| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF472892 |
Definition |
Mycobacterium phage TreyKay, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus. |
DB of origin |
NUCCORE |
Length |
60311 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
97 |
%GC |
66.77 |
Number of singletons |
3 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASZ75093.1 | MF472892_p22 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 17122 | 18888 |
| ASZ75133.1 | MF472892_p63 | hypothetical protein | phrog_9435 | unknown function | unknown function | 1 | 42606 | 43085 |
| ASZ75132.1 | MF472892_p62 | hypothetical protein | phrog_3492 | unknown function | unknown function | 1 | 42358 | 42552 |
| ASZ75074.1 | MF472892_p3 | hypothetical protein | phrog_2074 | unknown function | unknown function | 1 | 452 | 706 |
| ASZ75089.1 | MF472892_p19 | tail assembly chaperone | phrog_1861 | unknown function | unknown function | 1 | 11196 | 11636 |
| ASZ75144.1 | MF472892_p74 | hypothetical protein | phrog_3478 | unknown function | unknown function | 1 | 48778 | 49239 |
| ASZ75094.1 | MF472892_p23 | minor tail protein | phrog_1697 | minor tail protein | tail | 1 | 18888 | 19364 |
| ASZ75129.1 | MF472892_p59 | hypothetical protein | phrog_2870 | unknown function | unknown function | 1 | 41005 | 41325 |
| ASZ75072.1 | MF472892_p1 | hypothetical protein | phrog_4624 | unknown function | unknown function | 1 | 79 | 273 |
| ASZ75097.1 | MF472892_p26 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 20846 | 23278 |
| ASZ75125.1 | MF472892_p55 | hypothetical protein | phrog_1956 | unknown function | unknown function | 1 | 39702 | 39980 |
| ASZ75112.1 | MF472892_p41 | integrase | phrog_1 | integrase | integration and excision | 1 | 32665 | 33753 |
| ASZ75073.1 | MF472892_p2 | hypothetical protein | phrog_5284 | unknown function | unknown function | 1 | 270 | 455 |
| ASZ75117.1 | MF472892_p47 | hypothetical protein | phrog_2654 | unknown function | unknown function | 1 | 36395 | 36562 |
| ASZ75081.1 | MF472892_p10 | hypothetical protein | phrog_1757 | unknown function | unknown function | 1 | 7060 | 7245 |
| ASZ75090.1 | MF472892_p18 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 11196 | 12046 |
| ASZ75115.1 | MF472892_p44 | hypothetical protein | phrog_1702 | transcriptional repressor | transcription regulation | 1 | 35343 | 35582 |
| ASZ75134.1 | MF472892_p64 | hypothetical protein | phrog_1581 | unknown function | unknown function | 1 | 43082 | 43297 |
| ASZ75139.1 | MF472892_p69 | DNA primase/polymerase | phrog_2478 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 44765 | 47383 |
| ASZ75091.1 | MF472892_p20 | tape measure protein | phrog_971 | endolysin | lysis | 1 | 12047 | 15883 |
| ASZ75107.1 | MF472892_p36 | hypothetical protein | phrog_4112 | unknown function | unknown function | 1 | 30152 | 30430 |
| ASZ75114.1 | MF472892_p43 | immunity repressor | phrog_1746 | transcriptional repressor | transcription regulation | -1 | 34787 | 35164 |
| ASZ75153.1 | MF472892_p83 | hypothetical protein | phrog_5135 | unknown function | unknown function | 1 | 53449 | 53814 |
| ASZ75120.1 | MF472892_p50 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 37556 | 37819 |
| ASZ75146.1 | MF472892_p76 | hypothetical protein | phrog_4269 | unknown function | unknown function | 1 | 50348 | 50581 |
| ASZ75149.1 | MF472892_p79 | hypothetical protein | phrog_2974 | unknown function | unknown function | 1 | 51505 | 51783 |
| ASZ75135.1 | MF472892_p65 | hypothetical protein | phrog_2388 | unknown function | unknown function | 1 | 43297 | 43416 |
| ASZ75078.1 | MF472892_p7 | terminase | phrog_2 | terminase large subunit | head and packaging | 1 | 1562 | 2983 |
| ASZ75087.1 | MF472892_p16 | head-to-tail connector | phrog_123 | tail terminator | connector | 1 | 9943 | 10368 |
| ASZ75103.1 | MF472892_p32 | hypothetical protein | phrog_3413 | unknown function | unknown function | 1 | 27747 | 28088 |
| ASZ75098.1 | MF472892_p27 | minor tail protein | phrog_416 | minor tail protein | tail | 1 | 23290 | 24303 |
