| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF285620 |
Definition |
Serratia phage 2050H2, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Teetrevirus; Serratia virus 2050H2. |
DB of origin |
NUCCORE |
Length |
39216 |
Host Name |
Serratia marcescens |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
43 |
%GC |
50.41 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASZ78993.1 | MF285620_p14 | bacterial RNA polymerase inhibitor | phrog_1307 | RNA polymerase inhibitor | DNA, RNA and nucleotide metabolism | 1 | 9313 | 9549 |
| ASZ79009.1 | MF285620_p30 | head-to-tail joining protein | phrog_449 | head-tail adaptor | connector | 1 | 18977 | 20584 |
| ASZ79014.1 | MF285620_p35 | hypothetical protein | phrog_308 | internal virion protein | head and packaging | 1 | 26088 | 26498 |
| ASZ78994.1 | MF285620_p15 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 9602 | 10300 |
| ASZ78984.1 | MF285620_p5 | protein kinase | phrog_2828 | serine-threonine kinase | other | 1 | 2346 | 3455 |
| ASZ78989.1 | MF285620_p10 | hypothetical protein | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 7132 | 8193 |
| ASZ79000.1 | MF285620_p21 | hypothetical protein | phrog_2254 | unknown function | unknown function | 1 | 13848 | 14132 |
| ASZ78999.1 | MF285620_p20 | hypothetical protein | phrog_1950 | unknown function | unknown function | 1 | 13623 | 13835 |
| ASZ79004.1 | MF285620_p25 | hypothetical protein | phrog_4790 | host RecBCD nuclease inhibitor | moron, auxiliary metabolic gene and host takeover | 1 | 16839 | 17021 |
| ASZ79002.1 | MF285620_p23 | hypothetical protein | phrog_1452 | Gp5.5-like host HNS inhibition | moron, auxiliary metabolic gene and host takeover | 1 | 16334 | 16633 |
| ASZ79011.1 | MF285620_p32 | hypothetical protein | phrog_267 | major head protein | head and packaging | 1 | 21775 | 22815 |
| ASZ78991.1 | MF285620_p12 | hypothetical protein | phrog_4943 | unknown function | unknown function | 1 | 8620 | 9192 |
| ASZ78997.1 | MF285620_p18 | N-acetylmuramoyl-L-alanine amidase | phrog_822 | amidase | lysis | 1 | 11188 | 11643 |
| ASZ79020.1 | MF285620_p41 | hypothetical protein | phrog_1351 | terminase small subunit | head and packaging | 1 | 35589 | 35855 |
| ASZ79012.1 | MF285620_p33 | hypothetical protein | phrog_446 | tail protein | tail | 1 | 23004 | 23594 |
| ASZ79019.1 | MF285620_p40 | lysis protein | phrog_920 | holin | lysis | 1 | 35382 | 35585 |
| ASZ78998.1 | MF285620_p19 | DNA primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 11823 | 13523 |
| ASZ79010.1 | MF285620_p31 | hypothetical protein | phrog_1052 | head assembly | head and packaging | 1 | 20686 | 21618 |
| ASZ79015.1 | MF285620_p36 | internal virion protein B | phrog_805 | internal virion protein | head and packaging | 1 | 26510 | 27094 |
| ASZ78996.1 | MF285620_p17 | endonuclease | phrog_945 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 10738 | 11187 |
| ASZ79001.1 | MF285620_p22 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 14200 | 16314 |
| ASZ78983.1 | MF285620_p4 | hypothetical protein | phrog_2385 | unknown function | unknown function | 1 | 1977 | 2174 |
| ASZ79005.1 | MF285620_p26 | exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 17018 | 17932 |
| ASZ79017.1 | MF285620_p38 | hypothetical protein | phrog_342 | internal virion protein with endolysin domain | head and packaging | 1 | 29363 | 33331 |
| ASZ79016.1 | MF285620_p37 | internal virion protein C | phrog_1339 | internal virion protein | head and packaging | 1 | 27097 | 29340 |
| ASZ79007.1 | MF285620_p28 | hypothetical protein | phrog_1391 | unknown function | unknown function | 1 | 18368 | 18619 |
| ASZ79008.1 | MF285620_p29 | host range protein | phrog_1320 | host range and adsorption protein | moron, auxiliary metabolic gene and host takeover | 1 | 18646 | 18966 |
| ASZ79013.1 | MF285620_p34 | hypothetical protein | phrog_457 | tail protein | tail | 1 | 23610 | 26015 |
| ASZ78980.1 | MF285620_p1 | S-adenosyl-L-methionine hydrolase | phrog_2226 | SAM-dependent methyltransferase | other | 1 | 1022 | 1480 |
| ASZ78987.1 | MF285620_p8 | hypothetical protein | phrog_2490 | unknown function | unknown function | 1 | 6632 | 6772 |
| ASZ78992.1 | MF285620_p13 | hypothetical protein | phrog_1312 | unknown function | unknown function | 1 | 9179 | 9316 |
| ASZ78990.1 | MF285620_p11 | hypothetical protein | phrog_1777 | unknown function | unknown function | 1 | 8363 | 8620 |
| ASZ78995.1 | MF285620_p16 | homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 10304 | 10774 |
| ASZ78981.1 | MF285620_p2 | hypothetical protein | phrog_9817 | unknown function | unknown function | 1 | 1552 | 1836 |
| ASZ79022.1 | MF285620_p43 | hypothetical protein | phrog_2633 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 36418 | 36843 |
| ASZ78985.1 | MF285620_p6 | DNA-directed RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 3526 | 6180 |
| ASZ78986.1 | MF285620_p7 | hypothetical protein | phrog_6379 | unknown function | unknown function | 1 | 6267 | 6539 |
| ASZ79021.1 | MF285620_p42 | hypothetical protein | phrog_1327 | Rz-like spanin | lysis | 1 | 35933 | 36418 |
| ASZ79006.1 | MF285620_p27 | hypothetical protein | phrog_1447 | unknown function | unknown function | 1 | 18118 | 18363 |
| ASZ78988.1 | MF285620_p9 | hypothetical protein | phrog_2949 | dGTPase inhibitor; target for F exclusion | other | 1 | 6772 | 7050 |
| ASZ79018.1 | MF285620_p39 | tail fiber protein | phrog_9502 | tail fiber protein | tail | 1 | 33385 | 35370 |
| ASZ79003.1 | MF285620_p24 | hypothetical protein | phrog_1334 | unknown function | unknown function | 1 | 16633 | 16842 |
| ASZ78982.1 | MF285620_p3 | hypothetical protein | phrog_17444 | unknown function | unknown function | 1 | 1873 | 1980 |