF281061_p27 lysin B phrog_102 endolysin lysis 1 24068 25234
ASR84960.1 MF281061_p28 holin phrog_443 holin lysis 1 25256 25504
ASR85000.1 MF281061_p71 hypothetical protein phrog_7429 unknown function unknown function 1 45706 45918
ASR84975.1 MF281061_p43 hypothetical protein phrog_5806 unknown function unknown function 1 31264 31395
ASR84981.1 MF281061_p49 DNA translocase phrog_6152 unknown function unknown function 1 34065 35132
ASR84941.1 MF281061_p8 head-to-tail connector complex protein phrog_137 head-tail adaptor Ad1 connector 1 6592 6954
ASR84967.1 MF281061_p35 hypothetical protein phrog_3507 unknown function unknown function 1 28816 29115
ASR84999.1 MF281061_p70 hypothetical protein phrog_5855 unknown function unknown function 1 45130 45630
ASR84966.1 MF281061_p34 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 27953 28819
ASR84993.1 MF281061_p64 hypothetical protein phrog_11096 unknown function unknown function 1 42018 42290
ASR84976.1 MF281061_p44 hypothetical protein phrog_4702 unknown function unknown function 1 31475 31630
ASR84943.1 MF281061_p10 hypothetical protein phrog_2322 head-tail connector protein connector 1 7320 7643
ASR84953.1 MF281061_p21 minor tail protein phrog_3493 minor tail protein tail 1 19060 21321
ASR85013.1 MF281061_p16 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 9957 10556
ASR84968.1 MF281061_p36 hypothetical protein phrog_9041 unknown function unknown function 1 29112 29360
ASR84940.1 MF281061_p7 hypothetical protein phrog_2322 head-tail connector protein connector 1 6238 6588
ASR84974.1 MF281061_p42 hypothetical protein phrog_5559 unknown function unknown function 1 31088 31267
ASR84982.1 MF281061_p50 resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 35129 35632
ASR84956.1 MF281061_p24 hypothetical protein phrog_240 head protein head and packaging 1 22539 22901
ASR84977.1 MF281061_p45 exonuclease phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 31627 32553
ASR84992.1 MF281061_p63 HNH endonuclease phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41638 42021
ASR84991.1 MF281061_p62 hypothetical protein phrog_464 unknown function unknown function 1 41294 41638
ASR84946.1 MF281061_p13 head-to-tail connector complex protein phrog_813 head-tail adaptor connector 1 8322 8759
ASR84970.1 MF281061_p38 hypothetical protein phrog_658 unknown function unknown function 1 29814 30317
ASR84989.1 MF281061_p59 DNA methylase phrog_2060 DNA methyltransferase other 1 40221 40544
ASR84955.1 MF281061_p23 hypothetical protein phrog_6374 unknown function unknown function 1 22373 22522
ASR84944.1 MF281061_p11 hypothetical protein phrog_4307 unknown function unknown function 1 7643 7912
ASR84972.1 MF281061_p40 hypothetical protein phrog_4981 unknown function unknown function 1 30547 30822
ASR84947.1 MF281061_p14 major tail protein phrog_476 major tail protein tail 1 8850 9848
ASR84936.1 MF281061_p3 portal protein phrog_113 portal protein head and packaging 1 2106 3560