| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF319184 |
Definition |
Mycobacterium phage GenevaB15, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Mclasvirinae; Reyvirus; unclassified Reyvirus. |
DB of origin |
NUCCORE |
Length |
80123 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
144 |
%GC |
60.78 |
Number of singletons |
7 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASR75894.1 | MF319184_p47 | hypothetical protein | phrog_15787 | unknown function | unknown function | -1 | 34808 | 35119 |
| ASR75924.1 | MF319184_p78 | hypothetical protein | phrog_1821 | transcriptional regulator WhiB-like | transcription regulation | 1 | 48177 | 48524 |
| ASR75854.1 | MF319184_p7 | hypothetical protein | phrog_3641 | unknown function | unknown function | -1 | 2391 | 2636 |
| ASR75955.1 | MF319184_p109 | hypothetical protein | phrog_27300 | unknown function | unknown function | 1 | 62547 | 62741 |
| ASR75949.1 | MF319184_p103 | hypothetical protein | phrog_15606 | unknown function | unknown function | 1 | 56364 | 56573 |
| ASR75951.1 | MF319184_p105 | hypothetical protein | phrog_17015 | unknown function | unknown function | 1 | 59479 | 59625 |
| ASR75922.1 | MF319184_p76 | hypothetical protein | phrog_10293 | unknown function | unknown function | 1 | 46427 | 46984 |
| ASR75942.1 | MF319184_p96 | hypothetical protein | phrog_10666 | unknown function | unknown function | 1 | 54492 | 54797 |
| ASR75967.1 | MF319184_p121 | hypothetical protein | phrog_6582 | unknown function | unknown function | 1 | 67993 | 68220 |
| ASR75853.1 | MF319184_p6 | hypothetical protein | phrog_3641 | unknown function | unknown function | -1 | 2188 | 2394 |
| ASR75918.1 | MF319184_p72 | hypothetical protein | phrog_18647 | unknown function | unknown function | 1 | 45041 | 45259 |
| ASR75900.1 | MF319184_p53 | hypothetical protein | phrog_4870 | unknown function | unknown function | -1 | 36754 | 37071 |
| ASR75907.1 | MF319184_p60 | ERF family ssDNA binding protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 40496 | 41239 |
| ASR75886.1 | MF319184_p39 | minor tail protein | phrog_3856 | minor tail protein | tail | 1 | 29938 | 30933 |
| ASR75880.1 | MF319184_p33 | minor tail protein | phrog_4413 | minor tail protein | tail | 1 | 24749 | 25204 |
| ASR75957.1 | MF319184_p111 | hypothetical protein | phrog_30901 | unknown function | unknown function | 1 | 64054 | 64323 |
| ASR75884.1 | MF319184_p37 | minor tail protein | phrog_2005 | minor tail protein | tail | 1 | 29338 | 29598 |
| ASR75946.1 | MF319184_p100 | hypothetical protein | phrog_3491 | unknown function | unknown function | 1 | 55391 | 55651 |
| ASR75872.1 | MF319184_p25 | head-to-tail connector protein | phrog_5210 | neck protein | connector | 1 | 12434 | 12850 |
| ASR75850.1 | MF319184_p3 | hypothetical protein | phrog_4480 | unknown function | unknown function | -1 | 1203 | 1517 |
| ASR75876.1 | MF319184_p28 | tail assembly chaperone | phrog_2624 | tail assembly chaperone | tail | 1 | 14380 | 15218 |
| ASR75852.1 | MF319184_p5 | hypothetical protein | phrog_16500 | unknown function | unknown function | -1 | 2027 | 2200 |
| ASR75860.1 | MF319184_p13 | hypothetical protein | phrog_6582 | unknown function | unknown function | -1 | 3752 | 4042 |
| ASR75878.1 | MF319184_p31 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 22046 | 22957 |
| ASR75905.1 | MF319184_p58 | hypothetical protein | phrog_11487 | unknown function | unknown function | 1 | 39808 | 40152 |
| ASR75915.1 | MF319184_p69 | hypothetical protein | phrog_10063 | unknown function | unknown function | 1 | 43945 | 44274 |
