| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF324912 |
Definition |
Mycobacterium phage Phrank, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus. |
DB of origin |
NUCCORE |
Length |
61109 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
101 |
%GC |
66.24 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASR85373.1 | MF324912_p73 | resolvase | phrog_3055 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 47262 | 47975 |
| ASR85346.1 | MF324912_p46 | excise | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 35327 | 35539 |
| ASR85382.1 | MF324912_p82 | helix-turn-helix DNA binding domain protein | phrog_2342 | unknown function | unknown function | 1 | 51947 | 52792 |
| ASR85304.1 | MF324912_p4 | hypothetical protein | phrog_2622 | unknown function | unknown function | 1 | 1089 | 1283 |
| ASR85327.1 | MF324912_p27 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 22670 | 23731 |
| ASR85331.1 | MF324912_p31 | holin | phrog_565 | holin | lysis | 1 | 26603 | 27067 |
| ASR85354.1 | MF324912_p54 | hypothetical protein | phrog_542 | unknown function | unknown function | 1 | 38309 | 38482 |
| ASR85385.1 | MF324912_p85 | hypothetical protein | phrog_5135 | unknown function | unknown function | 1 | 53294 | 53656 |
| ASR85361.1 | MF324912_p61 | exonuclease | phrog_1674 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 40732 | 41631 |
| ASR85352.1 | MF324912_p52 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 37132 | 37389 |
| ASR85322.1 | MF324912_p22 | minor tail protein | phrog_1697 | minor tail protein | tail | 1 | 18092 | 18565 |
| ASR85397.1 | MF324912_p97 | hypothetical protein | phrog_18965 | unknown function | unknown function | 1 | 58920 | 59120 |
| ASR85310.1 | MF324912_p10 | scaffolding protein | phrog_1793 | head scaffolding protein | head and packaging | 1 | 6234 | 6800 |
| ASR85392.1 | MF324912_p92 | hypothetical protein | phrog_2822 | unknown function | unknown function | 1 | 56586 | 57317 |
| ASR85321.1 | MF324912_p21 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 16326 | 18092 |
| ASR85359.1 | MF324912_p59 | hypothetical protein | phrog_2870 | unknown function | unknown function | 1 | 40017 | 40343 |
| ASR85302.1 | MF324912_p2 | hypothetical protein | phrog_2074 | unknown function | unknown function | 1 | 394 | 654 |
| ASR85384.1 | MF324912_p84 | hypothetical protein | phrog_5035 | unknown function | unknown function | 1 | 53043 | 53297 |
| ASR85340.1 | MF324912_p40 | hypothetical protein | phrog_9364 | unknown function | unknown function | 1 | 31155 | 31331 |
| ASR85362.1 | MF324912_p62 | hypothetical protein | phrog_3492 | unknown function | unknown function | 1 | 41628 | 41969 |
| ASR85351.1 | MF324912_p51 | helix-turn-helix DNA binding domain protein | phrog_2286 | unknown function | unknown function | 1 | 36440 | 37135 |
| ASR85369.1 | MF324912_p69 | HNH endonuclease | phrog_1571 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 43693 | 44067 |
| ASR85320.1 | MF324912_p20 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 15187 | 16326 |
| ASR85390.1 | MF324912_p90 | RNA ligase | phrog_1075 | tRNA splicing ligase | DNA, RNA and nucleotide metabolism | 1 | 55015 | 56220 |
| ASR85357.1 | MF324912_p57 | hypothetical protein | phrog_1956 | unknown function | unknown function | 1 | 39154 | 39444 |
| ASR85307.1 | MF324912_p7 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2954 | 4504 |
| ASR85317.1 | MF324912_p18 | tail assembly chaperone | phrog_1861 | unknown function | unknown function | 1 | 10230 | 10652 |
| ASR85368.1 | MF324912_p68 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 43454 | 43693 |
| ASR85315.1 | MF324912_p15 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 8909 | 9346 |
| ASR85379.1 | MF324912_p79 | hypothetical protein | phrog_5546 | unknown function | unknown function | 1 | 50643 | 50855 |
| ASR85365.1 | MF324912_p65 | hypothetical protein | phrog_1581 | unknown function | unknown function | 1 | 42401 | 42613 |
| ASR85378.1 | MF324912_p78 | hypothetical protein | phrog_7658 | unknown function | unknown function | 1 | 50314 | 50580 |
