Genomic map of Mycobacterium phage Amgine (MF324915)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF324915
Definition
Mycobacterium phage Amgine, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
DB of origin
NUCCORE
Length
62236
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
97
%GC
66.44
Number of singletons
6
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASR85688.1 MF324915_p88 hypothetical protein phrog_16857 unknown function unknown function 1 57933 58067
ASR85653.1 MF324915_p52 hypothetical protein phrog_2781 unknown function unknown function 1 38804 39586
ASR85659.1 MF324915_p58 hypothetical protein phrog_2870 unknown function unknown function 1 41663 41959
ASR85689.1 MF324915_p89 hypothetical protein phrog_2074 unknown function unknown function 1 58064 58318
ASR85677.1 MF324915_p77 hypothetical protein phrog_6045 unknown function unknown function 1 52078 52473
ASR85609.1 MF324915_p8 capsid maturation protease phrog_1752 head maturation protease head and packaging 1 4175 6667
ASR85660.1 MF324915_p59 exonuclease phrog_1674 exonuclease DNA, RNA and nucleotide metabolism 1 41956 42834
ASR85610.1 MF324915_p9 hypothetical protein phrog_1757 unknown function unknown function 1 6664 6846
ASR85639.1 MF324915_p38 hypothetical protein singleton unknown function unknown function 1 32588 32704
ASR85615.1 MF324915_p14 head-to-tail connector protein phrog_387 neck protein connector 1 9375 9647
ASR85605.1 MF324915_p4 hypothetical protein phrog_2622 unknown function unknown function 1 777 977
ASR85668.1 MF324915_p67 DNA primase/polymerase phrog_2478 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 45222 47834
ASR85630.1 MF324915_p29 lysin B phrog_102 endolysin lysis 1 26539 27276
ASR85624.1 MF324915_p23 minor tail protein phrog_1565 minor tail protein tail 1 19572 20654
ASR85678.1 MF324915_p78 hypothetical protein phrog_19203 unknown function unknown function 1 52552 52740
ASR85672.1 MF324915_p72 hypothetical protein phrog_4269 unknown function unknown function 1 50438 50671
ASR85697.1 MF324915_p97 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 61886 62176
ASR85620.1 MF324915_p19 tape measure protein phrog_971 endolysin lysis 1 11863 16011
ASR85607.1 MF324915_p6 terminase large subunit phrog_2 terminase large subunit head and packaging 1 1181 2605
ASR85619.1 MF324915_p17 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 10940 11862
ASR85618.1 MF324915_p18 tail assembly chaperone phrog_1861 unknown function unknown function 1 10940 11455
ASR85652.1 MF324915_p51 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 38553 38807
ASR85612.1 MF324915_p11 major capsid protein phrog_10 major head protein head and packaging 1 7569 8492
ASR85673.1 MF324915_p73 hypothetical protein phrog_1338 unknown function unknown function 1 50668 50943
ASR85611.1 MF324915_p10 scaffolding protein phrog_1793 head scaffolding protein head and packaging 1 6944 7507
ASR85661.1 MF324915_p60 hypothetical protein phrog_3492 unknown function unknown function 1 42831 43004
ASR85683.1 MF324915_p83 hypothetical protein phrog_666 unknown function unknown function 1 54887 55099
ASR85645.1 MF324915_p44 CRO protein phrog_1702 transcriptional repressor transcription regulation 1 36236 36478
ASR85631.1 MF324915_p30 holin phrog_565 holin lysis 1 27287 27751
ASR85694.1 MF324915_p94 hypothetical protein phrog_4095 unknown function unknown function 1 60238 60927
ASR85643.1 MF324915_p42 membrane protein phrog_950 unknown function unknown function -1 34689 35522
ASR85656.1 MF324915_p55 hypothetical protein phrog_3186 unknown function unknown function 1 40361 40816
ASR85614.1 MF324915_p13 head-to-tail connector protein phrog_763 head-tail adaptor connector 1 8999 9385
ASR85687.1 MF324915_p87 hypothetical protein phrog_2493 unknown function unknown function 1 57370 57936
ASR85606.1 MF324915_p5 terminase small subunit phrog_1459 terminase small subunit head and packaging 1 970 1197
ASR85686.1 MF324915_p86 hypothetical protein phrog_2822 unknown function unknown function 1 56691 57377
ASR85629.1 MF324915_p28 lysin A phrog_1519 endolysin lysis 1 24839 26542
ASR85681.1 MF324915_p81 hypothetical protein phrog_14052 unknown function unknown function 1 54064 54630
ASR85634.1 MF324915_p33 nuclease phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 28327 29460
ASR85617.1 MF324915_p16 major tail protein phrog_117 major tail protein tail 1 10111 10827
ASR85682.1 MF324915_p82 hypothetical protein phrog_5288 unknown function unknown function 1 54627 54890
ASR85691.1 MF324915_p91 hypothetical protein singleton unknown function unknown function 1 59305 59529
ASR85663.1 MF324915_p62 hypothetical protein phrog_1581 unknown function unknown function 1 43547 43759
ASR85692.1 MF324915_p92 hypothetical protein phrog_4560 unknown function unknown function 1 59757 60005
ASR85602.1 MF324915_p1 hypothetical protein phrog_5391 unknown function unknown function 1 52 195
ASR85685.1 MF324915_p85 RNA ligase phrog_1075 tRNA splicing ligase DNA, RNA and nucleotide metabolism 1 55502 56689
ASR85637.1 MF324915_p36 hypothetical protein singleton unknown function unknown function -1 30387 30869
