Genomic map of Mycobacterium phage Cain (MF324913)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF324913
Definition
Mycobacterium phage Cain, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
DB of origin
NUCCORE
Length
60813
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
100
%GC
66.27
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASR85437.1 MF324913_p36 hypothetical protein phrog_33470 unknown function unknown function 1 29158 29244
ASR85466.1 MF324913_p65 hypothetical protein phrog_1581 unknown function unknown function 1 42411 42623
ASR85434.1 MF324913_p33 hypothetical protein phrog_1738 unknown function unknown function 1 27435 27686
ASR85406.1 MF324913_p5 terminase small subunit phrog_1459 terminase small subunit head and packaging 1 1277 1525
ASR85467.1 MF324913_p66 hypothetical protein phrog_2388 unknown function unknown function 1 42623 42748
ASR85500.1 MF324913_p99 hypothetical protein phrog_4561 unknown function unknown function 1 60192 60458
ASR85404.1 MF324913_p3 hypothetical protein phrog_2293 unknown function unknown function 1 658 882
ASR85452.1 MF324913_p51 helix-turn-helix DNA binding domain protein phrog_2286 unknown function unknown function 1 36450 37145
ASR85424.1 MF324913_p23 minor tail protein phrog_1565 minor tail protein tail 1 18637 19740
ASR85464.1 MF324913_p63 hypothetical protein phrog_8427 unknown function unknown function 1 41981 42172
ASR85444.1 MF324913_p43 membrane protein phrog_950 unknown function unknown function -1 33527 34393
ASR85447.1 MF324913_p46 excise phrog_66 excisionase and transcriptional regulator integration and excision 1 35337 35549
ASR85432.1 MF324913_p31 holin phrog_565 holin lysis 1 26615 27079
ASR85413.1 MF324913_p12 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 7923 8303
ASR85458.1 MF324913_p57 hypothetical protein phrog_1956 unknown function unknown function 1 39164 39454
ASR85402.1 MF324913_p1 hypothetical protein phrog_4624 unknown function unknown function 1 114 323
ASR85407.1 MF324913_p6 terminase large subunit phrog_2 terminase large subunit head and packaging 1 1509 2936
ASR85482.1 MF324913_p81 hypothetical protein phrog_12426 unknown function unknown function 1 51640 51870
ASR85476.1 MF324913_p75 helix-turn-helix DNA binding domain protein phrog_908 unknown function unknown function 1 48589 49692
ASR85442.1 MF324913_p41 integrase phrog_1 integrase integration and excision 1 31790 33169
ASR85440.1 MF324913_p39 hypothetical protein phrog_2433 unknown function unknown function 1 30397 31083
ASR85472.1 MF324913_p71 DNA primase/polymerase phrog_2478 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 44277 46868
ASR85415.1 MF324913_p14 head-to-tail connector protein phrog_387 neck protein connector 1 8637 8924
ASR85420.1 MF324913_p19 tape measure protein phrog_971 endolysin lysis 1 11083 15084
ASR85426.1 MF324913_p25 minor tail protein phrog_746 minor tail protein tail 1 20058 22394
ASR85443.1 MF324913_p42 hypothetical protein phrog_8155 unknown function unknown function 1 33178 33459
ASR85468.1 MF324913_p67 hypothetical protein phrog_1911 unknown function unknown function 1 42831 43349
ASR85419.1 MF324913_p17 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 10242 11083
ASR85488.1 MF324913_p87 hypothetical protein phrog_5288 unknown function unknown function 1 53926 54192
ASR85494.1 MF324913_p93 hypothetical protein phrog_2493 unknown function unknown function 1 57320 57898
ASR85486.1 MF324913_p85 hypothetical protein phrog_5135 unknown function unknown function 1 53307 53669
