| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF356679 |
Definition |
Escherichia phage D6, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae. |
DB of origin |
NUCCORE |
Length |
91159 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
118 |
%GC |
47.01 |
Number of singletons |
5 |
Number of paralogs |
4 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASR76344.1 | MF356679_p41 | morphogenetic function protein | phrog_1854 | PmgB-like head morphogenesis | head and packaging | -1 | 44631 | 45452 |
| ASR76338.1 | MF356679_p35 | long tail fiber protein | phrog_454 | tail fiber protein | tail | -1 | 34808 | 37627 |
| ASR76421.1 | MF356679_p59 | StbB type plasmid stability protein | phrog_8671 | partition protein | DNA, RNA and nucleotide metabolism | 1 | 58109 | 58447 |
| ASR76347.1 | MF356679_p44 | morphogenetic function protein | phrog_1851 | PmgC-like head morphogenesis | head and packaging | -1 | 47701 | 48252 |
| ASR76388.1 | MF356679_p50 | hypothetical protein | singleton | unknown function | unknown function | -1 | 52273 | 52377 |
| ASR76413.1 | MF356679_p114 | hypothetical protein | phrog_872 | unknown function | unknown function | -1 | 88126 | 88566 |
| ASR76353.1 | MF356679_p60 | hypothetical protein | phrog_164 | ParA-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 58735 | 59376 |
| ASR76423.1 | MF356679_p67 | tail tape measure protein | phrog_1390 | tail protein | tail | -1 | 64812 | 65792 |
| ASR76424.1 | MF356679_p80 | hypothetical protein | phrog_4915 | unknown function | unknown function | -1 | 73182 | 73532 |
| ASR76325.1 | MF356679_p15 | defense against restriction | phrog_1685 | unknown function | unknown function | -1 | 12283 | 19119 |
| ASR76339.1 | MF356679_p36 | tail fiber assembly protein | phrog_2032 | tail fiber assembly protein | tail | -1 | 37630 | 38076 |
| ASR76318.1 | MF356679_p2 | terminase | phrog_2 | terminase large subunit | head and packaging | -1 | 1292 | 2800 |
| ASR76367.1 | MF356679_p82 | anti-repressor | phrog_63 | anti-repressor Ant | transcription regulation | -1 | 74022 | 74963 |
| ASR76342.1 | MF356679_p39 | morphogenetic protein | phrog_1896 | unknown function | unknown function | -1 | 40454 | 40828 |
| ASR76368.1 | MF356679_p83 | inhibition of cell division | phrog_1426 | unknown function | unknown function | -1 | 74963 | 75178 |
| ASR76361.1 | MF356679_p71 | HigA family addiction module anti-toxin | phrog_1381 | plasmid antitoxin with HTH domain | moron, auxiliary metabolic gene and host takeover | 1 | 67887 | 68225 |
| ASR76358.1 | MF356679_p68 | hypothetical protein | phrog_1767 | baseplate protein | tail | -1 | 65796 | 66563 |
| ASR76375.1 | MF356679_p115 | deoxyuridine 5'-triphosphate nucleotidohydrolase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | -1 | 88581 | 89075 |
| ASR76397.1 | MF356679_p76 | hypothetical protein | singleton | unknown function | unknown function | 1 | 71018 | 71101 |
| ASR76404.1 | MF356679_p93 | hypothetical protein | phrog_6797 | unknown function | unknown function | 1 | 78777 | 79097 |
| ASR76334.1 | MF356679_p30 | holin | phrog_1527 | holin | lysis | -1 | 31152 | 31478 |
| ASR76394.1 | MF356679_p61 | hypothetical protein | phrog_9169 | unknown function | unknown function | 1 | 59369 | 59656 |