ASR85674.1 MF324915_p74 hypothetical protein phrog_21827 membrane protein moron, auxiliary metabolic gene and host takeover 1 50986 51285
ASR85654.1 MF324915_p53 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision 1 39598 39984
ASR85690.1 MF324915_p90 hypothetical protein phrog_2433 unknown function unknown function 1 58501 59190
ASR85662.1 MF324915_p61 hypothetical protein phrog_9435 unknown function unknown function 1 43068 43550
ASR85679.1 MF324915_p79 helix-turn-helix DNA binding domain protein phrog_2342 unknown function unknown function 1 52833 53675
ASR85667.1 MF324915_p66 HNH endonuclease phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 44807 45178
ASR85621.1 MF324915_p20 minor tail protein phrog_106 minor tail protein tail 1 16119 17255
ASR85641.1 MF324915_p40 hypothetical protein singleton unknown function unknown function -1 33007 33273
ASR85625.1 MF324915_p24 minor tail protein phrog_1736 minor tail protein tail 1 20660 20974
ASR85642.1 MF324915_p41 integrase phrog_1 integrase integration and excision 1 33316 34692
ASR85646.1 MF324915_p45 excise phrog_66 excisionase and transcriptional regulator integration and excision 1 36475 36687
ASR85671.1 MF324915_p71 helix-turn-helix DNA binding domain protein phrog_908 unknown function unknown function 1 49342 50448
ASR85696.1 MF324915_p96 hypothetical protein phrog_4561 unknown function unknown function 1 61635 61889
ASR85655.1 MF324915_p54 hypothetical protein phrog_301 secreted protein other 1 40020 40364
ASR85669.1 MF324915_p69 resolvase phrog_3055 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 48229 48930
ASR85636.1 MF324915_p35 helix-turn-helix DNA binding protein phrog_2311 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 29864 30322
ASR85644.1 MF324915_p43 immunity repressor phrog_1746 transcriptional repressor transcription regulation -1 35581 36096
ASR85651.1 MF324915_p50 helix-turn-helix DNA binding protein phrog_2286 unknown function unknown function 1 37771 38556
ASR85604.1 MF324915_p3 hypothetical protein singleton unknown function unknown function 1 560 676
ASR85684.1 MF324915_p84 hypothetical protein phrog_19138 unknown function unknown function 1 55107 55400
ASR85628.1 MF324915_p27 hypothetical protein phrog_240 head protein head and packaging 1 24446 24817
ASR85627.1 MF324915_p26 minor tail protein phrog_416 minor tail protein tail 1 23356 24351
ASR85670.1 MF324915_p70 hypothetical protein phrog_3478 unknown function unknown function 1 48923 49345
ASR85693.1 MF324915_p93 hypothetical protein phrog_12202 unknown function unknown function 1 60005 60127
ASR85665.1 MF324915_p64 hypothetical protein phrog_1911 unknown function unknown function 1 43961 44473
ASR85658.1 MF324915_p57 DNA polymerase III subunit phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 41112 41666
ASR85613.1 MF324915_p12 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 8610 8999
ASR85632.1 MF324915_p31 hypothetical protein phrog_3413 unknown function unknown function 1 27748 28086
ASR85622.1 MF324915_p21 minor tail protein phrog_110 minor tail protein tail 1 17216 19009
ASR85649.1 MF324915_p48 hypothetical protein phrog_2654 unknown function unknown function 1 37350 37520
ASR85626.1 MF324915_p25 minor tail protein phrog_746 minor tail protein tail 1 20975 23359
ASR85633.1 MF324915_p32 hypothetical protein phrog_1738 unknown function unknown function 1 28083 28340
ASR85603.1 MF324915_p2 hypothetical protein phrog_2293 unknown function unknown function 1 192 413
ASR85640.1 MF324915_p39 hypothetical protein phrog_12017 unknown function unknown function -1 32798 33010
ASR85698.1 MF324915_p68 hypothetical protein singleton unknown function unknown function -1 47973 48209
ASR85635.1 MF324915_p34 hypothetical protein phrog_1042 unknown function unknown function 1 29490 29714
ASR85695.1 MF324915_p95 hypothetical protein phrog_747 unknown function unknown function 1 60967 61620
ASR85676.1 MF324915_p76 hypothetical protein phrog_5546 unknown function unknown function 1 51678 51947
ASR85675.1 MF324915_p75 hypothetical protein phrog_7658 unknown function unknown function 1 51407 51676
ASR85657.1 MF324915_p56 hypothetical protein phrog_1956 unknown function unknown function 1 40809 41099
ASR85666.1 MF324915_p65 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 44496 44807
ASR85680.1 MF324915_p80 hypothetical protein phrog_7731 unknown function unknown function 1 53672 54070
ASR85638.1 MF324915_p37 DNA methylase phrog_67 DNA methyltransferase other -1 30907 32538
ASR85608.1 MF324915_p7 portal protein phrog_104 portal protein head and packaging 1 2617 4170
ASR85648.1 MF324915_p47 hypothetical protein phrog_6733 unknown function unknown function 1 37114 37353
ASR85664.1 MF324915_p63 hypothetical protein phrog_2388 unknown function unknown function 1 43756 43878
ASR85650.1 MF324915_p49 hypothetical protein phrog_3903 unknown function unknown function 1 37517 37774
ASR85647.1 MF324915_p46 hypothetical protein phrog_2908 unknown function unknown function 1 36691 37038
ASR85623.1 MF324915_p22 minor tail protein phrog_1697 minor tail protein tail 1 19009 19494
ASR85616.1 MF324915_p15 head-to-tail connector protein phrog_123 tail terminator connector 1 9644 10060