Genomic map of Mycobacterium phage Lokk (MF324899)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF324899
Definition
Mycobacterium phage Lokk, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
51008
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
89
%GC
63.43
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASW31405.1 MF324899_p60 hypothetical protein phrog_397 unknown function unknown function -1 40058 40288
ASW31360.1 MF324899_p15 portal protein phrog_104 portal protein head and packaging 1 10919 12376
ASW31429.1 MF324899_p84 hypothetical protein phrog_519 unknown function unknown function -1 47974 48141
ASW31367.1 MF324899_p22 head-to-tail connector protein phrog_320 head closure Hc1 connector 1 15621 15989
ASW31427.1 MF324899_p82 hypothetical protein phrog_2355 unknown function unknown function -1 47172 47597
ASW31391.1 MF324899_p46 DNA binding protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 32498 33016
ASW31396.1 MF324899_p51 hypothetical protein phrog_2436 unknown function unknown function -1 36207 36356
ASW31379.1 MF324899_p34 hypothetical protein phrog_2570 unknown function unknown function 1 26231 26431
ASW31373.1 MF324899_p28 tape measure protein phrog_305 tail length tape measure protein tail 1 18268 20796
ASW31357.1 MF324899_p12 holin phrog_526 holin lysis 1 7712 8134
ASW31432.1 MF324899_p87 hypothetical protein phrog_1392 unknown function unknown function -1 48613 49323
ASW31349.1 MF324899_p4 hypothetical protein phrog_4491 unknown function unknown function 1 2223 2543
ASW31363.1 MF324899_p18 major capsid protein phrog_10 major head protein head and packaging 1 13850 14797
ASW31433.1 MF324899_p88 hypothetical protein phrog_1445 unknown function unknown function -1 49351 49455
ASW31417.1 MF324899_p72 hypothetical protein phrog_8490 unknown function unknown function -1 44643 44786
ASW31409.1 MF324899_p64 hypothetical protein phrog_520 unknown function unknown function -1 41511 41753
ASW31384.1 MF324899_p39 hypothetical protein phrog_6992 unknown function unknown function -1 28979 29149
ASW31365.1 MF324899_p20 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 15047 15424
ASW31395.1 MF324899_p50 DNA binding protein phrog_354 sigma-K factor transcription regulation -1 35464 36207
ASW31353.1 MF324899_p8 minor tail protein phrog_819 tail protein tail 1 4396 5382
ASW31351.1 MF324899_p6 minor tail protein phrog_226 minor tail protein tail 1 2873 3343
ASW31431.1 MF324899_p86 hypothetical protein phrog_6255 unknown function unknown function -1 48356 48604
ASW31399.1 MF324899_p54 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 37528 37800
ASW31397.1 MF324899_p52 metallophosphoesterase phrog_221 metallo-phosphoesterase other -1 36360 37130
ASW31383.1 MF324899_p38 hypothetical protein phrog_549 unknown function unknown function 1 28500 28871
ASW31430.1 MF324899_p85 hypothetical protein phrog_1946 unknown function unknown function -1 48138 48344
ASW31350.1 MF324899_p5 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2540 2836
ASW31411.1 MF324899_p66 exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 42052 42867
ASW31381.1 MF324899_p36 dsDNA partitioning protein phrog_164 ParA-like partition protein DNA, RNA and nucleotide metabolism 1 27588 28130
ASW31394.1 MF324899_p49 hypothetical protein phrog_499 unknown function unknown function -1 35285 35467
ASW31354.1 MF324899_p9 hypothetical protein phrog_356 minor tail protein tail 1 5386 6063
ASW31428.1 MF324899_p83 hypothetical protein phrog_586 unknown function unknown function -1 47624 47977
ASW31348.1 MF324899_p3 VIP2-like toxin phrog_3895 ADP-ribosyltransferase exoenzyme toxin moron, auxiliary metabolic gene and host takeover 1 1633 2226
ASW31378.1 MF324899_p33 minor tail protein phrog_737 minor tail protein tail 1 24358 26142
ASW31426.1 MF324899_p81 hypothetical protein phrog_9713 unknown function unknown function -1 47107 47175
ASW31398.1 MF324899_p53 hypothetical protein phrog_474 phosphofructokinase other -1 37127 37531
ASW31401.1 MF324899_p56 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38260 38655
ASW31393.1 MF324899_p48 hypothetical protein phrog_2046 unknown function unknown function -1 35085 35288
ASW31413.1 MF324899_p68 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 43337 43909
ASW31369.1 MF324899_p24 head-to-tail connector protein phrog_123 tail terminator connector 1 16321 16740
ASW31419.1 MF324899_p74 hypothetical protein phrog_23377 unknown function unknown function -1 45067 45306
ASW31414.1 MF324899_p69 hypothetical protein phrog_1173 unknown function unknown function -1 44139 44303
ASW31347.1 MF324899_p2 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 623 1390
