Genomic map of Staphylococcus phage SN11 (MF428479)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF428479
Definition
Staphylococcus phage SN11, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
40108
Host Name
Staphylococcus pseudintermedius
Host domain
Bacteria
Is prophage?
undef
Number of proteins
70
%GC
35.81
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASU01304.1 MF428479_p58 hypothetical protein phrog_14320 unknown function unknown function 1 36358 36606
ASU01277.1 MF428479_p31 hypothetical protein phrog_87 metallo-protease other -1 25212 25667
ASU01273.1 MF428479_p27 hypothetical protein phrog_419 unknown function unknown function 1 23425 23622
ASU01276.1 MF428479_p30 hypothetical protein phrog_19348 unknown function unknown function -1 24502 25155
ASU01293.1 MF428479_p47 hypothetical protein phrog_398 unknown function unknown function 1 31087 31755
ASU01307.1 MF428479_p61 hypothetical protein phrog_9739 unknown function unknown function 1 37217 37696
ASU01298.1 MF428479_p52 holliday junction resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 34329 34751
ASU01271.1 MF428479_p25 hypothetical protein phrog_635 endolysin lysis 1 21066 21821
ASU01258.1 MF428479_p12 hypothetical protein phrog_176 tail terminator connector 1 7945 8340
ASU01280.1 MF428479_p34 hypothetical protein phrog_12362 unknown function unknown function 1 26455 26616
ASU01313.1 MF428479_p67 hypothetical protein phrog_278 transcriptional regulator transcription regulation 1 38890 39078
ASU01254.1 MF428479_p8 major tail protein phrog_341 major tail protein tail 1 6488 6937
ASU01295.1 MF428479_p49 hypothetical protein phrog_2289 helicase loader DNA, RNA and nucleotide metabolism 1 32549 32890
ASU01248.1 MF428479_p2 terminase large subunit phrog_2 terminase large subunit head and packaging 1 441 1715
ASU01310.1 MF428479_p64 hypothetical protein phrog_14113 unknown function unknown function 1 38148 38303
ASU01281.1 MF428479_p35 hypothetical protein phrog_1090 unknown function unknown function -1 26620 26883
ASU01311.1 MF428479_p65 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 38296 38826
ASU01294.1 MF428479_p48 replication initiation protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 31755 32552
ASU01296.1 MF428479_p50 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 32883 34127
ASU01286.1 MF428479_p40 hypothetical protein phrog_989 unknown function unknown function 1 28425 28649
ASU01309.1 MF428479_p63 hypothetical protein phrog_7797 unknown function unknown function 1 37880 38146
ASU01315.1 MF428479_p69 hypothetical protein phrog_1367 unknown function unknown function 1 39261 39404
ASU01270.1 MF428479_p24 holin phrog_297 holin lysis 1 20799 21053
ASU01308.1 MF428479_p62 hypothetical protein phrog_4872 unknown function unknown function 1 37697 37858
ASU01249.1 MF428479_p3 portal protein phrog_64 portal protein head and packaging 1 1727 3172
ASU01299.1 MF428479_p53 hypothetical protein phrog_433 unknown function unknown function 1 34744 34962
ASU01283.1 MF428479_p37 hypothetical protein phrog_16714 unknown function unknown function 1 27240 27407
ASU01306.1 MF428479_p60 hypothetical protein phrog_12537 unknown function unknown function 1 37001 37216
ASU01301.1 MF428479_p55 hypothetical protein phrog_13457 unknown function unknown function 1 35292 35462
ASU01279.1 MF428479_p33 Cro-like repressor phrog_3 transcriptional repressor transcription regulation 1 26208 26444
ASU01291.1 MF428479_p45 DNA single-strand annealing protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 29860 30486
ASU01288.1 MF428479_p42 hypothetical protein phrog_401 unknown function unknown function 1 28895 29155
ASU01316.1 MF428479_p70 TPR domain protein phrog_36 transcriptional regulator transcription regulation 1 39405 39830
