functional categories (each PHROG annotation is associated to a category) | Notes | ||
head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
tail | lysis | other | - Scroll to zoom |
unknown function | - Click on a protein to see its PHROG |
Locus |
MF324911 |
Definition |
Mycobacterium phage SirPhilip, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus. |
DB of origin |
NUCCORE |
Length |
61882 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
97 |
%GC |
66.7 |
Number of singletons |
3 |
Number of paralogs |
0 |
NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
---|---|---|---|---|---|---|---|---|
ASR85220.1 | MF324911_p18 | tail assembly chaperone | phrog_1861 | unknown function | unknown function | 1 | 10000 | 10446 |
ASR85217.1 | MF324911_p14 | head-to-tail connector protein | phrog_387 | neck protein | connector | 1 | 8399 | 8689 |
ASR85296.1 | MF324911_p93 | esterase | phrog_9390 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 58988 | 60181 |
ASR85280.1 | MF324911_p77 | hypothetical protein | phrog_5776 | unknown function | unknown function | 1 | 51837 | 51962 |
ASR85246.1 | MF324911_p43 | membrane protein | phrog_950 | unknown function | unknown function | -1 | 34889 | 35758 |
ASR85269.1 | MF324911_p66 | HNH endonuclease | phrog_1571 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44537 | 44893 |
ASR85245.1 | MF324911_p42 | hypothetical protein | phrog_8155 | unknown function | unknown function | 1 | 34541 | 34792 |
ASR85277.1 | MF324911_p74 | hypothetical protein | phrog_1338 | unknown function | unknown function | 1 | 50824 | 51099 |
ASR85242.1 | MF324911_p39 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30887 | 32281 |
ASR85286.1 | MF324911_p83 | hypothetical protein | phrog_666 | unknown function | unknown function | 1 | 53843 | 54031 |
ASR85273.1 | MF324911_p70 | hypothetical protein | phrog_3478 | unknown function | unknown function | 1 | 48661 | 49104 |
ASR85279.1 | MF324911_p76 | hypothetical protein | phrog_12426 | unknown function | unknown function | 1 | 51516 | 51746 |
ASR85281.1 | MF324911_p78 | helix-turn-helix DNA binding domain protein | phrog_2342 | unknown function | unknown function | 1 | 51959 | 52807 |
ASR85248.1 | MF324911_p45 | CRO protein | phrog_1702 | transcriptional repressor | transcription regulation | 1 | 36474 | 36710 |
ASR85290.1 | MF324911_p87 | hypothetical protein | phrog_2493 | unknown function | unknown function | 1 | 56270 | 56818 |
ASR85218.1 | MF324911_p15 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 8686 | 9105 |
ASR85293.1 | MF324911_p90 | hypothetical protein | phrog_7638 | unknown function | unknown function | 1 | 57845 | 58204 |
ASR85264.1 | MF324911_p61 | hypothetical protein | phrog_3492 | unknown function | unknown function | 1 | 42726 | 43067 |
ASR85205.1 | MF324911_p2 | hypothetical protein | singleton | unknown function | unknown function | 1 | 244 | 471 |
ASR85262.1 | MF324911_p59 | hypothetical protein | phrog_2870 | unknown function | unknown function | 1 | 41537 | 41830 |
ASR85238.1 | MF324911_p35 | helix-turn-helix DNA binding domain protein | phrog_2311 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 28708 | 29124 |
ASR85234.1 | MF324911_p31 | hypothetical protein | phrog_3413 | unknown function | unknown function | 1 | 26577 | 26924 |
ASR85247.1 | MF324911_p44 | immunity repressor | phrog_1746 | transcriptional repressor | transcription regulation | -1 | 35824 | 36219 |
ASR85216.1 | MF324911_p13 | head-to-tail connector protein | phrog_763 | head-tail adaptor | connector | 1 | 8065 | 8418 |
ASR85215.1 | MF324911_p12 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 7688 | 8065 |
ASR85236.1 | MF324911_p33 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 27159 | 28289 |
ASR85222.1 | MF324911_p19 | tape measure protein | phrog_971 | endolysin | lysis | 1 | 10854 | 14759 |
ASR85208.1 | MF324911_p5 | terminase small subunit | phrog_1459 | terminase small subunit | head and packaging | 1 | 1153 | 1398 |