| ASR76369.1 | MF356679_p87 | RecA-dependent endonuclease | phrog_2321 | Ref-like RecA filament endonuclease | DNA, RNA and nucleotide metabolism | -1 | 75990 | 76568 |
| ASR76351.1 | MF356679_p51 | major capsid protein | phrog_1014 | unknown function | unknown function | -1 | 52377 | 54074 |
| ASR76372.1 | MF356679_p107 | DNA polymerase III theta subunit-like protein | phrog_27764 | DNA polymerase III theta subunit | DNA, RNA and nucleotide metabolism | 1 | 85294 | 85440 |
| ASR76336.1 | MF356679_p33 | tail fiber assembly protein | phrog_136 | tail fiber assembly protein | tail | 1 | 33715 | 34248 |
| ASR76330.1 | MF356679_p26 | defense against restriction | phrog_1855 | DdrA-like anti-restriction protein | moron, auxiliary metabolic gene and host takeover | -1 | 27792 | 28166 |
| ASR76384.1 | MF356679_p23 | hypothetical protein | phrog_13843 | unknown function | unknown function | -1 | 25273 | 25605 |
| ASR76322.1 | MF356679_p1 | prophage repressor | phrog_1678 | unknown function | unknown function | 1 | 227 | 1264 |
| ASR76363.1 | MF356679_p74 | tail protein | phrog_1722 | tail protein | tail | -1 | 69466 | 70659 |
| ASR76370.1 | MF356679_p97 | serine/threonine protein phosphatase | phrog_246 | NinI-like serine-threonine phosphatase | other | 1 | 79990 | 80682 |
| ASR76381.1 | MF356679_p17 | hypothetical protein | phrog_7385 | unknown function | unknown function | -1 | 19789 | 19986 |
| ASR76390.1 | MF356679_p54 | hypothetical protein | phrog_17138 | unknown function | unknown function | -1 | 55088 | 55309 |
| ASR76362.1 | MF356679_p72 | HigA family addiction module anti-toxin | phrog_1373 | transcriptional regulator | transcription regulation | 1 | 68282 | 68641 |
| ASR76406.1 | MF356679_p96 | hypothetical protein | phrog_1372 | unknown function | unknown function | 1 | 79682 | 79993 |
| ASR76428.1 | MF356679_p94 | hypothetical protein | phrog_667 | unknown function | unknown function | 1 | 79189 | 79464 |
| ASR76403.1 | MF356679_p90 | hypothetical protein | phrog_323 | transcriptional regulator, D5-like | transcription regulation | 1 | 77449 | 77766 |
| ASR76415.1 | MF356679_p117 | hypothetical protein | phrog_1968 | unknown function | unknown function | -1 | 89545 | 89889 |
| ASR76392.1 | MF356679_p56 | hypothetical protein | phrog_1559 | unknown function | unknown function | -1 | 55783 | 56589 |
| ASR76412.1 | MF356679_p113 | hypothetical protein | phrog_2326 | unknown function | unknown function | -1 | 87343 | 88119 |
| ASR76355.1 | MF356679_p63 | site-specific DNA-adenine methylase | phrog_56 | DNA methyltransferase | other | -1 | 61635 | 62540 |
| ASR76366.1 | MF356679_p81 | morphogenetic function protein | phrog_7349 | unknown function | unknown function | -1 | 73678 | 73962 |
| ASR76374.1 | MF356679_p111 | toxin of addiction system | phrog_577 | Doc-like toxin | moron, auxiliary metabolic gene and host takeover | 1 | 86728 | 87108 |
| ASR76352.1 | MF356679_p58 | StbA type plasmid stability protein | phrog_691 | partition protein | DNA, RNA and nucleotide metabolism | 1 | 57140 | 58096 |
| ASR76407.1 | MF356679_p98 | hypothetical protein | phrog_96 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 80781 | 81776 |
