Genomic map of Salmonella phage vB_SenS_PVP-SE2 (MF431252)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF431252
Definition
Salmonella phage vB_SenS_PVP-SE2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Guernseyvirinae; Jerseyvirus; unclassified Jerseyvirus.
DB of origin
NUCCORE
Length
42425
Host Name
Salmonella enterica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
60
%GC
49.98
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AST15516.1 MF431252_p52 i-spanin phrog_5672 Rz-like spanin lysis -1 35962 36087
AST15508.1 MF431252_p36 superinfection immunity protein phrog_1039 immunity to superinfection moron, auxiliary metabolic gene and host takeover 1 27317 27496
AST15482.1 MF431252_p7 endolysin phrog_7 endolysin lysis -1 1667 2155
AST15472.1 MF431252_p51 scaffold protein phrog_206 head scaffolding protein head and packaging -1 35176 35877
AST15514.1 MF431252_p4 hypothetical protein phrog_4684 unknown function unknown function -1 991 1146
AST15486.1 MF431252_p9 hypothetical protein phrog_1040 peptidase HslV family other -1 2785 3219
AST15481.1 MF431252_p32 hypothetical protein phrog_384 virion structural protein head and packaging -1 23538 24038
AST15507.1 MF431252_p6 hypothetical protein phrog_2180 unknown function unknown function -1 1298 1483
AST15492.1 MF431252_p34 hypothetical protein phrog_4557 unknown function unknown function -1 26366 26725
AST15502.1 MF431252_p38 hypothetical protein phrog_2452 unknown function unknown function 1 28686 28916
AST15506.1 MF431252_p47 hypothetical protein phrog_4451 unknown function unknown function -1 33189 33377
AST15511.1 MF431252_p27 hypothetical protein phrog_5915 unknown function unknown function 1 17759 17929
AST15503.1 MF431252_p18 DNA-binding helix-turn-helix domain protein phrog_3 transcriptional repressor transcription regulation -1 8134 8352
AST15483.1 MF431252_p20 HNH endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 9054 9536
AST15479.1 MF431252_p46 hypothetical protein phrog_477 head-tail adaptor Ad1 connector -1 32676 33185
AST15488.1 MF431252_p43 tail protein phrog_169 tail completion or Neck1 protein connector -1 31317 31712
AST15517.1 MF431252_p54 hypothetical protein phrog_14923 unknown function unknown function -1 36502 36621
AST15463.1 MF431252_p17 primase/helicase phrog_3228 replicative helicase-primase DNA, RNA and nucleotide metabolism 1 5933 8119
AST15505.1 MF431252_p25 hypothetical protein phrog_4879 unknown function unknown function 1 15109 15300
AST15478.1 MF431252_p31 hypothetical protein phrog_396 minor tail protein tail -1 23026 23541
AST15495.1 MF431252_p48 neck whiskers protein phrog_4069 Hoc-like head decoration head and packaging -1 33414 33764
AST15480.1 MF431252_p60 terminase small subunit phrog_3064 terminase head and packaging -1 41880 42386
AST15465.1 MF431252_p58 portal protein phrog_145 portal protein head and packaging -1 39137 40606
AST15468.1 MF431252_p41 major tail protein phrog_290 minor tail protein tail -1 29729 30898
AST15459.1 MF431252_p23 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 11605 14703
AST15496.1 MF431252_p8 holin class I phrog_2508 holin lysis -1 2136 2423
AST15477.1 MF431252_p19 hypothetical protein phrog_3127 unknown function unknown function 1 8486 9010
AST15515.1 MF431252_p39 hypothetical protein phrog_32218 unknown function unknown function -1 28884 29030
AST15462.1 MF431252_p33 tail tape measure protein phrog_1538 tail length tape measure protein tail -1 24040 26373
AST15475.1 MF431252_p22 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 10921 11547
AST15460.1 MF431252_p29 tail fiber protein phrog_469 tail protein tail -1 20115 22673
AST15493.1 MF431252_p44 hypothetical protein phrog_161 head closure Hc1 connector -1 31709 32068
AST15464.1 MF431252_p28 tailspike protein phrog_1819 tail spike protein tail -1 18048 20102
AST15500.1 MF431252_p16 hypothetical protein phrog_5169 unknown function unknown function 1 5643 5876
AST15467.1 MF431252_p21 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism 1 9589 10839
AST15476.1 MF431252_p45 hypothetical protein phrog_3614 unknown function unknown function -1 32068 32673
AST15501.1 MF431252_p1 hypothetical protein phrog_10134 unknown function unknown function -1 95 325
AST15518.1 MF431252_p13 hypothetical protein phrog_16814 unknown function unknown function -1 4230 4337
AST15474.1 MF431252_p57 amidase phrog_6095 amidase lysis 1 38457 39107
AST15497.1 MF431252_p24 restriction endonuclease phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 14790 15077
AST15470.1 MF431252_p50 coat protein phrog_247 major head protein head and packaging -1 34123 35172
AST15494.1 MF431252_p3 hypothetical protein phrog_268 unknown function unknown function -1 638 994
AST15504.1 MF431252_p11 hypothetical protein phrog_3766 unknown function unknown function -1 3605 3808
AST15490.1 MF431252_p10 hypothetical protein phrog_4947 unknown function unknown function -1 3225 3602
AST15512.1 MF431252_p12 hypothetical protein phrog_9384 unknown function unknown function -1 3871 4035
AST15461.1 MF431252_p26 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 15297 17762
AST15469.1 MF431252_p37 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism 1 27559 28689
AST15510.1 MF431252_p15 DNA-binding helix-turn-helix domain protein phrog_66 excisionase and transcriptional regulator integration and excision 1 5476 5646
AST15491.1 MF431252_p30 hypothetical protein phrog_329 minor tail protein tail -1 22664 23029
AST15473.1 MF431252_p40 DNA-binding protein phrog_63 anti-repressor Ant transcription regulation 1 29029 29700
AST15466.1 MF431252_p59 terminase large subunit phrog_2 terminase large subunit head and packaging -1 40619 41890
AST15499.1 MF431252_p2 membrane protein phrog_2531 unknown function unknown function -1 342 620
AST15485.1 MF431252_p55 neck whiskers protein phrog_3945 Hoc-like head decoration head and packaging -1 36776 37234
AST15489.1 MF431252_p53 o-spanin phrog_2536 Rz-like spanin lysis -1 36071 36457
AST15487.1 MF431252_p42 hypothetical protein phrog_179 tail terminator connector -1 30898 31317
AST15509.1 MF431252_p14 hypothetical protein singleton unknown function unknown function -1 4405 4581
AST15471.1 MF431252_p56 head morphogenesis protein phrog_241 head morphogenesis head and packaging -1 37237 38280
AST15513.1 MF431252_p5 hypothetical protein phrog_3002 unknown function unknown function -1 1143 1301
AST15484.1 MF431252_p35 tail assembly chaperone phrog_313 Tail assembly chaperone tail -1 26731 27204
AST15498.1 MF431252_p49 head protein phrog_4366 head fiber protein head and packaging -1 33778 34062