| ASR75863.1 | MF319184_p16 | hypothetical protein | phrog_14015 | unknown function | unknown function | 1 | 4646 | 4966 |
| ASR75861.1 | MF319184_p14 | hypothetical protein | phrog_6582 | unknown function | unknown function | -1 | 4039 | 4266 |
| ASR75932.1 | MF319184_p86 | hypothetical protein | phrog_33059 | unknown function | unknown function | 1 | 51322 | 51507 |
| ASR75916.1 | MF319184_p70 | hypothetical protein | phrog_13460 | unknown function | unknown function | 1 | 44258 | 44590 |
| ASR75901.1 | MF319184_p54 | nucleotidyl transferase | phrog_388 | nucleotidyltransferase | DNA, RNA and nucleotide metabolism | -1 | 37068 | 37868 |
| ASR75857.1 | MF319184_p10 | hypothetical protein | phrog_14568 | unknown function | unknown function | -1 | 3002 | 3259 |
| ASR75945.1 | MF319184_p99 | hypothetical protein | phrog_15456 | unknown function | unknown function | 1 | 55158 | 55394 |
| ASR75862.1 | MF319184_p15 | hypothetical protein | phrog_15938 | unknown function | unknown function | -1 | 4263 | 4550 |
| ASR75940.1 | MF319184_p94 | HNH endonuclease | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 53866 | 54384 |
| ASR75931.1 | MF319184_p85 | hypothetical protein | phrog_16095 | unknown function | unknown function | 1 | 51044 | 51325 |
| ASR75953.1 | MF319184_p107 | hypothetical protein | phrog_15799 | unknown function | unknown function | 1 | 60639 | 60890 |
| ASR75909.1 | MF319184_p63 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 41623 | 42369 |
| ASR75938.1 | MF319184_p92 | hypothetical protein | phrog_8107 | unknown function | unknown function | 1 | 53506 | 53613 |
| ASR75972.1 | MF319184_p126 | hypothetical protein | phrog_16009 | unknown function | unknown function | -1 | 70973 | 71227 |
| ASR75912.1 | MF319184_p66 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43279 | 43422 |
| ASR75958.1 | MF319184_p112 | PTPc tyrosine phosphatase | phrog_10650 | dual specificity phosphatase | other | 1 | 64320 | 64826 |
| ASR75934.1 | MF319184_p88 | hypothetical protein | phrog_27400 | unknown function | unknown function | 1 | 52094 | 52249 |
| ASR75944.1 | MF319184_p98 | hypothetical protein | phrog_1673 | unknown function | unknown function | 1 | 54973 | 55158 |
| ASR75939.1 | MF319184_p93 | hypothetical protein | phrog_25903 | unknown function | unknown function | 1 | 53613 | 53795 |
| ASR75865.1 | MF319184_p18 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 5321 | 6862 |
| ASR75965.1 | MF319184_p119 | hypothetical protein | phrog_15548 | unknown function | unknown function | 1 | 67137 | 67319 |
| ASR75890.1 | MF319184_p43 | lysin B | phrog_102 | endolysin | lysis | 1 | 32938 | 33918 |
| ASR75977.1 | MF319184_p131 | hypothetical protein | phrog_14784 | unknown function | unknown function | -1 | 73346 | 73828 |
| ASR75961.1 | MF319184_p115 | hypothetical protein | phrog_36620 | unknown function | unknown function | 1 | 65442 | 65681 |
| ASR75881.1 | MF319184_p34 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 25208 | 27889 |
| ASR75935.1 | MF319184_p89 | DNA polymerase III subunit | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 52246 | 53046 |
| ASR75902.1 | MF319184_p55 | hypothetical protein | phrog_15331 | unknown function | unknown function | -1 | 37865 | 38605 |
| ASR75978.1 | MF319184_p132 | hypothetical protein | phrog_2869 | unknown function | unknown function | -1 | 74017 | 74265 |
| ASR75908.1 | MF319184_p61 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41236 | 41400 |
| ASR75989.1 | MF319184_p144 | hypothetical protein | phrog_7225 | unknown function | unknown function | -1 | 78126 | 78350 |
