Genomic map of Bacteriophage T5-like chee130_1 (MF431736)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF431736
Definition
Bacteriophage T5-like chee130_1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Epseptimavirus; unclassified Epseptimavirus.
DB of origin
NUCCORE
Length
121986
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
167
%GC
39.74
Number of singletons
7
Number of paralogs
15

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASU02440.1 MF431736_p77 hypothetical protein phrog_200 lipoprotein other -1 41624 42568
ASU02459.1 MF431736_p96 homing endonuclease singleton unknown function unknown function -1 53213 53542
ASU02381.1 MF431736_p18 hypothetical protein phrog_4182 unknown function unknown function -1 12382 12804
ASU02509.1 MF431736_p146 major capsid protein phrog_10 major head protein head and packaging -1 104084 105460
ASU02508.1 MF431736_p145 hypothetical protein phrog_442 head-tail adaptor connector -1 103512 104024
ASU02471.1 MF431736_p108 hypothetical protein phrog_1818 unknown function unknown function 1 62192 62707
ASU02446.1 MF431736_p83 tail fiber protein phrog_1491 tail fiber protein tail -1 45676 46314
ASU02465.1 MF431736_p102 hypothetical protein phrog_11748 unknown function unknown function 1 60271 60630
ASU02396.1 MF431736_p33 homing endonuclease phrog_4578 HNH endonuclease DNA, RNA and nucleotide metabolism -1 19750 20061
ASU02427.1 MF431736_p64 hypothetical protein phrog_5473 unknown function unknown function -1 34777 34962
ASU02494.1 MF431736_p131 deoxyuridine 5'-triphosphate nucleotidohydrolase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 85580 86026
ASU02421.1 MF431736_p58 hypothetical protein phrog_15739 unknown function unknown function -1 31757 31975
ASU02420.1 MF431736_p57 hypothetical protein phrog_11405 unknown function unknown function -1 31476 31652
ASU02377.1 MF431736_p14 hypothetical protein phrog_13456 unknown function unknown function -1 10270 10578
ASU02486.1 MF431736_p123 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 75160 77727
ASU02500.1 MF431736_p137 hypothetical protein phrog_1302 distal tail protein tail -1 94574 95188
ASU02389.1 MF431736_p26 hypothetical protein phrog_3880 unknown function unknown function -1 15163 15414
ASU02463.1 MF431736_p100 ribonucleotide reductase of class III (anaerobic), large subunit phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover 1 57557 59431
ASU02492.1 MF431736_p129 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 84226 84708
ASU02418.1 MF431736_p55 hypothetical protein phrog_2210 unknown function unknown function -1 30301 30501
ASU02384.1 MF431736_p21 hypothetical protein phrog_5967 unknown function unknown function -1 13604 13804
ASU02432.1 MF431736_p69 hypothetical protein phrog_5441 unknown function unknown function -1 37465 37587
ASU02468.1 MF431736_p105 NAD-dependent protein deacetylase of SIR2 family phrog_2162 Sir2 (NAD-dependent deacetylase) DNA, RNA and nucleotide metabolism 1 61037 61888
ASU02428.1 MF431736_p65 hypothetical protein phrog_7042 unknown function unknown function -1 35738 36010
ASU02422.1 MF431736_p59 hypothetical protein phrog_7572 unknown function unknown function -1 32510 32863
AVG19480.1 MF431736_p166 hypothetical protein phrog_19184 unknown function unknown function 1 120233 120373
ASU02382.1 MF431736_p19 capsid and scaffold protein phrog_4905 unknown function unknown function -1 12815 13066
ASU02444.1 MF431736_p81 hypothetical protein phrog_938 endolysin lysis -1 44460 44909
ASU02483.1 MF431736_p120 hypothetical protein phrog_323 transcriptional regulator, D5-like transcription regulation 1 71888 72655
ASU02491.1 MF431736_p128 recombination related exonuclease phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 82426 84222