ASR85473.1 MF324913_p72 hypothetical protein phrog_7662 unknown function unknown function 1 46865 47218
ASR85456.1 MF324913_p55 hypothetical protein phrog_301 secreted protein other 1 38526 38873
ASR85489.1 MF324913_p88 hypothetical protein phrog_666 unknown function unknown function 1 54343 54552
ASR85471.1 MF324913_p70 hypothetical protein phrog_24356 unknown function unknown function 1 44074 44238
ASR85477.1 MF324913_p76 hypothetical protein phrog_4269 unknown function unknown function 1 49702 49935
ASR85403.1 MF324913_p2 hypothetical protein phrog_2074 unknown function unknown function 1 388 648
ASR85481.1 MF324913_p80 protease phrog_1006 unknown function unknown function 1 50952 51524
ASR85445.1 MF324913_p44 immunity repressor phrog_1746 transcriptional repressor transcription regulation -1 34451 34864
ASR85412.1 MF324913_p11 major capsid protein phrog_10 major head protein head and packaging 1 6881 7804
ASR85463.1 MF324913_p62 hypothetical protein phrog_3492 unknown function unknown function 1 41638 41979
ASR85483.1 MF324913_p82 helix-turn-helix DNA binding domain protein phrog_2342 unknown function unknown function 1 51960 52805
ASR85410.1 MF324913_p9 hypothetical protein phrog_1757 unknown function unknown function 1 5942 6127
ASR85462.1 MF324913_p61 exonuclease phrog_1674 exonuclease DNA, RNA and nucleotide metabolism 1 40742 41641
ASR85446.1 MF324913_p45 CRO protein phrog_1702 transcriptional repressor transcription regulation 1 35104 35340
ASR85491.1 MF324913_p90 RNA ligase phrog_1075 tRNA splicing ligase DNA, RNA and nucleotide metabolism 1 55028 56233
ASR85459.1 MF324913_p58 DNA polymerase III subunit phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 39467 40030
ASR85454.1 MF324913_p53 hypothetical protein phrog_2781 unknown function unknown function 1 37396 38322
ASR85409.1 MF324913_p8 capsid maturation protease phrog_1752 head maturation protease head and packaging 1 4458 5945
ASR85416.1 MF324913_p15 head-to-tail connector protein phrog_123 tail terminator connector 1 8921 9358
ASR85479.1 MF324913_p78 hypothetical protein phrog_7658 unknown function unknown function 1 50327 50593
ASR85430.1 MF324913_p29 lysin A phrog_317 endolysin lysis 1 24209 25855
ASR85469.1 MF324913_p68 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 43464 43703
ASR85405.1 MF324913_p4 hypothetical protein phrog_2622 unknown function unknown function 1 1083 1277
ASR85465.1 MF324913_p64 hypothetical protein phrog_5466 unknown function unknown function 1 42184 42414
ASR85429.1 MF324913_p28 hypothetical protein phrog_240 head protein head and packaging 1 23837 24193
ASR85436.1 MF324913_p35 hypothetical protein phrog_1042 unknown function unknown function 1 28878 29111
ASR85439.1 MF324913_p38 hypothetical protein phrog_4112 unknown function unknown function 1 29874 30254
ASR85490.1 MF324913_p89 hypothetical protein phrog_30629 unknown function unknown function 1 54574 54921
ASR85408.1 MF324913_p7 portal protein phrog_104 portal protein head and packaging 1 2948 4498
ASR85485.1 MF324913_p84 hypothetical protein phrog_5035 unknown function unknown function 1 53056 53310
ASR85474.1 MF324913_p73 resolvase phrog_3055 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 47275 47988
ASR85425.1 MF324913_p24 minor tail protein phrog_1736 minor tail protein tail 1 19746 20057
ASR85461.1 MF324913_p60 hypothetical protein phrog_2831 unknown function unknown function 1 40350 40745
ASR85411.1 MF324913_p10 scaffolding protein phrog_1793 head scaffolding protein head and packaging 1 6234 6812