| ASR75923.1 | MF319184_p77 | dsDNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 47038 | 48180 |
| ASR75870.1 | MF319184_p23 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 11594 | 12076 |
| ASR75855.1 | MF319184_p8 | hypothetical protein | phrog_24628 | unknown function | unknown function | -1 | 2645 | 2854 |
| ASR75895.1 | MF319184_p48 | hypothetical protein | phrog_8313 | unknown function | unknown function | -1 | 35116 | 35796 |
| ASR75917.1 | MF319184_p71 | hypothetical protein | phrog_13394 | unknown function | unknown function | 1 | 44574 | 45044 |
| ASR75882.1 | MF319184_p35 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 27886 | 28968 |
| ASR75858.1 | MF319184_p11 | hypothetical protein | phrog_14674 | unknown function | unknown function | -1 | 3247 | 3519 |
| ASR75969.1 | MF319184_p123 | hypothetical protein | phrog_18619 | unknown function | unknown function | 1 | 68461 | 69006 |
| ASR75937.1 | MF319184_p91 | hypothetical protein | phrog_13413 | unknown function | unknown function | 1 | 53294 | 53509 |
| ASR75896.1 | MF319184_p49 | hypothetical protein | phrog_6624 | unknown function | unknown function | -1 | 35760 | 35951 |
| ASR75899.1 | MF319184_p52 | hypothetical protein | phrog_419 | unknown function | unknown function | -1 | 36458 | 36757 |
| ASR75976.1 | MF319184_p130 | hypothetical protein | phrog_14728 | unknown function | unknown function | -1 | 73019 | 73231 |
| ASR75883.1 | MF319184_p36 | minor tail protein | phrog_240 | head protein | head and packaging | 1 | 28984 | 29328 |
| ASR75859.1 | MF319184_p12 | hypothetical protein | singleton | unknown function | unknown function | -1 | 3516 | 3755 |
| ASR75956.1 | MF319184_p110 | RNA terminal phosphate cyclase | phrog_1075 | tRNA splicing ligase | DNA, RNA and nucleotide metabolism | 1 | 62812 | 64053 |
| ASR75910.1 | MF319184_p64 | hypothetical protein | phrog_14665 | unknown function | unknown function | 1 | 42366 | 42686 |
| ASR75959.1 | MF319184_p113 | hypothetical protein | phrog_22497 | unknown function | unknown function | 1 | 65030 | 65236 |
| ASR75963.1 | MF319184_p117 | hypothetical protein | phrog_15844 | unknown function | unknown function | 1 | 66425 | 66658 |
| ASR75990.1 | MF319184_p134 | hypothetical protein | phrog_9783 | unknown function | unknown function | -1 | 74629 | 74793 |
| ASR75984.1 | MF319184_p139 | hypothetical protein | phrog_2554 | unknown function | unknown function | -1 | 75913 | 76620 |
| ASR75991.1 | MF319184_p62 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41400 | 41456 |
| ASR75867.1 | MF319184_p20 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 8460 | 9641 |
| ASR75904.1 | MF319184_p57 | hypothetical protein | phrog_15756 | unknown function | unknown function | 1 | 39526 | 39789 |
| ASR75954.1 | MF319184_p108 | hypothetical protein | phrog_5101 | unknown function | unknown function | 1 | 62131 | 62547 |
| ASR75871.1 | MF319184_p24 | head-to-tail connector protein | phrog_10309 | head-tail connector protein | connector | 1 | 12073 | 12441 |
| ASR75948.1 | MF319184_p102 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 55956 | 56279 |
| ASR75888.1 | MF319184_p41 | hypothetical protein | phrog_16125 | unknown function | unknown function | 1 | 32355 | 32546 |
| ASR75985.1 | MF319184_p140 | hypothetical protein | phrog_11293 | unknown function | unknown function | -1 | 76710 | 77171 |
| ASR75975.1 | MF319184_p129 | hypothetical protein | phrog_1338 | unknown function | unknown function | -1 | 72717 | 73022 |
