Genomic map of Pseudoalteromonas phage SL20 (MF370964)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF370964
Definition
Pseudoalteromonas phage SL20, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
DB of origin
NUCCORE
Length
120295
Host Name
Pseudoalteromonas sp.
Host domain
Bacteria
Is prophage?
undef
Number of proteins
95
%GC
35.84
Number of singletons
8
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASU03340.1 MF370964_p53 hypothetical protein phrog_374 HNH endonuclease DNA, RNA and nucleotide metabolism -1 64211 65299
ASU03362.1 MF370964_p75 hypothetical protein phrog_6 baseplate wedge subunit tail -1 95820 97262
ASU03330.1 MF370964_p43 hypothetical protein phrog_23713 unknown function unknown function 1 48114 48374
ASU03376.1 MF370964_p89 hypothetical protein phrog_222 tail completion or Neck1 protein connector -1 108549 108899
ASU03315.1 MF370964_p28 hypothetical protein phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 36112 36633
ASU03312.1 MF370964_p25 dihydrofolate reductase phrog_316 dihydrofolate reductase DNA, RNA and nucleotide metabolism 1 32555 33070
ASU03373.1 MF370964_p86 hypothetical protein phrog_205 tail sheath tail -1 106071 107447
ASU03291.1 MF370964_p4 hypothetical protein phrog_849 DNA primase DNA, RNA and nucleotide metabolism -1 4089 4613
ASU03306.1 MF370964_p19 hypothetical protein phrog_23213 unknown function unknown function 1 24717 24932
ASU03300.1 MF370964_p13 hypothetical protein phrog_26683 unknown function unknown function 1 15971 16429
ASU03309.1 MF370964_p22 hypothetical protein phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 26768 28357
ASU03292.1 MF370964_p5 hypothetical protein phrog_8084 unknown function unknown function -1 4977 5162
ASU03361.1 MF370964_p74 hypothetical protein phrog_22472 unknown function unknown function -1 94904 95818
ASU03331.1 MF370964_p44 hypothetical protein phrog_1672 unknown function unknown function 1 48546 48962
ASU03369.1 MF370964_p82 hypothetical protein phrog_23370 tail length tape measure protein tail -1 103367 104725
ASU03377.1 MF370964_p90 hypothetical protein phrog_2663 unknown function unknown function -1 109215 109763
ASU03335.1 MF370964_p48 hypothetical protein phrog_799 DNA methyltransferase other 1 52766 53287
ASU03311.1 MF370964_p24 homing endonuclease HNH phrog_1985 HNH endonuclease DNA, RNA and nucleotide metabolism 1 30403 30987
ASU03368.1 MF370964_p81 HNH homing endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 101790 102476
ASU03350.1 MF370964_p63 hypothetical protein phrog_600 unknown function unknown function -1 75613 76236
ASU03380.1 MF370964_p93 SohB protein phrog_53 head maturation protease head and packaging -1 113819 115276
ASU03342.1 MF370964_p55 hypothetical protein phrog_16704 unknown function unknown function -1 66387 66791
ASU03307.1 MF370964_p20 hypothetical protein phrog_724 exonuclease recombination-associated DNA, RNA and nucleotide metabolism 1 25043 25939
ASU03341.1 MF370964_p54 phosphatase phrog_335 phosphatase other -1 65907 66383
ASU03356.1 MF370964_p69 hypothetical protein phrog_681 endonuclease DNA, RNA and nucleotide metabolism 1 84198 85244
ASU03329.1 MF370964_p42 5' to 3' DNA helicase-like protein phrog_289 GTP-binding domain other 1 47758 48099
ASU03325.1 MF370964_p38 hypothetical protein phrog_111 DNA methyltransferase other 1 43439 44023
ASU03355.1 MF370964_p68 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 81426 83969
ASU03323.1 MF370964_p36 hypothetical protein phrog_8676 unknown function unknown function 1 43031 43219
