Genomic map of Leclercia phage 10164RH (MF285617)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF285617
Definition
Leclercia phage 10164RH, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Teetrevirus; unclassified Teetrevirus.
DB of origin
NUCCORE
Length
39300
Host Name
Leclercia adecarboxylata
Host domain
Bacteria
Is prophage?
undef
Number of proteins
46
%GC
50.77
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATA65315.1 MF285617_p26 hypothetical protein phrog_4790 host RecBCD nuclease inhibitor moron, auxiliary metabolic gene and host takeover 1 16671 16853
ATA65329.1 MF285617_p40 hypothetical protein phrog_342 internal virion protein with endolysin domain head and packaging 1 29191 33153
ATA65312.1 MF285617_p23 hypothetical protein singleton unknown function unknown function -1 15913 16161
ATA65295.1 MF285617_p6 RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 3531 6185
ATA65335.1 MF285617_p46 hypothetical protein phrog_38 terminase large subunit head and packaging 1 36556 38319
ATA65322.1 MF285617_p33 hypothetical protein phrog_1052 head assembly head and packaging 1 20518 21450
ATA65317.1 MF285617_p28 hypothetical protein phrog_5008 unknown function unknown function 1 17743 17856
ATA65302.1 MF285617_p13 hypothetical protein phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism 1 8941 9105
ATA65333.1 MF285617_p44 hypothetical protein phrog_1351 terminase small subunit head and packaging 1 35773 36039
ATA65331.1 MF285617_p42 tail fiber assembly protein phrog_136 tail fiber assembly protein tail 1 34980 35507
ATA65300.1 MF285617_p11 hypothetical protein phrog_35442 unknown function unknown function 1 8281 8811
ATA65324.1 MF285617_p35 hypothetical protein phrog_446 tail protein tail 1 22836 23426
ATA65307.1 MF285617_p18 hypothetical protein phrog_23725 unknown function unknown function 1 11390 11545
ATA65293.1 MF285617_p4 hypothetical protein phrog_2385 unknown function unknown function 1 1982 2179
ATA65316.1 MF285617_p27 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 16850 17761
ATA65319.1 MF285617_p30 hypothetical protein phrog_1391 unknown function unknown function 1 18199 18450
ATA65297.1 MF285617_p8 hypothetical protein phrog_2949 dGTPase inhibitor; target for F exclusion other 1 6435 6713
ATA65303.1 MF285617_p14 single-stranded DNA-binding protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 9158 9856
ATA65292.1 MF285617_p3 hypothetical protein phrog_17444 unknown function unknown function 1 1878 1985
ATA65321.1 MF285617_p32 head-to-tail joining protein phrog_449 head-tail adaptor connector 1 18809 20416
ATA65334.1 MF285617_p45 hypothetical protein phrog_1327 Rz-like spanin lysis 1 36117 36581
ATA65290.1 MF285617_p1 S-adenosyl-L-methionine hydrolase phrog_2226 SAM-dependent methyltransferase other 1 915 1373
ATA65298.1 MF285617_p9 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 6793 7854
ATA65309.1 MF285617_p20 hypothetical protein phrog_1950 unknown function unknown function 1 13152 13364
ATA65313.1 MF285617_p24 hypothetical protein phrog_1452 Gp5.5-like host HNS inhibition moron, auxiliary metabolic gene and host takeover 1 16163 16468
ATA65332.1 MF285617_p43 lysis protein phrog_920 holin lysis 1 35566 35769
ATA65328.1 MF285617_p39 hypothetical protein phrog_1339 internal virion protein head and packaging 1 26929 29172
ATA65301.1 MF285617_p12 hypothetical protein phrog_1312 unknown function unknown function 1 8808 8954
ATA65296.1 MF285617_p7 hypothetical protein phrog_2490 unknown function unknown function 1 6295 6435
ATA65294.1 MF285617_p5 protein kinase phrog_2828 serine-threonine kinase other 1 2351 3460
ATA65326.1 MF285617_p37 hypothetical protein phrog_308 internal virion protein head and packaging 1 25920 26330
ATA65304.1 MF285617_p15 hypothetical protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 9853 10308
ATA65325.1 MF285617_p36 hypothetical protein phrog_457 tail protein tail 1 23442 25847
ATA65318.1 MF285617_p29 hypothetical protein phrog_1447 unknown function unknown function 1 17949 18194
ATA65291.1 MF285617_p2 hypothetical protein phrog_6500 unknown function unknown function 1 1499 1795
ATA65323.1 MF285617_p34 hypothetical protein phrog_267 major head protein head and packaging 1 21607 22647
ATA65314.1 MF285617_p25 hypothetical protein phrog_1334 unknown function unknown function 1 16465 16674
ATA65299.1 MF285617_p10 hypothetical protein phrog_1777 unknown function unknown function 1 8024 8281
ATA65311.1 MF285617_p22 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 13729 15843
ATA65306.1 MF285617_p17 N-acetylmuramoyl-L-alanine amidase phrog_822 amidase lysis 1 10722 11177
ATA65327.1 MF285617_p38 internal virion protein B phrog_805 internal virion protein head and packaging 1 26342 26926
ATA65320.1 MF285617_p31 hypothetical protein phrog_1320 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 18478 18798
ATA65308.1 MF285617_p19 helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 11542 13056
ATA65305.1 MF285617_p16 endonuclease phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 10272 10721
ATA65310.1 MF285617_p21 hypothetical protein phrog_2254 unknown function unknown function 1 13377 13661
ATA65330.1 MF285617_p41 tail fiber protein phrog_4242 tail fiber protein tail 1 33201 34967