ASU02490.1 MF431736_p127 recombinase phrog_100 SbcD-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 81426 82403
ASU02379.1 MF431736_p16 hypothetical protein phrog_5799 unknown function unknown function -1 11189 11374
ASU02410.1 MF431736_p47 hypothetical protein phrog_5021 unknown function unknown function -1 27445 27798
ASU02388.1 MF431736_p25 hypothetical protein phrog_13127 unknown function unknown function -1 14750 15082
ASU02438.1 MF431736_p75 PnuC-like ribosyl nicotinamide transporter phrog_1880 PnuC-like nicotinamide mononucleotide transport moron, auxiliary metabolic gene and host takeover -1 39617 40294
ASU02364.1 MF431736_p1 deoxynucleoside-5'-monophosphatase phrog_415 polynucleotide kinase other -1 9 743
ASU02429.1 MF431736_p66 hypothetical protein phrog_5876 unknown function unknown function -1 36060 36332
ASU02502.1 MF431736_p139 hypothetical protein phrog_3914 tail assembly chaperone tail -1 99085 99432
ASU02448.1 MF431736_p85 metallopeptidase phrog_255 exonuclease DNA, RNA and nucleotide metabolism -1 46621 47322
AVG19474.1 MF431736_p160 A2 protein phrog_1725 DNA binding protein DNA, RNA and nucleotide metabolism -1 116915 117331
ASU02497.1 MF431736_p134 hypothetical protein phrog_1084 unknown function unknown function -1 89242 89664
ASU02513.1 MF431736_p150 hypothetical protein phrog_37261 unknown function unknown function -1 107810 107950
ASU02413.1 MF431736_p50 pyruvate formate-lyase phrog_1209 unknown function unknown function -1 28489 28857
ASU02450.1 MF431736_p87 tail length tape-measure protein phrog_2380 unknown function unknown function -1 47607 47822
ASU02512.1 MF431736_p149 portal protein phrog_12 portal protein head and packaging -1 106593 107810
ASU02367.1 MF431736_p4 A1 protein phrog_1745 DNA transfer protein other -1 1587 3251
ASU02376.1 MF431736_p13 hypothetical protein phrog_8993 unknown function unknown function -1 9548 10273
ASU02373.1 MF431736_p10 hypothetical protein phrog_4227 endonuclease nicking abasic sites generated by host uracil glycosylase Ung moron, auxiliary metabolic gene and host takeover 1 6755 6967
ASU02481.1 MF431736_p118 DNA ligase phrog_3359 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 69942 70913
ASU02506.1 MF431736_p143 hypothetical protein singleton unknown function unknown function 1 102516 102659
ASU02374.1 MF431736_p11 hypothetical protein phrog_19184 unknown function unknown function 1 6964 7104
AVG19478.1 MF431736_p164 hypothetical protein phrog_5145 unknown function unknown function 1 119598 119825
ASU02476.1 MF431736_p113 hypothetical protein phrog_643 transcriptional regulator transcription regulation 1 67932 68186
ASU02466.1 MF431736_p103 hypothetical protein phrog_5236 unknown function unknown function 1 60675 60830
ASU02439.1 MF431736_p76 NadR transcriptional regulator phrog_3462 nicotinamide-nucleotide adenylyltransferase moron, auxiliary metabolic gene and host takeover -1 40296 41351
ASU02368.1 MF431736_p5 A2 protein phrog_1725 DNA binding protein DNA, RNA and nucleotide metabolism -1 3646 4062
ASU02399.1 MF431736_p36 holin phrog_860 holin lysis -1 21660 22316
ASU02433.1 MF431736_p70 hypothetical protein phrog_9447 unknown function unknown function -1 37688 38026
ASU02408.1 MF431736_p45 hypothetical protein phrog_4821 unknown function unknown function -1 26795 27094
AVG19479.1 MF431736_p165 hypothetical protein phrog_4227 endonuclease nicking abasic sites generated by host uracil glycosylase Ung moron, auxiliary metabolic gene and host takeover 1 120024 120236
ASU02380.1 MF431736_p17 hypothetical protein singleton unknown function unknown function -1 11374 11490
ASU02424.1 MF431736_p61 hypothetical protein singleton unknown function unknown function -1 33096 33266
ASU02436.1 MF431736_p73 hypothetical protein phrog_849 DNA primase DNA, RNA and nucleotide metabolism -1 38627 39028