| ASR75925.1 | MF319184_p79 | holliday junction resolvase | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 48719 | 49120 |
| ASR75875.1 | MF319184_p29 | tail assembly chaperone | phrog_4464 | tail assembly chaperone | tail | 1 | 14380 | 14721 |
| ASR75980.1 | MF319184_p135 | hypothetical protein | phrog_37234 | unknown function | unknown function | -1 | 74827 | 75000 |
| ASR75873.1 | MF319184_p26 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 12859 | 13371 |
| ASR75933.1 | MF319184_p87 | hypothetical protein | phrog_11257 | unknown function | unknown function | 1 | 51504 | 52097 |
| ASR75866.1 | MF319184_p19 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 6859 | 8460 |
| ASR75968.1 | MF319184_p122 | hypothetical protein | phrog_17078 | unknown function | unknown function | 1 | 68217 | 68474 |
| ASR75892.1 | MF319184_p45 | hypothetical protein | phrog_32351 | unknown function | unknown function | -1 | 34237 | 34395 |
| ASR75877.1 | MF319184_p30 | tape measure protein | phrog_3547 | tail length tape measure protein | tail | 1 | 15222 | 22046 |
| ASR75911.1 | MF319184_p65 | protease | phrog_94 | head maturation protease | head and packaging | 1 | 42683 | 43279 |
| ASR75889.1 | MF319184_p42 | holin | phrog_16417 | holin | lysis | 1 | 32543 | 32869 |
| ASR75887.1 | MF319184_p40 | lysin A | phrog_700 | endolysin | lysis | 1 | 30943 | 32358 |
| ASR75947.1 | MF319184_p101 | hypothetical protein | phrog_16036 | unknown function | unknown function | 1 | 55648 | 55893 |
| ASR75926.1 | MF319184_p80 | WhiB family transcription factor | phrog_10071 | transcriptional regulator WhiB-like | transcription regulation | 1 | 49117 | 49749 |
| ASR75986.1 | MF319184_p141 | hypothetical protein | phrog_32672 | unknown function | unknown function | -1 | 77266 | 77523 |
| ASR75903.1 | MF319184_p56 | hypothetical protein | phrog_2596 | unknown function | unknown function | 1 | 39168 | 39545 |
| ASR75921.1 | MF319184_p75 | ssDNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 45899 | 46336 |
| ASR75930.1 | MF319184_p84 | hypothetical protein | phrog_21107 | unknown function | unknown function | 1 | 50724 | 51047 |
| ASR75913.1 | MF319184_p67 | hypothetical protein | phrog_10000 | unknown function | unknown function | 1 | 43419 | 43805 |
| ASR75988.1 | MF319184_p143 | hypothetical protein | phrog_27833 | unknown function | unknown function | -1 | 77955 | 78116 |
| ASR75885.1 | MF319184_p38 | hypothetical protein | phrog_9635 | unknown function | unknown function | 1 | 29598 | 29915 |
| ASR75960.1 | MF319184_p114 | hypothetical protein | phrog_1498 | unknown function | unknown function | 1 | 65233 | 65445 |
| ASR75914.1 | MF319184_p68 | hypothetical protein | phrog_25278 | unknown function | unknown function | 1 | 43805 | 43948 |
| ASR75920.1 | MF319184_p74 | hypothetical protein | phrog_18152 | unknown function | unknown function | 1 | 45484 | 45804 |
| ASR75952.1 | MF319184_p106 | hypothetical protein | singleton | unknown function | unknown function | 1 | 60115 | 60282 |
| ASR75970.1 | MF319184_p124 | integrase | phrog_95 | integrase | integration and excision | -1 | 69096 | 70550 |
| ASR75851.1 | MF319184_p4 | DNA bridging protein | phrog_1223 | nucloid associated Lsr2-like | DNA, RNA and nucleotide metabolism | -1 | 1510 | 1899 |
| ASR75981.1 | MF319184_p136 | hypothetical protein | phrog_15221 | unknown function | unknown function | -1 | 74997 | 75182 |
| ASR75982.1 | MF319184_p137 | hypothetical protein | phrog_16077 | unknown function | unknown function | -1 | 75182 | 75463 |
| ASR75941.1 | MF319184_p95 | hypothetical protein | phrog_12221 | unknown function | unknown function | 1 | 54365 | 54484 |