| ASR76429.1 | MF356679_p99 | hypothetical protein | phrog_4030 | unknown function | unknown function | 1 | 81790 | 82089 |
| ASR76349.1 | MF356679_p47 | baseplate protein | phrog_1053 | unknown function | unknown function | -1 | 49447 | 50181 |
| ASR76320.1 | MF356679_p9 | prohead scaffolding protein | phrog_1660 | PmgS-like head morphogenesis | head and packaging | -1 | 9085 | 10308 |
| ASR76327.1 | MF356679_p19 | inhibition of cell division | phrog_1426 | unknown function | unknown function | -1 | 20693 | 20917 |
| ASR76400.1 | MF356679_p85 | hypothetical protein | phrog_7786 | unknown function | unknown function | -1 | 75491 | 75658 |
| ASR76350.1 | MF356679_p48 | tail sheath protein | phrog_1036 | tail sheath | tail | -1 | 50225 | 51883 |
| ASR76433.1 | MF356679_p106 | hypothetical protein | phrog_2594 | unknown function | unknown function | -1 | 84911 | 85261 |
| ASR76341.1 | MF356679_p38 | baseplate J wedge protein | phrog_1369 | baseplate protein | tail | -1 | 39027 | 40457 |
| ASR76326.1 | MF356679_p18 | anti-repressor | phrog_63 | anti-repressor Ant | transcription regulation | -1 | 19986 | 20693 |
| ASR76359.1 | MF356679_p69 | tail protein | phrog_1906 | tail protein | tail | -1 | 66560 | 67351 |
| ASR76402.1 | MF356679_p88 | hypothetical protein | phrog_8890 | unknown function | unknown function | 1 | 76689 | 76841 |
| ASR76387.1 | MF356679_p49 | hypothetical protein | phrog_215 | structural protein with Ig domain | head and packaging | -1 | 51951 | 52229 |
| ASR76321.1 | MF356679_p10 | morphogenetic function protein | phrog_9115 | unknown function | unknown function | -1 | 10407 | 10706 |
| ASR76377.1 | MF356679_p5 | hypothetical protein | phrog_7004 | unknown function | unknown function | -1 | 4662 | 5054 |
| ASR76391.1 | MF356679_p55 | hypothetical protein | phrog_214 | Rz-like spanin | lysis | -1 | 55254 | 55706 |
| ASR76426.1 | MF356679_p91 | hypothetical protein | phrog_492 | unknown function | unknown function | 1 | 77756 | 78112 |
| ASR76333.1 | MF356679_p29 | holin antagonist | phrog_1898 | lysis determining protein | lysis | -1 | 30706 | 31152 |
| ASR76385.1 | MF356679_p24 | hypothetical protein | phrog_18019 | unknown function | unknown function | -1 | 25650 | 26207 |
| ASR76396.1 | MF356679_p73 | hypothetical protein | phrog_8191 | unknown function | unknown function | 1 | 68704 | 69432 |
| ASR76399.1 | MF356679_p84 | hypothetical protein | singleton | unknown function | unknown function | 1 | 75234 | 75533 |
| ASR76405.1 | MF356679_p95 | hypothetical protein | phrog_4132 | unknown function | unknown function | 1 | 79461 | 79685 |
| ASR76354.1 | MF356679_p62 | glutaminyl-tRNA synthetase | phrog_12136 | unknown function | unknown function | 1 | 59925 | 61586 |
| ASR76357.1 | MF356679_p66 | baseplate | phrog_430 | baseplate hub subunit and tail lysozyme | tail | -1 | 64162 | 64815 |
| ASR76416.1 | MF356679_p4 | late gene transcriptional activator | phrog_1704 | Lpa-like transcriptional activator | transcription regulation | -1 | 4161 | 4553 |
| ASR76408.1 | MF356679_p100 | hypothetical protein | phrog_250 | unknown function | unknown function | 1 | 82076 | 82723 |