ASU02434.1 MF431736_p71 antitermination protein Q phrog_6060 anti-termination protein Q-like transcription regulation -1 38028 38213
ASU02517.1 MF431736_p154 hypothetical protein phrog_1119 Cor superinfection exclusion protein moron, auxiliary metabolic gene and host takeover 1 112036 112302
ASU02426.1 MF431736_p63 hypothetical protein singleton unknown function unknown function 1 34453 34605
ASU02391.1 MF431736_p28 phosphoesterase phrog_547 phosphoesterase other -1 17069 17488
ASU02514.1 MF431736_p151 terminase large subunit phrog_2 terminase large subunit head and packaging -1 108362 109678
ASU02454.1 MF431736_p91 hypothetical protein phrog_13270 unknown function unknown function -1 49314 49583
ASU02404.1 MF431736_p41 hypothetical protein phrog_5468 unknown function unknown function -1 25394 25735
ASU02398.1 MF431736_p35 endolysin phrog_465 endolysin lysis -1 21250 21663
ASU02504.1 MF431736_p141 tail fibers protein phrog_3889 base plate tail tube protein tail -1 99916 100815
ASU02493.1 MF431736_p130 ribonuclease H phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 84708 85583
ASU02415.1 MF431736_p52 hypothetical protein phrog_5919 unknown function unknown function -1 29653 29817
ASU02505.1 MF431736_p142 major tail protein phrog_3575 major tail protein tail -1 100820 102229
ASU02518.1 MF431736_p155 hypothetical protein phrog_6369 unknown function unknown function 1 112756 112869
ASU02474.1 MF431736_p111 DNA primase C phrog_3712 replication origin binding DNA, RNA and nucleotide metabolism 1 64160 66949
ASU02442.1 MF431736_p79 hypothetical protein phrog_1460 tRNA amidotransferase DNA, RNA and nucleotide metabolism -1 43778 44221
ASU02460.1 MF431736_p97 ribonucleotide reductase of class Ia (aerobic), alpha subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism -1 53751 56144
ASU02482.1 MF431736_p119 DNA ligase phrog_3498 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 71116 71895
ASU02479.1 MF431736_p116 hypothetical protein phrog_20800 unknown function unknown function 1 69208 69396
ASU02375.1 MF431736_p12 hypothetical protein phrog_3474 unknown function unknown function 1 7432 7629
ASU02443.1 MF431736_p80 hypothetical protein phrog_5077 unknown function unknown function -1 44221 44391
ASU02515.1 MF431736_p152 hypothetical protein phrog_3802 terminase small subunit head and packaging -1 109678 110160
ASU02393.1 MF431736_p30 serine/threonine protein phosphatase phrog_246 NinI-like serine-threonine phosphatase other -1 17955 18818
ASU02371.1 MF431736_p8 hypothetical protein phrog_23458 unknown function unknown function 1 6096 6209
ASU02414.1 MF431736_p51 hypothetical protein phrog_4760 unknown function unknown function -1 29200 29493
ASU02405.1 MF431736_p42 hypothetical protein phrog_5265 unknown function unknown function -1 25852 26136
ASU02461.1 MF431736_p98 hypothetical protein phrog_5357 tail length tape measure protein tail -1 56208 56450
ASU02458.1 MF431736_p95 ribonucleotide reductase of class Ia (aerobic), beta subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism -1 52001 53146
ASU02447.1 MF431736_p84 hypothetical protein phrog_5252 unknown function unknown function -1 46368 46550
ASU02510.1 MF431736_p147 capsid and scaffold protein phrog_80 head maturation protease head and packaging -1 105478 106110
ASU02495.1 MF431736_p132 hypothetical protein phrog_5592 unknown function unknown function 1 85989 86255
ASU02416.1 MF431736_p53 hypothetical protein phrog_5598 unknown function unknown function -1 29810 30031
ASU02417.1 MF431736_p54 hypothetical protein singleton unknown function unknown function 1 30159 30281
ASU02400.1 MF431736_p37 ATP-dependent Clp protease proteolytic subunit phrog_1827 ATP-dependent protease other -1 22473 23072