ASU01297.1 MF428479_p51 hypothetical protein phrog_3161 unknown function unknown function 1 34124 34345
ASU01285.1 MF428479_p39 antirepressor protein phrog_463 anti-repressor transcription regulation 1 27709 28428
ASU01252.1 MF428479_p6 capsid and scaffold protein phrog_172 head scaffolding protein head and packaging 1 4861 5469
ASU01278.1 MF428479_p32 CI-like repressor phrog_8 transcriptional regulator transcription regulation -1 25684 26013
ASU01262.1 MF428479_p16 tail length tape-measure protein phrog_58 tail length tape measure protein tail 1 9848 12967
ASU01247.1 MF428479_p1 terminase small subunit phrog_51 terminase small subunit head and packaging 1 11 454
ASU01269.1 MF428479_p23 bifunctional autolysin phrog_759 tail associated cell-wall hydrolase other 1 18892 20781
ASU01256.1 MF428479_p10 hypothetical protein phrog_348 minor head protein head and packaging 1 7278 7583
ASU01264.1 MF428479_p18 minor structural protein phrog_326 tail protein with endopeptidase domain other 1 13925 15322
ASU01300.1 MF428479_p54 hypothetical protein phrog_201 Panton-Valentine leukocicin DNA, RNA and nucleotide metabolism 1 34975 35295
ASU01257.1 MF428479_p11 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 7583 7933
ASU01312.1 MF428479_p66 hypothetical protein singleton unknown function unknown function 1 38780 38893
ASU01251.1 MF428479_p5 hypothetical protein phrog_1865 unknown function unknown function 1 4514 4708
ASU01255.1 MF428479_p9 hypothetical protein phrog_132 head-tail adaptor connector 1 6949 7281
ASU01260.1 MF428479_p14 hypothetical protein phrog_183 tail chaperone protein tail 1 9071 9451
ASU01287.1 MF428479_p41 hypothetical protein phrog_369 unknown function unknown function 1 28637 28813
ASU01253.1 MF428479_p7 major capsid protein phrog_544 major head protein head and packaging 1 5487 6398
ASU01250.1 MF428479_p4 hypothetical protein phrog_115 minor head protein head and packaging 1 3165 4514
ASU01267.1 MF428479_p21 minor capsid protein phrog_6183 minor tail protein tail 1 17090 18361
ASU01265.1 MF428479_p19 hypothetical protein phrog_8437 unknown function unknown function 1 15326 16018
ASU01284.1 MF428479_p38 hypothetical protein phrog_31666 unknown function unknown function -1 27404 27631
ASU01303.1 MF428479_p57 hypothetical protein phrog_4074 unknown function unknown function 1 36107 36358
ASU01282.1 MF428479_p36 hypothetical protein phrog_845 unknown function unknown function 1 26940 27134
ASU01314.1 MF428479_p68 hypothetical protein phrog_152 RinB-like transcriptional activator transcription regulation 1 39094 39261
ASU01302.1 MF428479_p56 hypothetical protein phrog_1689 nucleotide kinase other 1 35452 35904
ASU01272.1 MF428479_p26 integrase phrog_1 integrase integration and excision -1 22261 23310
ASU01275.1 MF428479_p29 hypothetical protein phrog_7395 unknown function unknown function -1 24020 24457
ASU01261.1 MF428479_p15 hypothetical protein phrog_441 tail assembly chaperone tail 1 9481 9831
ASU01259.1 MF428479_p13 tail protein phrog_238 major tail protein tail 1 8358 9011
ASU01289.1 MF428479_p43 hypothetical protein phrog_25786 unknown function unknown function 1 29167 29391
ASU01268.1 MF428479_p22 hypothetical protein phrog_3700 unknown function unknown function 1 18394 18768
ASU01305.1 MF428479_p59 hypothetical protein phrog_467 unknown function unknown function 1 36606 37001
ASU01263.1 MF428479_p17 hypothetical protein phrog_33 distal tail protein Dit tail 1 12980 13912
ASU01274.1 MF428479_p28 hypothetical protein phrog_6988 unknown function unknown function -1 23619 24026
ASU01266.1 MF428479_p20 minor structural protein phrog_5240 tail fiber protein tail 1 16030 17073
ASU01292.1 MF428479_p46 single-stranded DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 30483 31073
ASU01290.1 MF428479_p44 hypothetical protein phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 29375 29860