ASW31403.1 MF324899_p58 hypothetical protein phrog_2187 unknown function unknown function -1 39097 39228
ASW31370.1 MF324899_p25 major tail protein phrog_117 major tail protein tail 1 16757 17338
ASW31410.1 MF324899_p65 hypothetical protein phrog_642 unknown function unknown function -1 41782 42000
ASW31361.1 MF324899_p16 capsid maturation protease phrog_193 head maturation protease head and packaging 1 12373 13257
ASW31402.1 MF324899_p57 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 38652 39131
ASW31392.1 MF324899_p47 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 33028 35085
ASW31425.1 MF324899_p80 hypothetical protein phrog_3718 unknown function unknown function -1 46880 47110
ASW31389.1 MF324899_p44 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 30128 31915
ASW31352.1 MF324899_p7 minor tail protein phrog_1260 minor tail protein tail 1 3434 4396
ASW31407.1 MF324899_p62 dsDNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 40561 41367
ASW31355.1 MF324899_p10 hypothetical protein phrog_1087 unknown function unknown function 1 6259 6417
ASW31422.1 MF324899_p77 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 45661 45975
ASW31385.1 MF324899_p40 hypothetical protein phrog_4193 unknown function unknown function -1 29146 29286
ASW31386.1 MF324899_p41 hypothetical protein phrog_383 unknown function unknown function -1 29283 29660
ASW31420.1 MF324899_p75 hypothetical protein phrog_3351 unknown function unknown function -1 45303 45530
ASW31380.1 MF324899_p35 DNA binding domain protein phrog_35571 DNA binding protein DNA, RNA and nucleotide metabolism -1 26423 27289
ASW31346.1 MF324899_p1 hypothetical protein phrog_15760 unknown function unknown function 1 306 416
ASW31416.1 MF324899_p71 hypothetical protein phrog_4294 unknown function unknown function -1 44483 44641
ASW31415.1 MF324899_p70 hypothetical protein phrog_7865 unknown function unknown function -1 44307 44483
ASW31423.1 MF324899_p78 hypothetical protein phrog_421 unknown function unknown function -1 45985 46740
ASW31364.1 MF324899_p19 head-to-tail connector protein phrog_748 head-tail connector protein connector 1 14867 15043
ASW31424.1 MF324899_p79 hypothetical protein phrog_855 unknown function unknown function -1 46737 46874
ASW31390.1 MF324899_p45 helix-turn-helix DNA binding protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 31924 32421
ASW31382.1 MF324899_p37 dsDNA partitioning protein phrog_2639 Arc-like repressor transcription regulation 1 28123 28398
ASW31376.1 MF324899_p31 minor tail protein phrog_352 minor tail protein tail 1 23627 24073
ASW31356.1 MF324899_p11 lysin A phrog_317 endolysin lysis 1 6417 7715
ASW31375.1 MF324899_p30 minor tail protein phrog_110 minor tail protein tail 1 21813 23609
ASW31372.1 MF324899_p27 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 17449 17853
ASW31404.1 MF324899_p59 esterease phrog_789 esterase/lipase other -1 39225 40061
ASW31359.1 MF324899_p14 terminase phrog_9 terminase large subunit head and packaging 1 9141 10922
ASW31418.1 MF324899_p73 hypothetical protein phrog_1178 unknown function unknown function -1 44786 45070
ASW31362.1 MF324899_p17 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 13310 13819
ASW31368.1 MF324899_p23 head-to-tail connector protein phrog_321 tail completion or Neck1 protein connector 1 15989 16324
ASW31371.1 MF324899_p26 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 17449 18278
ASW31434.1 MF324899_p89 hypothetical protein phrog_1676 unknown function unknown function -1 49459 49752
ASW31400.1 MF324899_p55 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 37800 38432
ASW31412.1 MF324899_p67 hypothetical protein phrog_1562 unknown function unknown function -1 42864 43280
ASW31374.1 MF324899_p29 minor tail protein phrog_106 minor tail protein tail 1 20830 21840
ASW31406.1 MF324899_p61 hypothetical protein phrog_542 unknown function unknown function -1 40368 40532
ASW31387.1 MF324899_p42 hypothetical protein phrog_3283 unknown function unknown function -1 29661 29879
ASW31408.1 MF324899_p63 hypothetical protein phrog_2731 unknown function unknown function -1 41377 41514
ASW31358.1 MF324899_p13 lysin B phrog_102 endolysin lysis 1 8131 9117
ASW31377.1 MF324899_p32 minor tail protein phrog_404 minor tail protein tail 1 24070 24357
ASW31366.1 MF324899_p21 head-to-tail connector protein phrog_830 head-tail connector protein connector 1 15421 15624
ASW31388.1 MF324899_p43 hypothetical protein phrog_896 unknown function unknown function -1 29876 30097
ASW31421.1 MF324899_p76 hypothetical protein phrog_1477 unknown function unknown function -1 45539 45661