ASU02419.1 MF431736_p56 hypothetical protein phrog_32148 unknown function unknown function -1 31138 31380
ASU02378.1 MF431736_p15 hypothetical protein phrog_5271 unknown function unknown function -1 10578 11189
ASU02395.1 MF431736_p32 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 19467 19757
ASU02365.1 MF431736_p2 hypothetical protein phrog_4576 unknown function unknown function -1 831 1223
ASU02445.1 MF431736_p82 hypothetical protein phrog_1479 unknown function unknown function -1 44915 45232
ASU02406.1 MF431736_p43 hypothetical protein phrog_5792 unknown function unknown function -1 26133 26429
ASU02487.1 MF431736_p124 DNA helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 78214 79560
ASU02412.1 MF431736_p49 hypothetical protein singleton unknown function unknown function -1 28108 28224
ASU02423.1 MF431736_p60 hypothetical protein phrog_13931 unknown function unknown function -1 32953 33096
ASU02390.1 MF431736_p27 hypothetical protein phrog_4979 unknown function unknown function -1 16012 16443
ASU02473.1 MF431736_p110 hypothetical protein phrog_2502 unknown function unknown function 1 63148 63543
ASU02401.1 MF431736_p38 deoxynucleotide monophosphate kinase phrog_139 deoxynucleoside monophosphate kinase other -1 23085 23837
ASU02383.1 MF431736_p20 hypothetical protein phrog_4215 unknown function unknown function -1 13140 13607
ASU02462.1 MF431736_p99 phosphate starvation-inducible protein phrog_170 PhoH-like phosphate starvation-inducible other -1 56452 57204
ASU02431.1 MF431736_p68 hypothetical protein phrog_5153 unknown function unknown function -1 37245 37451
ASU02475.1 MF431736_p112 hypothetical protein phrog_3611 helicase DNA, RNA and nucleotide metabolism 1 67235 67939
ASU02453.1 MF431736_p90 ribonuclease HI phrog_531 Rnase H DNA, RNA and nucleotide metabolism -1 48838 49314
ASU02441.1 MF431736_p78 hypothetical protein phrog_11609 unknown function unknown function -1 42580 42780
ASU02467.1 MF431736_p104 hypothetical protein phrog_5827 unknown function unknown function 1 60799 61044
ASU02496.1 MF431736_p133 tail fibers protein phrog_5481 tail fiber protein tail -1 86315 89242
AVG19475.1 MF431736_p161 hypothetical protein phrog_3747 unknown function unknown function -1 117618 117869
ASU02402.1 MF431736_p39 hypothetical protein phrog_739 Rz-like spanin lysis -1 24121 24564
ASU02511.1 MF431736_p148 neck whiskers protein phrog_2973 Hoc-like head decoration head and packaging -1 106114 106596
ASU02485.1 MF431736_p122 DNA primase/helicase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 74207 75097
AVG19481.1 MF431736_p167 hypothetical protein phrog_3474 unknown function unknown function 1 120701 120898
ASU02480.1 MF431736_p117 hypothetical protein phrog_8267 unknown function unknown function 1 69755 69949
ASU02477.1 MF431736_p114 hypothetical protein phrog_1725 DNA binding protein DNA, RNA and nucleotide metabolism 1 68294 68704
ASU02516.1 MF431736_p153 receptor-binding protein phrog_4815 receptor binding tail protein tail -1 110171 111952
AVG19470.1 MF431736_p156 deoxynucleoside-5'-monophosphatase phrog_415 polynucleotide kinase other -1 113278 114012
AVG19472.1 MF431736_p158 hypothetical protein phrog_38619 unknown function unknown function -1 114525 114686
ASU02501.1 MF431736_p138 tail length tape-measure protein phrog_3779 tail length tape measure protein tail -1 95297 99004
ASU02484.1 MF431736_p121 hypothetical protein phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 72744 74210
AVG19477.1 MF431736_p163 hypothetical protein phrog_23458 unknown function unknown function 1 119365 119478
ASU02430.1 MF431736_p67 hypothetical protein phrog_4551 unknown function unknown function -1 36880 37155
ASU02407.1 MF431736_p44 hypothetical protein phrog_5486 unknown function unknown function -1 26383 26802
