| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF472894 |
Definition |
Mycobacterium phage Majeke, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus; unclassified Fishburnevirus. |
DB of origin |
NUCCORE |
Length |
47612 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
81 |
%GC |
67.36 |
Number of singletons |
0 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASZ75302.1 | MF472894_p42 | hypothetical protein | phrog_5559 | unknown function | unknown function | 1 | 31122 | 31301 |
| ASZ75285.1 | MF472894_p25 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 22882 | 23055 |
| ASZ75321.1 | MF472894_p62 | hypothetical protein | phrog_5921 | unknown function | unknown function | 1 | 39052 | 39204 |
| ASZ75335.1 | MF472894_p77 | hypothetical protein | phrog_4738 | transcriptional repressor | transcription regulation | 1 | 45705 | 45878 |
| ASZ75332.1 | MF472894_p73 | hypothetical protein | phrog_7429 | unknown function | unknown function | 1 | 44736 | 44948 |
| ASZ75297.1 | MF472894_p37 | hypothetical protein | phrog_5015 | unknown function | unknown function | 1 | 29381 | 29782 |
| ASZ75295.1 | MF472894_p35 | hypothetical protein | phrog_3507 | unknown function | unknown function | 1 | 28840 | 29139 |
| ASZ75337.1 | MF472894_p79 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 46412 | 46780 |
| ASZ75327.1 | MF472894_p68 | helix-turn-helix DNA binding domain protein | phrog_908 | unknown function | unknown function | 1 | 42487 | 43389 |
| ASZ75275.1 | MF472894_p16 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 9932 | 10531 |
| ASZ75276.1 | MF472894_p15 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 9932 | 10850 |
| ASZ75277.1 | MF472894_p17 | tape measure protein | phrog_2337 | tail length tape measure protein | tail | 1 | 10864 | 14649 |
| ASZ75322.1 | MF472894_p63 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 39197 | 40675 |
| ASZ75280.1 | MF472894_p20 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 18150 | 19043 |
| ASZ75323.1 | MF472894_p64 | hypothetical protein | phrog_2451 | unknown function | unknown function | 1 | 40672 | 40806 |
| ASZ75294.1 | MF472894_p34 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 27977 | 28843 |
| ASZ75301.1 | MF472894_p41 | hypothetical protein | phrog_5803 | unknown function | unknown function | 1 | 30853 | 31125 |
| ASZ75304.1 | MF472894_p44 | hypothetical protein | phrog_11260 | unknown function | unknown function | 1 | 31390 | 31512 |
| ASZ75312.1 | MF472894_p52 | hypothetical protein | phrog_3821 | unknown function | unknown function | 1 | 35651 | 35935 |
| ASZ75290.1 | MF472894_p30 | integrase | phrog_1 | integrase | integration and excision | -1 | 25924 | 26913 |
| ASZ75310.1 | MF472894_p50 | RusA-like DNA endonuclease | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 34918 | 35418 |
| ASZ75268.1 | MF472894_p8 | head-to-tail connector complex protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 6594 | 6956 |
| ASZ75273.1 | MF472894_p13 | head-to-tail connector complex protein | phrog_813 | head-tail adaptor | connector | 1 | 8287 | 8724 |
| ASZ75328.1 | MF472894_p69 | hypothetical protein | phrog_16825 | unknown function | unknown function | 1 | 43386 | 43646 |
| ASZ75267.1 | MF472894_p7 | hypothetical protein | phrog_2322 | head-tail connector protein | connector | 1 | 6243 | 6590 |
| ASZ75319.1 | MF472894_p60 | hypothetical protein | phrog_17383 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 38155 | 38394 |
| ASZ75296.1 | MF472894_p36 | hypothetical protein | phrog_9041 | unknown function | unknown function | 1 | 29136 | 29384 |
| ASZ75289.1 | MF472894_p29 | hypothetical protein | phrog_404 | minor tail protein | tail | 1 | 25491 | 25850 |
| ASZ75313.1 | MF472894_p53 | hypothetical protein | phrog_4899 | unknown function | unknown function | 1 | 35932 | 36489 |
| ASZ75281.1 | MF472894_p21 | minor tail protein | phrog_3493 | minor tail protein | tail | 1 | 19044 | 21305 |
| ASZ75338.1 | MF472894_p80 | hypothetical protein | phrog_7285 | unknown function | unknown function | 1 | 46767 | 47015 |
| ASZ75269.1 | MF472894_p9 | head-to-tail connector complex protein | phrog_6553 | head closure Hc1 | connector | 1 | 6956 | 7306 |
| ASZ75329.1 | MF472894_p70 | hypothetical protein | phrog_2074 | unknown function | unknown function | 1 | 43651 | 43905 |
| ASZ75309.1 | MF472894_p49 | FtsK-like DNA translocase | phrog_6152 | unknown function | unknown function | 1 | 33851 | 34918 |
| ASZ75293.1 | MF472894_p33 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 27744 | 27980 |
| ASZ75284.1 | MF472894_p24 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 22523 | 22885 |
| ASZ75263.1 | MF472894_p3 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 2106 | 3569 |
| ASZ75320.1 | MF472894_p61 | helix-turn-helix DNA binding protein | phrog_7170 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 38391 | 39059 |
| ASZ75298.1 | MF472894_p38 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 29845 | 30351 |