ASR85251.1 | MF324911_p48 | hypothetical protein | phrog_6733 | unknown function | unknown function | 1 | 37339 | 37575 |
ASR85209.1 | MF324911_p6 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 1382 | 2806 |
ASR85219.1 | MF324911_p16 | major tail protein | phrog_117 | major tail protein | tail | 1 | 9268 | 9879 |
ASR85272.1 | MF324911_p69 | resolvase | phrog_3055 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 47940 | 48668 |
ASR85261.1 | MF324911_p58 | hypothetical protein | phrog_2596 | unknown function | unknown function | 1 | 41271 | 41540 |
ASR85291.1 | MF324911_p88 | hypothetical protein | phrog_3665 | unknown function | unknown function | 1 | 56815 | 56958 |
ASR85233.1 | MF324911_p30 | holin | phrog_565 | holin | lysis | 1 | 26116 | 26580 |
ASR85235.1 | MF324911_p32 | hypothetical protein | phrog_1738 | unknown function | unknown function | 1 | 26921 | 27172 |
ASR85228.1 | MF324911_p25 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 19755 | 22217 |
ASR85284.1 | MF324911_p81 | hypothetical protein | phrog_5288 | unknown function | unknown function | 1 | 53492 | 53758 |
ASR85267.1 | MF324911_p64 | hypothetical protein | phrog_1911 | unknown function | unknown function | 1 | 43696 | 44205 |
ASR85298.1 | MF324911_p95 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 60954 | 61283 |
ASR85271.1 | MF324911_p68 | hypothetical protein | phrog_7662 | unknown function | unknown function | 1 | 47533 | 47838 |
ASR85294.1 | MF324911_p91 | HicB-like antitoxin | phrog_5243 | unknown function | unknown function | 1 | 58301 | 58495 |
ASR85232.1 | MF324911_p29 | lysin B | phrog_102 | endolysin | lysis | 1 | 25363 | 26103 |
ASR85278.1 | MF324911_p75 | hypothetical protein | phrog_5546 | unknown function | unknown function | 1 | 51179 | 51391 |
ASR85249.1 | MF324911_p46 | excise | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 36707 | 36919 |
ASR85287.1 | MF324911_p84 | RNA ligase | phrog_1075 | tRNA splicing ligase | DNA, RNA and nucleotide metabolism | 1 | 54168 | 55349 |
ASR85259.1 | MF324911_p56 | hypothetical protein | phrog_1956 | unknown function | unknown function | 1 | 40407 | 40697 |
ASR85256.1 | MF324911_p53 | hypothetical protein | phrog_2781 | unknown function | unknown function | 1 | 38933 | 39697 |
ASR85211.1 | MF324911_p8 | capsid maturation protease | phrog_1752 | head maturation protease | head and packaging | 1 | 4316 | 5803 |
ASR85226.1 | MF324911_p23 | minor tail protein | phrog_1565 | minor tail protein | tail | 1 | 18337 | 19440 |
ASR85260.1 | MF324911_p57 | DNA polymerase III subunit | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 40708 | 41271 |
ASR85292.1 | MF324911_p89 | protease | phrog_1006 | unknown function | unknown function | 1 | 57157 | 57723 |
ASR85240.1 | MF324911_p37 | hypothetical protein | phrog_29826 | unknown function | unknown function | 1 | 29401 | 29667 |
ASR85213.1 | MF324911_p10 | scaffolding protein | phrog_1793 | head scaffolding protein | head and packaging | 1 | 6046 | 6564 |
ASR85282.1 | MF324911_p79 | hypothetical protein | phrog_3868 | unknown function | unknown function | 1 | 52804 | 53241 |
ASR85300.1 | MF324911_p97 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 61540 | 61833 |
ASR85252.1 | MF324911_p49 | hypothetical protein | phrog_2654 | unknown function | unknown function | 1 | 37572 | 37733 |
ASR85244.1 | MF324911_p41 | integrase | phrog_1 | integrase | integration and excision | 1 | 33094 | 34491 |
ASR85231.1 | MF324911_p28 | lysin A | phrog_317 | endolysin | lysis | 1 | 23735 | 25366 |
ASR85237.1 | MF324911_p34 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 28286 | 28516 |
ASR85297.1 | MF324911_p94 | hypothetical protein | phrog_24868 | unknown function | unknown function | 1 | 60333 | 60710 |
ASR85206.1 | MF324911_p3 | hypothetical protein | phrog_2074 | unknown function | unknown function | 1 | 468 | 731 |
ASR85227.1 | MF324911_p24 | minor tail protein | phrog_1736 | minor tail protein | tail | 1 | 19446 | 19754 |