ASU03359.1 MF370964_p72 hypothetical protein singleton unknown function unknown function -1 89770 92049
ASU03314.1 MF370964_p27 ribonucleoside triphosphate reductase alpha chain phrog_3844 NrdA-like aerobic NDP reductase large subunit moron, auxiliary metabolic gene and host takeover 1 35168 36133
ASU03332.1 MF370964_p45 hypothetical protein phrog_26439 unknown function unknown function 1 49848 50054
ASU03302.1 MF370964_p15 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 17452 18795
ASU03334.1 MF370964_p47 hypothetical protein singleton unknown function unknown function 1 51882 52385
ASU03304.1 MF370964_p17 hypothetical protein phrog_4521 unknown function unknown function 1 20112 21026
ASU03347.1 MF370964_p60 hypothetical protein phrog_24300 unknown function unknown function -1 71074 71253
ASU03351.1 MF370964_p64 hypothetical protein phrog_28382 unknown function unknown function 1 78531 78713
ASU03318.1 MF370964_p31 hypothetical protein phrog_315 endolysin lysis 1 39277 39858
ASU03301.1 MF370964_p14 hypothetical protein phrog_6546 unknown function unknown function 1 16410 16772
ASU03344.1 MF370964_p57 hypothetical protein phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism -1 68624 69289
ASU03345.1 MF370964_p58 hypothetical protein phrog_4756 unknown function unknown function -1 69290 70552
ASU03310.1 MF370964_p23 hypothetical protein phrog_671 nucleotide pyrophosphohydrolase other 1 29019 29702
ASU03358.1 MF370964_p71 hypothetical protein phrog_2544 unknown function unknown function 1 88260 89417
ASU03322.1 MF370964_p35 hypothetical protein singleton unknown function unknown function 1 42799 42933
ASU03327.1 MF370964_p40 RecD-like protein phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism 1 45334 46887
ASU03308.1 MF370964_p21 hypothetical protein phrog_36808 unknown function unknown function 1 26108 26353
ASU03319.1 MF370964_p32 PhoH family protein phrog_170 PhoH-like phosphate starvation-inducible other 1 39924 40730
ASU03365.1 MF370964_p78 hypothetical protein phrog_196 baseplate hub tail -1 98616 99704
ASU03326.1 MF370964_p39 hypothetical protein singleton unknown function unknown function 1 44016 44375
ASU03353.1 MF370964_p66 hypothetical protein phrog_33403 unknown function unknown function 1 79005 79301
ASU03378.1 MF370964_p91 major capsid protein phrog_29 major head protein head and packaging -1 112331 113371
ASU03313.1 MF370964_p26 ribonucleoside diphosphate reductase subunit alpha phrog_3987 ribonucleotide reductase large subunit DNA, RNA and nucleotide metabolism 1 33633 34901
ASU03299.1 MF370964_p12 hypothetical protein phrog_1544 unknown function unknown function -1 14042 14533
ASU03382.1 MF370964_p95 terminase large subunit phrog_979 terminase large subunit head and packaging -1 117088 118230
ASU03357.1 MF370964_p70 hypothetical protein phrog_17206 unknown function unknown function 1 87334 87729
ASU03305.1 MF370964_p18 hypothetical protein phrog_953 HNH endonuclease DNA, RNA and nucleotide metabolism 1 23789 24385
ASU03298.1 MF370964_p11 hypothetical protein singleton unknown function unknown function 1 11823 13880
ASU03297.1 MF370964_p10 minor structural protein phrog_5717 tail protein tail 1 11049 11801
ASU03320.1 MF370964_p33 HNH endonuclease phrog_374 HNH endonuclease DNA, RNA and nucleotide metabolism 1 40760 41539
ASU03363.1 MF370964_p76 hypothetical protein phrog_120 baseplate wedge subunit tail -1 97277 97633
ASU03324.1 MF370964_p37 hypothetical protein phrog_37074 unknown function unknown function 1 43206 43442
ASU03289.1 MF370964_p2 hypothetical protein singleton unknown function unknown function -1 1787 2068