| ASZ75308.1 | MF472894_p48 | hypothetical protein | phrog_4387 | unknown function | unknown function | 1 | 33573 | 33854 |
| ASZ75330.1 | MF472894_p71 | hypothetical protein | phrog_10505 | unknown function | unknown function | 1 | 43905 | 44087 |
| ASZ75326.1 | MF472894_p67 | hypothetical protein | phrog_7254 | unknown function | unknown function | 1 | 42221 | 42490 |
| ASZ75317.1 | MF472894_p58 | hypothetical protein | phrog_2001 | unknown function | unknown function | 1 | 37716 | 37838 |
| ASZ75265.1 | MF472894_p5 | scaffolding protein | phrog_673 | head scaffolding protein | head and packaging | 1 | 4896 | 5261 |
| ASZ75331.1 | MF472894_p72 | hypothetical protein | phrog_5855 | unknown function | unknown function | 1 | 44160 | 44660 |
| ASZ75270.1 | MF472894_p10 | hypothetical protein | phrog_2322 | head-tail connector protein | connector | 1 | 7321 | 7644 |
| ASZ75311.1 | MF472894_p51 | hypothetical protein | phrog_6109 | unknown function | unknown function | 1 | 35412 | 35654 |
| ASZ75325.1 | MF472894_p66 | hypothetical protein | phrog_3599 | unknown function | unknown function | 1 | 41694 | 42224 |
| ASZ75318.1 | MF472894_p59 | hypothetical protein | phrog_2060 | DNA methyltransferase | other | 1 | 37835 | 38158 |
| ASZ75274.1 | MF472894_p14 | major tail protein | phrog_476 | major tail protein | tail | 1 | 8818 | 9816 |
| ASZ75336.1 | MF472894_p78 | hypothetical protein | phrog_6617 | unknown function | unknown function | 1 | 46077 | 46415 |
| ASZ75271.1 | MF472894_p11 | hypothetical protein | phrog_4307 | unknown function | unknown function | 1 | 7644 | 7913 |
| ASZ75314.1 | MF472894_p54 | hypothetical protein | phrog_15826 | unknown function | unknown function | 1 | 36482 | 37093 |
| ASZ75341.1 | MF472894_p75 | hypothetical protein | phrog_4550 | unknown function | unknown function | 1 | 45335 | 45508 |
| ASZ75306.1 | MF472894_p46 | exonuclease | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 31658 | 32587 |
| ASZ75334.1 | MF472894_p76 | hypothetical protein | phrog_10254 | unknown function | unknown function | 1 | 45505 | 45696 |
| ASZ75291.1 | MF472894_p31 | immunity repressor | phrog_2328 | transcriptional repressor | transcription regulation | -1 | 26984 | 27385 |
| ASZ75324.1 | MF472894_p65 | helix-turn-helix DNA binding protein | phrog_1408 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 40807 | 41697 |
| ASZ75315.1 | MF472894_p55 | hypothetical protein | phrog_7871 | unknown function | unknown function | -1 | 37099 | 37272 |
| ASZ75303.1 | MF472894_p43 | hypothetical protein | phrog_5806 | unknown function | unknown function | 1 | 31298 | 31429 |
| ASZ75288.1 | MF472894_p28 | holin | phrog_443 | holin | lysis | 1 | 25246 | 25494 |
| ASZ75316.1 | MF472894_p57 | hypothetical protein | phrog_6718 | unknown function | unknown function | -1 | 37426 | 37632 |
| ASZ75286.1 | MF472894_p26 | lysin A | phrog_6707 | endolysin | lysis | 1 | 23126 | 24061 |
| ASZ75264.1 | MF472894_p4 | capsid maturation protease | phrog_2976 | head maturation protease | head and packaging | 1 | 3560 | 4894 |
| ASZ75339.1 | MF472894_p81 | HNH endonuclease | phrog_1808 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 47020 | 47403 |
| ASZ75333.1 | MF472894_p74 | hypothetical protein | phrog_2202 | unknown function | unknown function | 1 | 45012 | 45338 |
| ASZ75300.1 | MF472894_p40 | hypothetical protein | phrog_4981 | unknown function | unknown function | 1 | 30581 | 30856 |
| ASZ75307.1 | MF472894_p47 | ssDNA binding protein | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 32584 | 33576 |
| ASZ75261.1 | MF472894_p1 | terminase small subunit | phrog_1496 | terminase small subunit | head and packaging | 1 | 55 | 444 |
| ASZ75262.1 | MF472894_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 413 | 2089 |
| ASZ75292.1 | MF472894_p32 | helix-turn-helix DNA binding protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 27502 | 27747 |
| ASZ75287.1 | MF472894_p27 | lysin B | phrog_102 | endolysin | lysis | 1 | 24058 | 25224 |
| ASZ75279.1 | MF472894_p19 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 16391 | 18127 |
| ASZ75266.1 | MF472894_p6 | major capsid protein | phrog_1650 | major head protein | head and packaging | 1 | 5299 | 6243 |
| ASZ75283.1 | MF472894_p23 | hypothetical protein | phrog_6374 | unknown function | unknown function | 1 | 22357 | 22506 |
| ASZ75272.1 | MF472894_p12 | hypothetical protein | phrog_2325 | minor tail protein | tail | 1 | 7913 | 8290 |
| ASZ75278.1 | MF472894_p18 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 14646 | 16391 |
| ASZ75305.1 | MF472894_p45 | hypothetical protein | phrog_4702 | unknown function | unknown function | 1 | 31509 | 31661 |
| ASZ75282.1 | MF472894_p22 | hypothetical protein | phrog_416 | minor tail protein | tail | 1 | 21305 | 22342 |
| ASZ75340.1 | MF472894_p56 | helix-turn-helix DNA binding protein | phrog_6506 | Arc-like repressor | transcription regulation | -1 | 37278 | 37433 |
| ASZ75299.1 | MF472894_p39 | hypothetical protein | phrog_4656 | unknown function | unknown function | 1 | 30351 | 30584 |