| ASZ75158.1 | MF472892_p88 | hypothetical protein | phrog_2822 | unknown function | unknown function | 1 | 55920 | 56471 |
| ASZ75119.1 | MF472892_p49 | helix-turn-helix DNA binding protein | phrog_2286 | unknown function | unknown function | 1 | 36768 | 37559 |
| ASZ75100.1 | MF472892_p29 | lysin A | phrog_1519 | endolysin | lysis | 1 | 24775 | 26430 |
| ASZ75143.1 | MF472892_p73 | hypothetical protein | phrog_20209 | unknown function | unknown function | 1 | 48480 | 48785 |
| ASZ75168.1 | MF472892_p45 | helix-turn-helix DNA binding protein | phrog_1840 | excisionase | integration and excision | 1 | 35579 | 35869 |
| ASZ75136.1 | MF472892_p66 | hypothetical protein | phrog_1911 | unknown function | unknown function | 1 | 43499 | 44008 |
| ASZ75164.1 | MF472892_p94 | hypothetical protein | phrog_4560 | unknown function | unknown function | 1 | 58903 | 59172 |
| ASZ75160.1 | MF472892_p90 | hypothetical protein | phrog_3665 | unknown function | unknown function | 1 | 57030 | 57191 |
| ASZ75077.1 | MF472892_p6 | hypothetical protein | phrog_1459 | terminase small subunit | head and packaging | 1 | 1351 | 1578 |
| ASZ75150.1 | MF472892_p80 | hypothetical protein | phrog_5776 | unknown function | unknown function | 1 | 51871 | 52002 |
| ASZ75121.1 | MF472892_p51 | hypothetical protein | phrog_2781 | unknown function | unknown function | 1 | 37816 | 38760 |
| ASZ75088.1 | MF472892_p17 | major tail protein | phrog_117 | major tail protein | tail | 1 | 10468 | 11082 |
| ASZ75096.1 | MF472892_p25 | minor tail protein | phrog_1736 | minor tail protein | tail | 1 | 20537 | 20845 |
| ASZ75128.1 | MF472892_p58 | hypothetical protein | phrog_2596 | unknown function | unknown function | 1 | 40742 | 41008 |
| ASZ75154.1 | MF472892_p84 | hypothetical protein | phrog_666 | unknown function | unknown function | 1 | 53829 | 54005 |
| ASZ75162.1 | MF472892_p92 | hypothetical protein | phrog_5243 | unknown function | unknown function | 1 | 58221 | 58418 |
| ASZ75084.1 | MF472892_p13 | head-to-tail connector | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 8945 | 9331 |
| ASZ75102.1 | MF472892_p31 | holin | phrog_565 | holin | lysis | 1 | 27310 | 27750 |
| ASZ75104.1 | MF472892_p33 | hypothetical protein | phrog_1738 | unknown function | unknown function | 1 | 28085 | 28336 |
| ASZ75086.1 | MF472892_p15 | head-to-tail connector | phrog_387 | neck protein | connector | 1 | 9665 | 9946 |
| ASZ75167.1 | MF472892_p97 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 59952 | 60254 |
| ASZ75166.1 | MF472892_p96 | hypothetical protein | phrog_5633 | unknown function | unknown function | 1 | 59821 | 59955 |
| ASZ75079.1 | MF472892_p8 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2995 | 4548 |
| ASZ75099.1 | MF472892_p28 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 24385 | 24756 |
| ASZ75123.1 | MF472892_p53 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 38974 | 39324 |
| ASZ75142.1 | MF472892_p72 | resolvase | phrog_3055 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 47792 | 48487 |
| ASZ75106.1 | MF472892_p35 | hypothetical protein | phrog_2311 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 29724 | 30155 |
| ASZ75113.1 | MF472892_p42 | membrane protein | phrog_950 | unknown function | unknown function | -1 | 33857 | 34696 |
| ASZ75151.1 | MF472892_p81 | hypothetical protein | phrog_2342 | unknown function | unknown function | 1 | 51999 | 52892 |
| ASZ75118.1 | MF472892_p48 | hypothetical protein | phrog_3903 | unknown function | unknown function | 1 | 36556 | 36771 |
| ASZ75157.1 | MF472892_p87 | hypothetical protein | phrog_3167 | unknown function | unknown function | 1 | 55537 | 55920 |
| ASZ75147.1 | MF472892_p77 | hypothetical protein | phrog_1338 | unknown function | unknown function | 1 | 50578 | 50853 |
| ASZ75145.1 | MF472892_p75 | helix-turn-helix domain protein | phrog_908 | unknown function | unknown function | 1 | 49236 | 50336 |