| ASR85313.1 | MF324912_p13 | head-to-tail connector protein | phrog_763 | head-tail adaptor | connector | 1 | 8291 | 8644 |
| ASR85353.1 | MF324912_p53 | hypothetical protein | phrog_2781 | unknown function | unknown function | 1 | 37386 | 38312 |
| ASR85336.1 | MF324912_p36 | hypothetical protein | phrog_33470 | unknown function | unknown function | 1 | 29147 | 29233 |
| ASR85358.1 | MF324912_p58 | DNA polymerase III subunit | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 39457 | 40020 |
| ASR85343.1 | MF324912_p43 | membrane protein | phrog_950 | unknown function | unknown function | -1 | 33518 | 34384 |
| ASR85376.1 | MF324912_p76 | hypothetical protein | phrog_4269 | unknown function | unknown function | 1 | 49689 | 49922 |
| ASR85311.1 | MF324912_p11 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 6869 | 7792 |
| ASR85394.1 | MF324912_p94 | hypothetical protein | phrog_3665 | unknown function | unknown function | 1 | 57882 | 58046 |
| ASR85324.1 | MF324912_p24 | minor tail protein | phrog_1736 | minor tail protein | tail | 1 | 19734 | 20045 |
| ASR85366.1 | MF324912_p66 | hypothetical protein | phrog_2388 | unknown function | unknown function | 1 | 42613 | 42738 |
| ASR85386.1 | MF324912_p86 | helix-turn-helix DNA binding domain protein | phrog_5794 | unknown function | unknown function | 1 | 53653 | 53916 |
| ASR85364.1 | MF324912_p64 | hypothetical protein | phrog_5466 | unknown function | unknown function | 1 | 42174 | 42404 |
| ASR85389.1 | MF324912_p89 | hypothetical protein | phrog_30629 | unknown function | unknown function | 1 | 54561 | 54908 |
| ASR85396.1 | MF324912_p96 | hypothetical protein | phrog_4631 | unknown function | unknown function | 1 | 58618 | 58923 |
| ASR85355.1 | MF324912_p55 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 38516 | 38863 |
| ASR85335.1 | MF324912_p35 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 28866 | 29099 |
| ASR85318.1 | MF324912_p17 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 10230 | 11071 |
| ASR85312.1 | MF324912_p12 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 7911 | 8291 |
| ASR85326.1 | MF324912_p26 | minor tail protein | phrog_3901 | unknown function | unknown function | 1 | 22383 | 22670 |
| ASR85375.1 | MF324912_p75 | helix-turn-helix DNA binding domain protein | phrog_908 | unknown function | unknown function | 1 | 48576 | 49679 |
| ASR85306.1 | MF324912_p6 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 1515 | 2942 |
| ASR85395.1 | MF324912_p95 | hypothetical protein | phrog_20958 | unknown function | unknown function | 1 | 58328 | 58504 |
| ASR85348.1 | MF324912_p48 | hypothetical protein | phrog_6733 | unknown function | unknown function | 1 | 35909 | 36151 |
| ASR85370.1 | MF324912_p70 | hypothetical protein | phrog_24356 | unknown function | unknown function | 1 | 44064 | 44228 |
| ASR85371.1 | MF324912_p71 | DNA primase/polymerase | phrog_2478 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 44267 | 46858 |
| ASR85305.1 | MF324912_p5 | terminase small subunit | phrog_1459 | terminase small subunit | head and packaging | 1 | 1283 | 1531 |
| ASR85330.1 | MF324912_p30 | lysin B | phrog_102 | endolysin | lysis | 1 | 25840 | 26583 |
| ASR85383.1 | MF324912_p83 | hypothetical protein | phrog_7731 | unknown function | unknown function | 1 | 52789 | 53046 |
| ASR85323.1 | MF324912_p23 | minor tail protein | phrog_1565 | minor tail protein | tail | 1 | 18625 | 19728 |
| ASR85314.1 | MF324912_p14 | head-to-tail connector protein | phrog_387 | neck protein | connector | 1 | 8625 | 8912 |
| ASR85308.1 | MF324912_p8 | capsid maturation protease | phrog_1752 | head maturation protease | head and packaging | 1 | 4464 | 5945 |
| ASR85337.1 | MF324912_p37 | helix-turn-helix DNA binding domain protein | phrog_2311 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 29429 | 29866 |
| ASR85301.1 | MF324912_p1 | hypothetical protein | phrog_4624 | unknown function | unknown function | 1 | 114 | 329 |
| ASR85388.1 | MF324912_p88 | hypothetical protein | phrog_666 | unknown function | unknown function | 1 | 54330 | 54539 |