ASU02366.1 MF431736_p3 hypothetical protein phrog_38619 unknown function unknown function -1 1256 1417
ASU02425.1 MF431736_p62 hypothetical protein phrog_6221 unknown function unknown function -1 33512 33676
ASU02456.1 MF431736_p93 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism -1 50620 51474
ASU02498.1 MF431736_p135 tail fibers protein phrog_3890 straight fibre tail protein tail -1 89670 91727
AVG19473.1 MF431736_p159 A1 protein phrog_1745 DNA transfer protein other -1 114856 116520
ASU02403.1 MF431736_p40 hypothetical protein phrog_4243 unknown function unknown function -1 24561 25241
ASU02452.1 MF431736_p89 hypothetical protein phrog_4593 unknown function unknown function -1 48483 48761
ASU02489.1 MF431736_p126 hypothetical protein phrog_1607 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 80613 81386
AVG19471.1 MF431736_p157 hypothetical protein phrog_4576 unknown function unknown function -1 114100 114492
ASU02409.1 MF431736_p46 hypothetical protein phrog_2855 unknown function unknown function -1 27087 27368
ASU02437.1 MF431736_p74 hypothetical protein phrog_6894 unknown function unknown function -1 39214 39510
AVG19476.1 MF431736_p162 hypothetical protein phrog_21018 unknown function unknown function -1 118240 118398
ASU02457.1 MF431736_p94 dihydrofolate reductase phrog_316 dihydrofolate reductase DNA, RNA and nucleotide metabolism -1 51474 52001
ASU02470.1 MF431736_p107 hypothetical protein phrog_11166 unknown function unknown function 1 62032 62214
ASU02372.1 MF431736_p9 hypothetical protein phrog_5145 unknown function unknown function 1 6329 6556
ASU02392.1 MF431736_p29 hypothetical protein phrog_7810 unknown function unknown function -1 17587 17955
ASU02386.1 MF431736_p23 hypothetical protein phrog_4804 unknown function unknown function -1 14227 14472
ASU02370.1 MF431736_p7 hypothetical protein phrog_21018 unknown function unknown function -1 4971 5129
ASU02397.1 MF431736_p34 hypothetical protein phrog_4328 unknown function unknown function -1 20274 20681
ASU02449.1 MF431736_p86 hypothetical protein phrog_4586 unknown function unknown function -1 47353 47565
ASU02451.1 MF431736_p88 hypothetical protein phrog_4516 unknown function unknown function -1 47884 48399
ASU02478.1 MF431736_p115 hypothetical protein phrog_3696 unknown function unknown function 1 68741 69037
ASU02455.1 MF431736_p92 hypothetical protein phrog_1040 peptidase HslV family other -1 49586 50164
ASU02369.1 MF431736_p6 hypothetical protein phrog_3747 unknown function unknown function -1 4349 4600
ASU02411.1 MF431736_p48 hypothetical protein phrog_1235 unknown function unknown function -1 27858 28043
ASU02394.1 MF431736_p31 homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 18886 19407
ASU02469.1 MF431736_p106 hypothetical protein phrog_5116 unknown function unknown function 1 61866 62048
ASU02507.1 MF431736_p144 hypothetical protein phrog_3725 tail completion or Neck1 protein connector -1 102745 103512
ASU02464.1 MF431736_p101 hypothetical protein phrog_681 endonuclease DNA, RNA and nucleotide metabolism 1 59519 60205
ASU02503.1 MF431736_p140 hypothetical protein phrog_313 Tail assembly chaperone tail -1 99515 99919
ASU02472.1 MF431736_p109 hypothetical protein phrog_2502 unknown function unknown function 1 62710 63138
ASU02387.1 MF431736_p24 hypothetical protein phrog_4984 unknown function unknown function -1 14469 14750
ASU02385.1 MF431736_p22 hypothetical protein phrog_4731 unknown function unknown function -1 13905 14237
ASU02435.1 MF431736_p72 hypothetical protein phrog_10617 unknown function unknown function -1 38222 38410
ASU02499.1 MF431736_p136 tail length tape-measure protein phrog_31 central tail fiber J tail -1 91728 94577
ASU02488.1 MF431736_p125 homing endonuclease phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 79562 80092