| ASZ75141.1 | MF472892_p71 | hypothetical protein | singleton | unknown function | unknown function | 1 | 47576 | 47704 |
| ASZ75152.1 | MF472892_p82 | hypothetical protein | phrog_3868 | unknown function | unknown function | 1 | 52889 | 53455 |
| ASZ75140.1 | MF472892_p70 | hypothetical protein | singleton | unknown function | unknown function | 1 | 47391 | 47528 |
| ASZ75156.1 | MF472892_p86 | RNA ligase | phrog_1075 | tRNA splicing ligase | DNA, RNA and nucleotide metabolism | 1 | 54350 | 55537 |
| ASZ75095.1 | MF472892_p24 | minor tail protein | phrog_1565 | minor tail protein | tail | 1 | 19448 | 20530 |
| ASZ75127.1 | MF472892_p57 | exonuclease | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 40200 | 40742 |
| ASZ75108.1 | MF472892_p37 | hypothetical protein | phrog_7081 | unknown function | unknown function | 1 | 30506 | 30904 |
| ASZ75082.1 | MF472892_p11 | scaffolding protein | phrog_1793 | head scaffolding protein | head and packaging | 1 | 7280 | 7822 |
| ASZ75159.1 | MF472892_p89 | hypothetical protein | phrog_2493 | unknown function | unknown function | 1 | 56464 | 57033 |
| ASZ75126.1 | MF472892_p56 | hypothetical protein | phrog_4832 | unknown function | unknown function | 1 | 39977 | 40177 |
| ASZ75101.1 | MF472892_p30 | lysin B | phrog_102 | endolysin | lysis | 1 | 26427 | 27299 |
| ASZ75111.1 | MF472892_p40 | hypothetical protein | singleton | unknown function | unknown function | -1 | 32374 | 32523 |
| ASZ75092.1 | MF472892_p21 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 15985 | 17121 |
| ASZ75138.1 | MF472892_p68 | HNH endonuclease | phrog_1571 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44352 | 44723 |
| ASZ75161.1 | MF472892_p91 | hypothetical protein | phrog_5812 | unknown function | unknown function | 1 | 57362 | 58189 |
| ASZ75110.1 | MF472892_p39 | hypothetical protein | phrog_658 | unknown function | unknown function | -1 | 32005 | 32307 |
| ASZ75075.1 | MF472892_p4 | hypothetical protein | phrog_2293 | unknown function | unknown function | 1 | 703 | 930 |
| ASZ75085.1 | MF472892_p14 | head-to-tail connector | phrog_763 | head-tail adaptor | connector | 1 | 9328 | 9684 |
| ASZ75109.1 | MF472892_p38 | queuine tRNA-ribosyltransferase | phrog_1279 | queuine tRNA-ribosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 31008 | 31940 |
| ASZ75080.1 | MF472892_p9 | capsid maturation protein | phrog_1752 | head maturation protease | head and packaging | 1 | 4553 | 7063 |
| ASZ75137.1 | MF472892_p67 | hypothetical protein | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 44110 | 44352 |
| ASZ75155.1 | MF472892_p85 | hypothetical protein | phrog_6426 | unknown function | unknown function | 1 | 54002 | 54235 |
| ASZ75163.1 | MF472892_p93 | hypothetical protein | phrog_353 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 58539 | 58754 |
| ASZ75165.1 | MF472892_p95 | hypothetical protein | phrog_4561 | unknown function | unknown function | 1 | 59546 | 59776 |
| ASZ75148.1 | MF472892_p78 | protease | phrog_1006 | unknown function | unknown function | 1 | 50926 | 51387 |
| ASZ75105.1 | MF472892_p34 | exonuclease | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 28323 | 29531 |
| ASZ75116.1 | MF472892_p46 | hypothetical protein | phrog_2908 | unknown function | unknown function | 1 | 35871 | 36221 |
| ASZ75130.1 | MF472892_p60 | hypothetical protein | phrog_1498 | unknown function | unknown function | 1 | 41322 | 41486 |
| ASZ75124.1 | MF472892_p54 | hypothetical protein | phrog_3186 | unknown function | unknown function | 1 | 39321 | 39701 |
| ASZ75122.1 | MF472892_p52 | hypothetical protein | phrog_542 | unknown function | unknown function | 1 | 38772 | 38942 |
| ASZ75083.1 | MF472892_p12 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 7898 | 8833 |
| ASZ75131.1 | MF472892_p61 | hypothetical protein | phrog_1674 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 41483 | 42361 |
| ASZ75076.1 | MF472892_p5 | hypothetical protein | phrog_2622 | unknown function | unknown function | 1 | 1155 | 1358 |