| ASR85334.1 | MF324912_p34 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 27661 | 28869 |
| ASR85360.1 | MF324912_p60 | hypothetical protein | phrog_2831 | unknown function | unknown function | 1 | 40340 | 40735 |
| ASR85342.1 | MF324912_p42 | hypothetical protein | phrog_8155 | unknown function | unknown function | 1 | 33167 | 33448 |
| ASR85349.1 | MF324912_p49 | hypothetical protein | phrog_2654 | unknown function | unknown function | 1 | 36148 | 36315 |
| ASR85387.1 | MF324912_p87 | hypothetical protein | phrog_5288 | unknown function | unknown function | 1 | 53913 | 54179 |
| ASR85339.1 | MF324912_p39 | hypothetical protein | phrog_2433 | unknown function | unknown function | 1 | 30386 | 31072 |
| ASR85345.1 | MF324912_p45 | CRO protein | phrog_1702 | transcriptional repressor | transcription regulation | 1 | 35094 | 35330 |
| ASR85367.1 | MF324912_p67 | hypothetical protein | phrog_1911 | unknown function | unknown function | 1 | 42821 | 43339 |
| ASR85341.1 | MF324912_p41 | integrase | phrog_1 | integrase | integration and excision | 1 | 31779 | 33158 |
| ASR85347.1 | MF324912_p47 | hypothetical protein | phrog_2908 | unknown function | unknown function | 1 | 35543 | 35836 |
| ASR85333.1 | MF324912_p33 | hypothetical protein | phrog_1738 | unknown function | unknown function | 1 | 27423 | 27674 |
| ASR85391.1 | MF324912_p91 | hypothetical protein | phrog_3167 | unknown function | unknown function | 1 | 56224 | 56586 |
| ASR85399.1 | MF324912_p99 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 60141 | 60476 |
| ASR85319.1 | MF324912_p19 | tape measure protein | phrog_971 | endolysin | lysis | 1 | 11071 | 15072 |
| ASR85381.1 | MF324912_p81 | hypothetical protein | phrog_12426 | unknown function | unknown function | 1 | 51627 | 51857 |
| ASR85316.1 | MF324912_p16 | major tail protein | phrog_117 | major tail protein | tail | 1 | 9499 | 10113 |
| ASR85328.1 | MF324912_p28 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 23825 | 24181 |
| ASR85332.1 | MF324912_p32 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 27064 | 27426 |
| ASR85393.1 | MF324912_p93 | hypothetical protein | phrog_2493 | unknown function | unknown function | 1 | 57307 | 57885 |
| ASR85329.1 | MF324912_p29 | lysin A | phrog_317 | endolysin | lysis | 1 | 24197 | 25843 |
| ASR85325.1 | MF324912_p25 | minor tail protein | phrog_746 | minor tail protein | tail | 1 | 20046 | 22382 |
| ASR85338.1 | MF324912_p38 | hypothetical protein | phrog_4112 | unknown function | unknown function | 1 | 29863 | 30243 |
| ASR85303.1 | MF324912_p3 | hypothetical protein | phrog_2293 | unknown function | unknown function | 1 | 664 | 888 |
| ASR85380.1 | MF324912_p80 | protease | phrog_1006 | unknown function | unknown function | 1 | 50939 | 51511 |
| ASR85344.1 | MF324912_p44 | immunity repressor | phrog_1746 | transcriptional repressor | transcription regulation | -1 | 34442 | 34834 |
| ASR85309.1 | MF324912_p9 | hypothetical protein | phrog_1757 | unknown function | unknown function | 1 | 5942 | 6127 |
| ASR85400.1 | MF324912_p100 | hypothetical protein | phrog_4561 | unknown function | unknown function | 1 | 60490 | 60756 |
| ASR85356.1 | MF324912_p56 | hypothetical protein | phrog_3186 | unknown function | unknown function | 1 | 38856 | 39161 |
| ASR85401.1 | MF324912_p101 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 60753 | 61058 |
| ASR85377.1 | MF324912_p77 | hypothetical protein | phrog_1338 | unknown function | unknown function | 1 | 49919 | 50191 |
| ASR85363.1 | MF324912_p63 | hypothetical protein | phrog_8427 | unknown function | unknown function | 1 | 41971 | 42162 |
| ASR85398.1 | MF324912_p98 | hypothetical protein | phrog_16962 | unknown function | unknown function | 1 | 59324 | 59743 |
| ASR85350.1 | MF324912_p50 | hypothetical protein | phrog_17160 | unknown function | unknown function | 1 | 36312 | 36443 |
| ASR85372.1 | MF324912_p72 | hypothetical protein | phrog_7662 | unknown function | unknown function | 1 | 46855 | 47205 |
| ASR85374.1 | MF324912_p74 | hypothetical protein | phrog_3478 | unknown function | unknown function | 1 | 47968 | 48579 |