ASR85438.1 MF324913_p37 helix-turn-helix DNA binding domain protein phrog_2311 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 29440 29877
ASR85423.1 MF324913_p22 minor tail protein phrog_1697 minor tail protein tail 1 18104 18577
ASR85428.1 MF324913_p27 minor tail protein phrog_416 minor tail protein tail 1 22682 23743
ASR85414.1 MF324913_p13 head-to-tail connector protein phrog_763 head-tail adaptor connector 1 8303 8656
ASR85441.1 MF324913_p40 hypothetical protein phrog_9364 unknown function unknown function 1 31166 31342
ASR85450.1 MF324913_p49 hypothetical protein phrog_2654 unknown function unknown function 1 36158 36325
ASR85431.1 MF324913_p30 lysin B phrog_102 endolysin lysis 1 25852 26595
ASR85497.1 MF324913_p96 hypothetical protein phrog_4631 unknown function unknown function 1 58640 58945
ASR85417.1 MF324913_p16 major tail protein phrog_117 major tail protein tail 1 9511 10125
ASR85421.1 MF324913_p20 minor tail protein phrog_106 minor tail protein tail 1 15199 16338
ASR85484.1 MF324913_p83 hypothetical protein phrog_7731 unknown function unknown function 1 52802 53059
ASR85501.1 MF324913_p100 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 60455 60763
ASR85498.1 MF324913_p97 hypothetical protein phrog_28021 unknown function unknown function 1 59150 59440
ASR85487.1 MF324913_p86 helix-turn-helix DNA binding domain protein phrog_5794 unknown function unknown function 1 53666 53929
ASR85499.1 MF324913_p98 hypothetical protein phrog_747 unknown function unknown function 1 59843 60178
ASR85495.1 MF324913_p94 hypothetical protein phrog_3665 unknown function unknown function 1 57895 58065
ASR85460.1 MF324913_p59 hypothetical protein phrog_2870 unknown function unknown function 1 40027 40353
ASR85427.1 MF324913_p26 minor tail protein phrog_3901 unknown function unknown function 1 22395 22682
ASR85448.1 MF324913_p47 hypothetical protein phrog_2908 unknown function unknown function 1 35553 35846
ASR85451.1 MF324913_p50 hypothetical protein phrog_17160 unknown function unknown function 1 36322 36453
ASR85496.1 MF324913_p95 hypothetical protein phrog_20318 unknown function unknown function 1 58347 58529
ASR85453.1 MF324913_p52 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 37142 37399
ASR85422.1 MF324913_p21 minor tail protein phrog_110 minor tail protein tail 1 16338 18104
ASR85475.1 MF324913_p74 hypothetical protein phrog_3478 unknown function unknown function 1 47981 48592
ASR85433.1 MF324913_p32 hypothetical protein phrog_404 minor tail protein tail 1 27076 27438
ASR85455.1 MF324913_p54 hypothetical protein phrog_542 unknown function unknown function 1 38319 38492
ASR85478.1 MF324913_p77 hypothetical protein phrog_1338 unknown function unknown function 1 49932 50204
ASR85435.1 MF324913_p34 hypothetical protein phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 27673 28881
ASR85470.1 MF324913_p69 HNH endonuclease phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 43703 44077
ASR85492.1 MF324913_p91 hypothetical protein phrog_3167 unknown function unknown function 1 56237 56599
ASR85480.1 MF324913_p79 hypothetical protein phrog_5546 unknown function unknown function 1 50656 50868
ASR85418.1 MF324913_p18 tail assembly chaperone phrog_1861 unknown function unknown function 1 10242 10664
ASR85493.1 MF324913_p92 hypothetical protein phrog_2822 unknown function unknown function 1 56599 57330
ASR85449.1 MF324913_p48 hypothetical protein phrog_6733 unknown function unknown function 1 35919 36161
ASR85457.1 MF324913_p56 hypothetical protein phrog_3186 unknown function unknown function 1 38866 39171