| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF370964 |
Definition |
Pseudoalteromonas phage SL20, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae. |
DB of origin |
NUCCORE |
Length |
120295 |
Host Name |
Pseudoalteromonas sp. |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
95 |
%GC |
35.84 |
Number of singletons |
8 |
Number of paralogs |
4 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASU03340.1 | MF370964_p53 | hypothetical protein | phrog_374 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 64211 | 65299 |
| ASU03362.1 | MF370964_p75 | hypothetical protein | phrog_6 | baseplate wedge subunit | tail | -1 | 95820 | 97262 |
| ASU03330.1 | MF370964_p43 | hypothetical protein | phrog_23713 | unknown function | unknown function | 1 | 48114 | 48374 |
| ASU03376.1 | MF370964_p89 | hypothetical protein | phrog_222 | tail completion or Neck1 protein | connector | -1 | 108549 | 108899 |
| ASU03315.1 | MF370964_p28 | hypothetical protein | phrog_99 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 36112 | 36633 |
| ASU03312.1 | MF370964_p25 | dihydrofolate reductase | phrog_316 | dihydrofolate reductase | DNA, RNA and nucleotide metabolism | 1 | 32555 | 33070 |
| ASU03373.1 | MF370964_p86 | hypothetical protein | phrog_205 | tail sheath | tail | -1 | 106071 | 107447 |
| ASU03291.1 | MF370964_p4 | hypothetical protein | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 4089 | 4613 |
| ASU03306.1 | MF370964_p19 | hypothetical protein | phrog_23213 | unknown function | unknown function | 1 | 24717 | 24932 |
| ASU03300.1 | MF370964_p13 | hypothetical protein | phrog_26683 | unknown function | unknown function | 1 | 15971 | 16429 |
| ASU03309.1 | MF370964_p22 | hypothetical protein | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 26768 | 28357 |
| ASU03292.1 | MF370964_p5 | hypothetical protein | phrog_8084 | unknown function | unknown function | -1 | 4977 | 5162 |
| ASU03361.1 | MF370964_p74 | hypothetical protein | phrog_22472 | unknown function | unknown function | -1 | 94904 | 95818 |
| ASU03331.1 | MF370964_p44 | hypothetical protein | phrog_1672 | unknown function | unknown function | 1 | 48546 | 48962 |
| ASU03369.1 | MF370964_p82 | hypothetical protein | phrog_23370 | tail length tape measure protein | tail | -1 | 103367 | 104725 |
| ASU03377.1 | MF370964_p90 | hypothetical protein | phrog_2663 | unknown function | unknown function | -1 | 109215 | 109763 |
| ASU03335.1 | MF370964_p48 | hypothetical protein | phrog_799 | DNA methyltransferase | other | 1 | 52766 | 53287 |
| ASU03311.1 | MF370964_p24 | homing endonuclease HNH | phrog_1985 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 30403 | 30987 |
| ASU03368.1 | MF370964_p81 | HNH homing endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 101790 | 102476 |
| ASU03350.1 | MF370964_p63 | hypothetical protein | phrog_600 | unknown function | unknown function | -1 | 75613 | 76236 |
| ASU03380.1 | MF370964_p93 | SohB protein | phrog_53 | head maturation protease | head and packaging | -1 | 113819 | 115276 |
| ASU03342.1 | MF370964_p55 | hypothetical protein | phrog_16704 | unknown function | unknown function | -1 | 66387 | 66791 |
| ASU03307.1 | MF370964_p20 | hypothetical protein | phrog_724 | exonuclease recombination-associated | DNA, RNA and nucleotide metabolism | 1 | 25043 | 25939 |
| ASU03341.1 | MF370964_p54 | phosphatase | phrog_335 | phosphatase | other | -1 | 65907 | 66383 |
| ASU03356.1 | MF370964_p69 | hypothetical protein | phrog_681 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 84198 | 85244 |
| ASU03329.1 | MF370964_p42 | 5' to 3' DNA helicase-like protein | phrog_289 | GTP-binding domain | other | 1 | 47758 | 48099 |
| ASU03325.1 | MF370964_p38 | hypothetical protein | phrog_111 | DNA methyltransferase | other | 1 | 43439 | 44023 |
| ASU03355.1 | MF370964_p68 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 81426 | 83969 |
| ASU03323.1 | MF370964_p36 | hypothetical protein | phrog_8676 | unknown function | unknown function | 1 | 43031 | 43219 |
| ASU03359.1 | MF370964_p72 | hypothetical protein | singleton | unknown function | unknown function | -1 | 89770 | 92049 |