| ASR76378.1 | MF356679_p6 | hypothetical protein | phrog_7362 | unknown function | unknown function | -1 | 5054 | 5629 |
| ASR76380.1 | MF356679_p11 | hypothetical protein | phrog_7206 | unknown function | unknown function | -1 | 10703 | 10903 |
| ASR76360.1 | MF356679_p70 | RelE family mRNA endonuclease addiction module toxin | phrog_3066 | toxin of TA system | moron, auxiliary metabolic gene and host takeover | 1 | 67514 | 67816 |
| ASR76431.1 | MF356679_p102 | hypothetical protein | phrog_926 | unknown function | unknown function | 1 | 82903 | 83118 |
| ASR76379.1 | MF356679_p7 | hypothetical protein | phrog_1470 | TciB-like inhibition of cell division or resistance to colicin | moron, auxiliary metabolic gene and host takeover | -1 | 6279 | 6443 |
| ASR76432.1 | MF356679_p103 | hypothetical protein | phrog_8930 | unknown function | unknown function | 1 | 83120 | 83575 |
| ASR76419.1 | MF356679_p46 | morphogenetic function protein | phrog_1114 | PmgG-like head morphogenesis | head and packaging | -1 | 48807 | 49379 |
| ASR76410.1 | MF356679_p109 | hypothetical protein | phrog_7512 | unknown function | unknown function | 1 | 85976 | 86398 |
| ASR76328.1 | MF356679_p21 | head processing protease | phrog_1801 | tail fiber protein | tail | -1 | 22494 | 23492 |
| ASR76337.1 | MF356679_p34 | tail fiber assembly protein | phrog_136 | tail fiber assembly protein | tail | -1 | 34277 | 34807 |
| ASR76348.1 | MF356679_p45 | baseplate structural protein | phrog_1120 | tail tube protein | tail | -1 | 48307 | 48798 |
| ASR76417.1 | MF356679_p16 | peptidoglycan hydrolase | phrog_1259 | baseplate hub subunit and tail lysozyme | tail | 1 | 19271 | 19756 |
| ASR76356.1 | MF356679_p65 | recombination associated protein of RdgC family | phrog_724 | exonuclease recombination-associated | DNA, RNA and nucleotide metabolism | -1 | 63197 | 64102 |
| ASR76430.1 | MF356679_p101 | hypothetical protein | phrog_1380 | unknown function | unknown function | 1 | 82710 | 82901 |
| ASR76371.1 | MF356679_p104 | hypothetical protein | phrog_60 | unknown function | unknown function | 1 | 83586 | 84668 |
| ASR76386.1 | MF356679_p25 | hypothetical protein | phrog_5143 | unknown function | unknown function | -1 | 26333 | 27697 |
| ASR76345.1 | MF356679_p42 | hypothetical protein | phrog_4402 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 45841 | 46596 |
| ASR76331.1 | MF356679_p27 | hypothetical protein | phrog_1926 | released from the phage upon host infection | other | -1 | 28166 | 30103 |
| ASR76324.1 | MF356679_p14 | defense against restriction | phrog_1629 | Ulx-like anti-restriction | moron, auxiliary metabolic gene and host takeover | -1 | 11812 | 12246 |
| ASR76393.1 | MF356679_p57 | hypothetical protein | phrog_281 | PAAR motif of membran proteins | moron, auxiliary metabolic gene and host takeover | -1 | 56589 | 56873 |
| ASR76382.1 | MF356679_p13 | hypothetical protein | phrog_6844 | unknown function | unknown function | -1 | 11549 | 11809 |
| ASR76418.1 | MF356679_p31 | DNA invertase | phrog_125 | DNA invertase | DNA, RNA and nucleotide metabolism | 1 | 31584 | 32144 |
| ASR76401.1 | MF356679_p86 | hypothetical protein | singleton | unknown function | unknown function | -1 | 75655 | 75777 |
