| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF285617 |
Definition |
Leclercia phage 10164RH, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Teetrevirus; unclassified Teetrevirus. |
DB of origin |
NUCCORE |
Length |
39300 |
Host Name |
Leclercia adecarboxylata |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
46 |
%GC |
50.77 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATA65315.1 | MF285617_p26 | hypothetical protein | phrog_4790 | host RecBCD nuclease inhibitor | moron, auxiliary metabolic gene and host takeover | 1 | 16671 | 16853 |
| ATA65329.1 | MF285617_p40 | hypothetical protein | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 29191 | 33153 |
| ATA65312.1 | MF285617_p23 | hypothetical protein | singleton | unknown function | unknown function | -1 | 15913 | 16161 |
| ATA65295.1 | MF285617_p6 | RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 3531 | 6185 |
| ATA65335.1 | MF285617_p46 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | 1 | 36556 | 38319 |
| ATA65322.1 | MF285617_p33 | hypothetical protein | phrog_1052 | head assembly | head and packaging | 1 | 20518 | 21450 |
| ATA65317.1 | MF285617_p28 | hypothetical protein | phrog_5008 | unknown function | unknown function | 1 | 17743 | 17856 |
| ATA65302.1 | MF285617_p13 | hypothetical protein | phrog_1307 | RNA polymerase inhibitor | DNA, RNA and nucleotide metabolism | 1 | 8941 | 9105 |
| ATA65333.1 | MF285617_p44 | hypothetical protein | phrog_1351 | terminase small subunit | head and packaging | 1 | 35773 | 36039 |
| ATA65331.1 | MF285617_p42 | tail fiber assembly protein | phrog_136 | tail fiber assembly protein | tail | 1 | 34980 | 35507 |
| ATA65300.1 | MF285617_p11 | hypothetical protein | phrog_35442 | unknown function | unknown function | 1 | 8281 | 8811 |
| ATA65324.1 | MF285617_p35 | hypothetical protein | phrog_446 | tail protein | tail | 1 | 22836 | 23426 |
| ATA65307.1 | MF285617_p18 | hypothetical protein | phrog_23725 | unknown function | unknown function | 1 | 11390 | 11545 |
| ATA65293.1 | MF285617_p4 | hypothetical protein | phrog_2385 | unknown function | unknown function | 1 | 1982 | 2179 |
| ATA65316.1 | MF285617_p27 | exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 16850 | 17761 |
| ATA65319.1 | MF285617_p30 | hypothetical protein | phrog_1391 | unknown function | unknown function | 1 | 18199 | 18450 |
| ATA65297.1 | MF285617_p8 | hypothetical protein | phrog_2949 | dGTPase inhibitor; target for F exclusion | other | 1 | 6435 | 6713 |
| ATA65303.1 | MF285617_p14 | single-stranded DNA-binding protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 9158 | 9856 |
| ATA65292.1 | MF285617_p3 | hypothetical protein | phrog_17444 | unknown function | unknown function | 1 | 1878 | 1985 |
| ATA65321.1 | MF285617_p32 | head-to-tail joining protein | phrog_449 | head-tail adaptor | connector | 1 | 18809 | 20416 |
| ATA65334.1 | MF285617_p45 | hypothetical protein | phrog_1327 | Rz-like spanin | lysis | 1 | 36117 | 36581 |
| ATA65290.1 | MF285617_p1 | S-adenosyl-L-methionine hydrolase | phrog_2226 | SAM-dependent methyltransferase | other | 1 | 915 | 1373 |
| ATA65298.1 | MF285617_p9 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 6793 | 7854 |
| ATA65309.1 | MF285617_p20 | hypothetical protein | phrog_1950 | unknown function | unknown function | 1 | 13152 | 13364 |
| ATA65313.1 | MF285617_p24 | hypothetical protein | phrog_1452 | Gp5.5-like host HNS inhibition | moron, auxiliary metabolic gene and host takeover | 1 | 16163 | 16468 |
| ATA65332.1 | MF285617_p43 | lysis protein | phrog_920 | holin | lysis | 1 | 35566 | 35769 |
| ATA65328.1 | MF285617_p39 | hypothetical protein | phrog_1339 | internal virion protein | head and packaging | 1 | 26929 | 29172 |
| ATA65301.1 | MF285617_p12 | hypothetical protein | phrog_1312 | unknown function | unknown function | 1 | 8808 | 8954 |
| ATA65296.1 | MF285617_p7 | hypothetical protein | phrog_2490 | unknown function | unknown function | 1 | 6295 | 6435 |
| ATA65294.1 | MF285617_p5 | protein kinase | phrog_2828 | serine-threonine kinase | other | 1 | 2351 | 3460 |
| ATA65326.1 | MF285617_p37 | hypothetical protein | phrog_308 | internal virion protein | head and packaging | 1 | 25920 | 26330 |
| ATA65304.1 | MF285617_p15 | hypothetical protein | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 9853 | 10308 |
| ATA65325.1 | MF285617_p36 | hypothetical protein | phrog_457 | tail protein | tail | 1 | 23442 | 25847 |
| ATA65318.1 | MF285617_p29 | hypothetical protein | phrog_1447 | unknown function | unknown function | 1 | 17949 | 18194 |
| ATA65291.1 | MF285617_p2 | hypothetical protein | phrog_6500 | unknown function | unknown function | 1 | 1499 | 1795 |
| ATA65323.1 | MF285617_p34 | hypothetical protein | phrog_267 | major head protein | head and packaging | 1 | 21607 | 22647 |
| ATA65314.1 | MF285617_p25 | hypothetical protein | phrog_1334 | unknown function | unknown function | 1 | 16465 | 16674 |
| ATA65299.1 | MF285617_p10 | hypothetical protein | phrog_1777 | unknown function | unknown function | 1 | 8024 | 8281 |
| ATA65311.1 | MF285617_p22 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 13729 | 15843 |
| ATA65306.1 | MF285617_p17 | N-acetylmuramoyl-L-alanine amidase | phrog_822 | amidase | lysis | 1 | 10722 | 11177 |
| ATA65327.1 | MF285617_p38 | internal virion protein B | phrog_805 | internal virion protein | head and packaging | 1 | 26342 | 26926 |
| ATA65320.1 | MF285617_p31 | hypothetical protein | phrog_1320 | host range and adsorption protein | moron, auxiliary metabolic gene and host takeover | 1 | 18478 | 18798 |
| ATA65308.1 | MF285617_p19 | helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 11542 | 13056 |
| ATA65305.1 | MF285617_p16 | endonuclease | phrog_945 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 10272 | 10721 |
| ATA65310.1 | MF285617_p21 | hypothetical protein | phrog_2254 | unknown function | unknown function | 1 | 13377 | 13661 |
| ATA65330.1 | MF285617_p41 | tail fiber protein | phrog_4242 | tail fiber protein | tail | 1 | 33201 | 34967 |