| ASR75849.1 | MF319184_p2 | hypothetical protein | phrog_3777 | unknown function | unknown function | -1 | 784 | 1206 |
| ASR75974.1 | MF319184_p128 | hypothetical protein | phrog_5931 | unknown function | unknown function | -1 | 71782 | 72720 |
| ASR75893.1 | MF319184_p46 | hypothetical protein | phrog_478 | site-specific recombination directionality factor RDF | integration and excision | -1 | 34402 | 34794 |
| ASR75848.1 | MF319184_p1 | hypothetical protein | phrog_14498 | unknown function | unknown function | -1 | 225 | 524 |
| ASR75943.1 | MF319184_p97 | hypothetical protein | phrog_26770 | unknown function | unknown function | 1 | 54794 | 54976 |
| ASR75879.1 | MF319184_p32 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 22915 | 24696 |
| ASR75919.1 | MF319184_p73 | hypothetical protein | phrog_25776 | unknown function | unknown function | 1 | 45256 | 45483 |
| ASR75962.1 | MF319184_p116 | hypothetical protein | phrog_1843 | unknown function | unknown function | 1 | 65715 | 66428 |
| ASR75891.1 | MF319184_p44 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 33930 | 34181 |
| ASR75856.1 | MF319184_p9 | hypothetical protein | phrog_26114 | unknown function | unknown function | -1 | 2856 | 3005 |
| ASR75864.1 | MF319184_p17 | terminase small subunit | phrog_1496 | terminase small subunit | head and packaging | 1 | 4947 | 5294 |
| ASR75973.1 | MF319184_p127 | hypothetical protein | phrog_733 | excisionase | integration and excision | -1 | 71227 | 71748 |
| ASR75983.1 | MF319184_p138 | hypothetical protein | phrog_31288 | unknown function | unknown function | -1 | 75546 | 75833 |
| ASR75929.1 | MF319184_p83 | hypothetical protein | phrog_4786 | cysteine dioxygenase | other | 1 | 50269 | 50727 |
| ASR75906.1 | MF319184_p59 | hypothetical protein | phrog_24374 | unknown function | unknown function | 1 | 40149 | 40421 |
| ASR75950.1 | MF319184_p104 | hypothetical protein | singleton | unknown function | unknown function | 1 | 57975 | 58103 |
| ASR75987.1 | MF319184_p142 | hypothetical protein | phrog_34673 | unknown function | unknown function | -1 | 77600 | 77872 |
| ASR75936.1 | MF319184_p90 | hypothetical protein | phrog_14780 | unknown function | unknown function | 1 | 53055 | 53297 |
| ASR75971.1 | MF319184_p125 | hypothetical protein | phrog_19465 | unknown function | unknown function | -1 | 70683 | 70976 |
| ASR75979.1 | MF319184_p133 | hypothetical protein | phrog_5733 | unknown function | unknown function | -1 | 74269 | 74544 |
| ASR75966.1 | MF319184_p120 | phosphoesterase | phrog_547 | phosphoesterase | other | 1 | 67316 | 67996 |
| ASR75897.1 | MF319184_p50 | hypothetical protein | phrog_542 | unknown function | unknown function | -1 | 35948 | 36169 |
| ASR75868.1 | MF319184_p21 | scaffolding protein | phrog_3760 | head scaffolding protein | head and packaging | 1 | 9693 | 10367 |
| ASR75874.1 | MF319184_p27 | major tail protein | phrog_476 | major tail protein | tail | 1 | 13394 | 14293 |
| ASR75964.1 | MF319184_p118 | DNA processing chain A | phrog_289 | GTP-binding domain | other | 1 | 66655 | 67140 |
| ASR75927.1 | MF319184_p81 | hypothetical protein | singleton | unknown function | unknown function | 1 | 49727 | 49852 |
| ASR75869.1 | MF319184_p22 | major capsid protein | phrog_283 | major head protein | head and packaging | 1 | 10415 | 11581 |
| ASR75898.1 | MF319184_p51 | hypothetical protein | phrog_16604 | unknown function | unknown function | -1 | 36166 | 36480 |
| ASR75928.1 | MF319184_p82 | hypothetical protein | phrog_16331 | unknown function | unknown function | 1 | 50052 | 50276 |