ASR85221.1 | MF324911_p17 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 10000 | 10844 |
ASR85258.1 | MF324911_p55 | hypothetical protein | phrog_3186 | unknown function | unknown function | 1 | 40093 | 40404 |
ASR85230.1 | MF324911_p27 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 23328 | 23702 |
ASR85257.1 | MF324911_p54 | hypothetical protein | phrog_478 | site-specific recombination directionality factor RDF | integration and excision | 1 | 39707 | 40096 |
ASR85229.1 | MF324911_p26 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 22229 | 23257 |
ASR85254.1 | MF324911_p51 | helix-turn-helix DNA binding domain protein | phrog_2286 | unknown function | unknown function | 1 | 37984 | 38682 |
ASR85270.1 | MF324911_p67 | DNA primase/polymerase | phrog_2478 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 44936 | 47533 |
ASR85275.1 | MF324911_p72 | hypothetical protein | phrog_549 | unknown function | unknown function | 1 | 50211 | 50594 |
ASR85285.1 | MF324911_p82 | hypothetical protein | singleton | unknown function | unknown function | 1 | 53755 | 53829 |
ASR85250.1 | MF324911_p47 | hypothetical protein | phrog_2908 | unknown function | unknown function | 1 | 36922 | 37266 |
ASR85212.1 | MF324911_p9 | hypothetical protein | phrog_1757 | unknown function | unknown function | 1 | 5800 | 5982 |
ASR85268.1 | MF324911_p65 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 44298 | 44537 |
ASR85289.1 | MF324911_p86 | hypothetical protein | phrog_2822 | unknown function | unknown function | 1 | 55717 | 56277 |
ASR85210.1 | MF324911_p7 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2803 | 4356 |
ASR85299.1 | MF324911_p96 | hypothetical protein | phrog_4561 | unknown function | unknown function | 1 | 61295 | 61543 |
ASR85241.1 | MF324911_p38 | hypothetical protein | phrog_2433 | unknown function | unknown function | 1 | 29794 | 30471 |
ASR85225.1 | MF324911_p22 | minor tail protein | phrog_1697 | minor tail protein | tail | 1 | 17768 | 18241 |
ASR85224.1 | MF324911_p21 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 16001 | 17767 |
ASR85276.1 | MF324911_p73 | hypothetical protein | phrog_4269 | unknown function | unknown function | 1 | 50594 | 50827 |
ASR85214.1 | MF324911_p11 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 6640 | 7569 |
ASR85274.1 | MF324911_p71 | helix-turn-helix DNA binding domain protein | phrog_908 | unknown function | unknown function | 1 | 49101 | 50201 |
ASR85266.1 | MF324911_p63 | hypothetical protein | phrog_2388 | unknown function | unknown function | 1 | 43484 | 43609 |
ASR85295.1 | MF324911_p92 | HicA-like toxin | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 58618 | 58833 |
ASR85253.1 | MF324911_p50 | hypothetical protein | phrog_3903 | unknown function | unknown function | 1 | 37730 | 37987 |
ASR85207.1 | MF324911_p4 | hypothetical protein | phrog_2622 | unknown function | unknown function | 1 | 960 | 1160 |
ASR85204.1 | MF324911_p1 | hypothetical protein | phrog_4624 | unknown function | unknown function | 1 | 56 | 247 |
ASR85283.1 | MF324911_p80 | helix-turn-helix DNA binding domain protein | phrog_5794 | unknown function | unknown function | 1 | 53235 | 53495 |
ASR85265.1 | MF324911_p62 | hypothetical protein | phrog_8427 | unknown function | unknown function | 1 | 43069 | 43278 |
ASR85239.1 | MF324911_p36 | hypothetical protein | phrog_4112 | unknown function | unknown function | 1 | 29126 | 29404 |
ASR85223.1 | MF324911_p20 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 14868 | 16001 |
ASR85255.1 | MF324911_p52 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 38679 | 38936 |
ASR85243.1 | MF324911_p40 | hypothetical protein | phrog_12017 | unknown function | unknown function | -1 | 32580 | 32747 |
ASR85263.1 | MF324911_p60 | exonuclease | phrog_1674 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 41827 | 42729 |
ASR85288.1 | MF324911_p85 | hypothetical protein | phrog_3167 | unknown function | unknown function | 1 | 55346 | 55717 |