| ASR76420.1 | MF356679_p53 | hypothetical protein | phrog_8101 | unknown function | unknown function | 1 | 54642 | 55100 |
| ASR76346.1 | MF356679_p43 | major tail tube structural protein | phrog_1842 | tail tube protein | tail | -1 | 46978 | 47685 |
| ASR76373.1 | MF356679_p110 | anti-toxin of addiction system | phrog_375 | Phd-like antitoxin | moron, auxiliary metabolic gene and host takeover | 1 | 86507 | 86728 |
| ASR76365.1 | MF356679_p79 | superimmunity accessory function protein | phrog_13054 | unknown function | unknown function | 1 | 72246 | 73142 |
| ASR76340.1 | MF356679_p37 | hypothetical protein | phrog_2015 | tail tube protein | tail | -1 | 38171 | 39016 |
| ASR76409.1 | MF356679_p105 | hypothetical protein | phrog_21843 | unknown function | unknown function | 1 | 84652 | 84804 |
| ASR76376.1 | MF356679_p118 | tyrosine recombinase | phrog_1 | integrase | integration and excision | -1 | 89963 | 90991 |
| ASR76414.1 | MF356679_p116 | hypothetical protein | phrog_6669 | unknown function | unknown function | -1 | 89072 | 89548 |
| ASR76329.1 | MF356679_p22 | portal protein | phrog_1497 | portal protein | head and packaging | -1 | 23506 | 25188 |
| ASR76317.1 | MF356679_p3 | terminase | phrog_1711 | terminase | head and packaging | -1 | 2800 | 4164 |
| ASR76427.1 | MF356679_p92 | hypothetical protein | phrog_368 | unknown function | unknown function | 1 | 78109 | 78777 |
| ASR76389.1 | MF356679_p52 | hypothetical protein | phrog_7830 | unknown function | unknown function | 1 | 54233 | 54625 |
| ASR76323.1 | MF356679_p12 | morphogenetic function protein | singleton | unknown function | unknown function | -1 | 10918 | 11412 |
| ASR76343.1 | MF356679_p40 | tail injection transglycosylase | phrog_7182 | tail injection transglycosylase | other | -1 | 40834 | 44616 |
| ASR76422.1 | MF356679_p64 | DNA-cytosine methylase | phrog_757 | DNA methyltransferase | other | -1 | 62533 | 63213 |
| ASR76335.1 | MF356679_p32 | tail fiber protein | phrog_454 | tail fiber protein | tail | 1 | 32192 | 33712 |
| ASR76383.1 | MF356679_p20 | lytic replication protein | phrog_2418 | unknown function | unknown function | -1 | 21331 | 22293 |
| ASR76411.1 | MF356679_p112 | hypothetical protein | phrog_3345 | unknown function | unknown function | 1 | 87113 | 87310 |
| ASR76425.1 | MF356679_p89 | hypothetical protein | phrog_5781 | unknown function | unknown function | 1 | 76841 | 77452 |
| ASR76332.1 | MF356679_p28 | hypothetical protein | phrog_1620 | Hdf-like antirestriction | moron, auxiliary metabolic gene and host takeover | -1 | 30096 | 30716 |
| ASR76319.1 | MF356679_p8 | hypothetical protein | phrog_632 | tellurite resistance | moron, auxiliary metabolic gene and host takeover | -1 | 6443 | 6877 |
| ASR76395.1 | MF356679_p75 | baseplate | phrog_1269 | baseplate wedge subunit | tail | -1 | 70652 | 70981 |
| ASR76364.1 | MF356679_p78 | maturation of virion | phrog_1837 | unknown function | unknown function | -1 | 71310 | 71963 |
| ASR76398.1 | MF356679_p77 | hypothetical protein | phrog_38362 | unknown function | unknown function | 1 | 71175 | 71309 |
| ASR76434.1 | MF356679_p108 | DNA polymerase V umuD-like protein | phrog_811 | UmuD-like protein | DNA, RNA and nucleotide metabolism | 1 | 85452 | 85841 |