| ASU03314.1 | MF370964_p27 | ribonucleoside triphosphate reductase alpha chain | phrog_3844 | NrdA-like aerobic NDP reductase large subunit | moron, auxiliary metabolic gene and host takeover | 1 | 35168 | 36133 |
| ASU03332.1 | MF370964_p45 | hypothetical protein | phrog_26439 | unknown function | unknown function | 1 | 49848 | 50054 |
| ASU03302.1 | MF370964_p15 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 17452 | 18795 |
| ASU03334.1 | MF370964_p47 | hypothetical protein | singleton | unknown function | unknown function | 1 | 51882 | 52385 |
| ASU03304.1 | MF370964_p17 | hypothetical protein | phrog_4521 | unknown function | unknown function | 1 | 20112 | 21026 |
| ASU03347.1 | MF370964_p60 | hypothetical protein | phrog_24300 | unknown function | unknown function | -1 | 71074 | 71253 |
| ASU03351.1 | MF370964_p64 | hypothetical protein | phrog_28382 | unknown function | unknown function | 1 | 78531 | 78713 |
| ASU03318.1 | MF370964_p31 | hypothetical protein | phrog_315 | endolysin | lysis | 1 | 39277 | 39858 |
| ASU03301.1 | MF370964_p14 | hypothetical protein | phrog_6546 | unknown function | unknown function | 1 | 16410 | 16772 |
| ASU03344.1 | MF370964_p57 | hypothetical protein | phrog_953 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 68624 | 69289 |
| ASU03345.1 | MF370964_p58 | hypothetical protein | phrog_4756 | unknown function | unknown function | -1 | 69290 | 70552 |
| ASU03310.1 | MF370964_p23 | hypothetical protein | phrog_671 | nucleotide pyrophosphohydrolase | other | 1 | 29019 | 29702 |
| ASU03358.1 | MF370964_p71 | hypothetical protein | phrog_2544 | unknown function | unknown function | 1 | 88260 | 89417 |
| ASU03322.1 | MF370964_p35 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42799 | 42933 |
| ASU03327.1 | MF370964_p40 | RecD-like protein | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | 1 | 45334 | 46887 |
| ASU03308.1 | MF370964_p21 | hypothetical protein | phrog_36808 | unknown function | unknown function | 1 | 26108 | 26353 |
| ASU03319.1 | MF370964_p32 | PhoH family protein | phrog_170 | PhoH-like phosphate starvation-inducible | other | 1 | 39924 | 40730 |
| ASU03365.1 | MF370964_p78 | hypothetical protein | phrog_196 | baseplate hub | tail | -1 | 98616 | 99704 |
| ASU03326.1 | MF370964_p39 | hypothetical protein | singleton | unknown function | unknown function | 1 | 44016 | 44375 |
| ASU03353.1 | MF370964_p66 | hypothetical protein | phrog_33403 | unknown function | unknown function | 1 | 79005 | 79301 |
| ASU03378.1 | MF370964_p91 | major capsid protein | phrog_29 | major head protein | head and packaging | -1 | 112331 | 113371 |
| ASU03313.1 | MF370964_p26 | ribonucleoside diphosphate reductase subunit alpha | phrog_3987 | ribonucleotide reductase large subunit | DNA, RNA and nucleotide metabolism | 1 | 33633 | 34901 |
| ASU03299.1 | MF370964_p12 | hypothetical protein | phrog_1544 | unknown function | unknown function | -1 | 14042 | 14533 |
| ASU03382.1 | MF370964_p95 | terminase large subunit | phrog_979 | terminase large subunit | head and packaging | -1 | 117088 | 118230 |
| ASU03357.1 | MF370964_p70 | hypothetical protein | phrog_17206 | unknown function | unknown function | 1 | 87334 | 87729 |
| ASU03305.1 | MF370964_p18 | hypothetical protein | phrog_953 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 23789 | 24385 |
| ASU03298.1 | MF370964_p11 | hypothetical protein | singleton | unknown function | unknown function | 1 | 11823 | 13880 |
| ASU03297.1 | MF370964_p10 | minor structural protein | phrog_5717 | tail protein | tail | 1 | 11049 | 11801 |
| ASU03320.1 | MF370964_p33 | HNH endonuclease | phrog_374 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 40760 | 41539 |
| ASU03363.1 | MF370964_p76 | hypothetical protein | phrog_120 | baseplate wedge subunit | tail | -1 | 97277 | 97633 |
| ASU03324.1 | MF370964_p37 | hypothetical protein | phrog_37074 | unknown function | unknown function | 1 | 43206 | 43442 |
| ASU03289.1 | MF370964_p2 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1787 | 2068 |
| ASU03288.1 | MF370964_p1 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1266 | 1772 |