ASU03288.1 MF370964_p1 hypothetical protein singleton unknown function unknown function -1 1266 1772
ASU03367.1 MF370964_p80 hypothetical protein phrog_7817 unknown function unknown function -1 100661 101572
ASU03295.1 MF370964_p8 hypothetical protein phrog_4756 unknown function unknown function -1 7049 8320
ASU03381.1 MF370964_p94 hypothetical protein phrog_113 portal protein head and packaging -1 115392 116942
ASU03337.1 MF370964_p50 hypothetical protein phrog_37297 unknown function unknown function -1 61369 61746
ASU03339.1 MF370964_p52 endonuclease V phrog_1183 endonuclease V N-glycosylase UV repair enzyme DNA, RNA and nucleotide metabolism -1 62606 63112
ASU03317.1 MF370964_p30 hypothetical protein phrog_19206 unknown function unknown function 1 38567 39277
ASU03371.1 MF370964_p84 hypothetical protein phrog_1613 tail assembly chaperone tail -1 104997 105461
ASU03321.1 MF370964_p34 ATP-dependent Clp protease proteolytic subunit phrog_1684 head maturation protease head and packaging 1 41541 42611
ASU03348.1 MF370964_p61 hypothetical protein phrog_24064 unknown function unknown function -1 71632 72090
ASU03296.1 MF370964_p9 hypothetical protein phrog_8994 unknown function unknown function -1 8567 8809
ASU03316.1 MF370964_p29 ribonucleoside diphosphate reductase subunit beta phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 36649 37986
ASU03328.1 MF370964_p41 hypothetical protein phrog_374 HNH endonuclease DNA, RNA and nucleotide metabolism 1 46880 47692
ASU03333.1 MF370964_p46 hypothetical protein phrog_38683 unknown function unknown function 1 51478 51885
ASU03374.1 MF370964_p87 hypothetical protein phrog_20405 unknown function unknown function -1 107463 108179
ASU03366.1 MF370964_p79 hypothetical protein phrog_1517 endolysin lysis -1 100039 100659
ASU03303.1 MF370964_p16 hypothetical protein phrog_18122 unknown function unknown function 1 18904 20112
ASU03336.1 MF370964_p49 hypothetical protein phrog_2467 unknown function unknown function -1 54239 55819
ASU03370.1 MF370964_p83 hypothetical protein phrog_36590 unknown function unknown function -1 104785 104940
ASU03294.1 MF370964_p7 MobE homing endonuclease singleton unknown function unknown function -1 5876 6931
ASU03372.1 MF370964_p85 hypothetical protein phrog_280 virion structural protein head and packaging -1 105547 106059
ASU03364.1 MF370964_p77 hypothetical protein phrog_11 baseplate spike tail -1 97847 98566
ASU03352.1 MF370964_p65 hypothetical protein phrog_464 unknown function unknown function 1 78715 79008
ASU03354.1 MF370964_p67 primase/helicase protein phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 79352 81382
ASU03375.1 MF370964_p88 hypothetical protein phrog_939 head protein head and packaging -1 108172 108552
ASU03349.1 MF370964_p62 polynucleotide 5'-kinase and 3'-phosphatase phrog_505 polynucleotide kinase other -1 73201 74115
ASU03290.1 MF370964_p3 exodeoxyribonuclease X phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism -1 2692 3408
ASU03343.1 MF370964_p56 hypothetical protein phrog_15323 unknown function unknown function -1 66997 67464
ASU03338.1 MF370964_p51 hypothetical protein phrog_4653 unknown function unknown function -1 62364 62519
ASU03346.1 MF370964_p59 hypothetical protein phrog_25183 unknown function unknown function -1 70883 71077
ASU03379.1 MF370964_p92 hypothetical protein phrog_2680 head decoration head and packaging -1 113406 113771
ASU03293.1 MF370964_p6 hypothetical protein phrog_839 unknown function unknown function -1 5159 5737
ASU03360.1 MF370964_p73 hypothetical protein phrog_33142 unknown function unknown function -1 92342 94849