| ASU03367.1 | MF370964_p80 | hypothetical protein | phrog_7817 | unknown function | unknown function | -1 | 100661 | 101572 |
| ASU03295.1 | MF370964_p8 | hypothetical protein | phrog_4756 | unknown function | unknown function | -1 | 7049 | 8320 |
| ASU03381.1 | MF370964_p94 | hypothetical protein | phrog_113 | portal protein | head and packaging | -1 | 115392 | 116942 |
| ASU03337.1 | MF370964_p50 | hypothetical protein | phrog_37297 | unknown function | unknown function | -1 | 61369 | 61746 |
| ASU03339.1 | MF370964_p52 | endonuclease V | phrog_1183 | endonuclease V N-glycosylase UV repair enzyme | DNA, RNA and nucleotide metabolism | -1 | 62606 | 63112 |
| ASU03317.1 | MF370964_p30 | hypothetical protein | phrog_19206 | unknown function | unknown function | 1 | 38567 | 39277 |
| ASU03371.1 | MF370964_p84 | hypothetical protein | phrog_1613 | tail assembly chaperone | tail | -1 | 104997 | 105461 |
| ASU03321.1 | MF370964_p34 | ATP-dependent Clp protease proteolytic subunit | phrog_1684 | head maturation protease | head and packaging | 1 | 41541 | 42611 |
| ASU03348.1 | MF370964_p61 | hypothetical protein | phrog_24064 | unknown function | unknown function | -1 | 71632 | 72090 |
| ASU03296.1 | MF370964_p9 | hypothetical protein | phrog_8994 | unknown function | unknown function | -1 | 8567 | 8809 |
| ASU03316.1 | MF370964_p29 | ribonucleoside diphosphate reductase subunit beta | phrog_86 | ribonucleoside diphosphate reductase small subunit | DNA, RNA and nucleotide metabolism | 1 | 36649 | 37986 |
| ASU03328.1 | MF370964_p41 | hypothetical protein | phrog_374 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 46880 | 47692 |
| ASU03333.1 | MF370964_p46 | hypothetical protein | phrog_38683 | unknown function | unknown function | 1 | 51478 | 51885 |
| ASU03374.1 | MF370964_p87 | hypothetical protein | phrog_20405 | unknown function | unknown function | -1 | 107463 | 108179 |
| ASU03366.1 | MF370964_p79 | hypothetical protein | phrog_1517 | endolysin | lysis | -1 | 100039 | 100659 |
| ASU03303.1 | MF370964_p16 | hypothetical protein | phrog_18122 | unknown function | unknown function | 1 | 18904 | 20112 |
| ASU03336.1 | MF370964_p49 | hypothetical protein | phrog_2467 | unknown function | unknown function | -1 | 54239 | 55819 |
| ASU03370.1 | MF370964_p83 | hypothetical protein | phrog_36590 | unknown function | unknown function | -1 | 104785 | 104940 |
| ASU03294.1 | MF370964_p7 | MobE homing endonuclease | singleton | unknown function | unknown function | -1 | 5876 | 6931 |
| ASU03372.1 | MF370964_p85 | hypothetical protein | phrog_280 | virion structural protein | head and packaging | -1 | 105547 | 106059 |
| ASU03364.1 | MF370964_p77 | hypothetical protein | phrog_11 | baseplate spike | tail | -1 | 97847 | 98566 |
| ASU03352.1 | MF370964_p65 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 78715 | 79008 |
| ASU03354.1 | MF370964_p67 | primase/helicase protein | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 79352 | 81382 |
| ASU03375.1 | MF370964_p88 | hypothetical protein | phrog_939 | head protein | head and packaging | -1 | 108172 | 108552 |
| ASU03349.1 | MF370964_p62 | polynucleotide 5'-kinase and 3'-phosphatase | phrog_505 | polynucleotide kinase | other | -1 | 73201 | 74115 |
| ASU03290.1 | MF370964_p3 | exodeoxyribonuclease X | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | -1 | 2692 | 3408 |
| ASU03343.1 | MF370964_p56 | hypothetical protein | phrog_15323 | unknown function | unknown function | -1 | 66997 | 67464 |
| ASU03338.1 | MF370964_p51 | hypothetical protein | phrog_4653 | unknown function | unknown function | -1 | 62364 | 62519 |
| ASU03346.1 | MF370964_p59 | hypothetical protein | phrog_25183 | unknown function | unknown function | -1 | 70883 | 71077 |
| ASU03379.1 | MF370964_p92 | hypothetical protein | phrog_2680 | head decoration | head and packaging | -1 | 113406 | 113771 |
| ASU03293.1 | MF370964_p6 | hypothetical protein | phrog_839 | unknown function | unknown function | -1 | 5159 | 5737 |
| ASU03360.1 | MF370964_p73 | hypothetical protein | phrog_33142 | unknown function | unknown function | -1 | 92342 | 94849 |