Genomic map of Mycobacterium phage JoshKayV (MF472896)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF472896
Definition
Mycobacterium phage JoshKayV, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
53366
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
97
%GC
63
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASZ75435.1 MF472896_p95 hypothetical protein phrog_1392 unknown function unknown function -1 51029 51739
ASZ75394.1 MF472896_p53 hypothetical protein phrog_2046 unknown function unknown function -1 36364 36567
ASZ75352.1 MF472896_p11 holin phrog_526 holin lysis 1 6385 6825
ASZ75378.1 MF472896_p37 excise phrog_66 excisionase and transcriptional regulator integration and excision -1 28065 28235
ASZ75362.1 MF472896_p21 head-to-tail connector phrog_320 head closure Hc1 connector 1 14362 14730
ASZ75426.1 MF472896_p86 hypothetical protein phrog_855 unknown function unknown function -1 48952 49086
ASZ75419.1 MF472896_p79 hypothetical protein phrog_8490 unknown function unknown function -1 46850 46990
ASZ75344.1 MF472896_p3 VIP2 toxin phrog_3895 ADP-ribosyltransferase exoenzyme toxin moron, auxiliary metabolic gene and host takeover 1 1332 2264
ASZ75405.1 MF472896_p65 helix-turn-helix DNA binding protein phrog_1123 unknown function unknown function -1 41295 41552
ASZ75390.1 MF472896_p49 hypothetical protein phrog_690 unknown function unknown function -1 32752 32961
ASZ75354.1 MF472896_p13 terminase phrog_9 terminase large subunit head and packaging 1 7836 9626
ASZ75351.1 MF472896_p10 lysin A phrog_317 endolysin lysis 1 5075 6388
ASZ75345.1 MF472896_p4 hypothetical protein phrog_4491 unknown function unknown function 1 2261 2566
ASZ75434.1 MF472896_p94 hypothetical protein phrog_6255 unknown function unknown function -1 50772 51020
ASZ75438.1 MF472896_p61 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 39365 39766
ASZ75380.1 MF472896_p39 hypothetical protein phrog_542 unknown function unknown function -1 28432 28605
ASZ75428.1 MF472896_p88 hypothetical protein phrog_9713 unknown function unknown function -1 49390 49464
ASZ75366.1 MF472896_p26 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 16204 16611
ASZ75427.1 MF472896_p87 hypothetical protein phrog_3718 unknown function unknown function -1 49097 49393
ASZ75355.1 MF472896_p14 portal protein phrog_104 portal protein head and packaging 1 9626 11101
ASZ75383.1 MF472896_p42 hypothetical protein phrog_3771 unknown function unknown function -1 29245 29529
ASZ75402.1 MF472896_p62 hypothetical protein phrog_1370 unknown function unknown function -1 39744 39875
ASZ75412.1 MF472896_p72 hypothetical protein phrog_642 unknown function unknown function -1 43661 43858
ASZ75367.1 MF472896_p25 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 16204 17036
ASZ75399.1 MF472896_p58 hypothetical protein phrog_1167 phosphofructokinase other -1 38325 38828
ASZ75384.1 MF472896_p43 hypothetical protein phrog_3283 unknown function unknown function -1 29529 29756
ASZ75377.1 MF472896_p36 hypothetical protein phrog_549 unknown function unknown function 1 27589 27972
ASZ75382.1 MF472896_p41 hypothetical protein phrog_2099 unknown function unknown function -1 28982 29245
ASZ75407.1 MF472896_p67 hypothetical protein phrog_5101 unknown function unknown function -1 41919 42218
ASZ75395.1 MF472896_p54 hypothetical protein phrog_499 unknown function unknown function -1 36564 36737
ASZ75410.1 MF472896_p70 hypothetical protein phrog_520 unknown function unknown function -1 43202 43441
ASZ75422.1 MF472896_p82 hypothetical protein phrog_3351 unknown function unknown function -1 47525 47758
ASZ75420.1 MF472896_p80 hypothetical protein phrog_1178 unknown function unknown function -1 46987 47259
ASZ75358.1 MF472896_p17 major capsid protein phrog_10 major head protein head and packaging 1 12589 13545
ASZ75346.1 MF472896_p5 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2563 2859
ASZ75432.1 MF472896_p92 hypothetical protein phrog_519 unknown function unknown function -1 50411 50578
ASZ75437.1 MF472896_p97 hypothetical protein phrog_1676 unknown function unknown function -1 51846 52139
ASZ75411.1 MF472896_p71 hypothetical protein phrog_666 unknown function unknown function -1 43470 43664
ASZ75381.1 MF472896_p40 hypothetical protein phrog_383 unknown function unknown function -1 28602 28985
ASZ75343.1 MF472896_p2 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 661 1428
ASZ75414.1 MF472896_p74 hypothetical protein phrog_1562 unknown function unknown function -1 44811 45230
ASZ75429.1 MF472896_p89 hypothetical protein phrog_2355 unknown function unknown function -1 49461 49922
ASZ75368.1 MF472896_p27 tape measure protein phrog_305 tail length tape measure protein tail 1 17026 19569
ASZ75436.1 MF472896_p96 hypothetical protein phrog_1445 unknown function unknown function -1 51739 51822
ASZ75386.1 MF472896_p45 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 30005 31792
ASZ75408.1 MF472896_p68 DnaB-like helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 42252 43058
ASZ75357.1 MF472896_p16 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 12035 12559
ASZ75403.1 MF472896_p63 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 39901 40374
ASZ75413.1 MF472896_p73 RecB family endonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 43909 44814
ASZ75349.1 MF472896_p8 hypothetical protein phrog_5972 unknown function unknown function 1 4521 4775
ASZ75392.1 MF472896_p51 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 33765 34313
ASZ75347.1 MF472896_p6 hypothetical protein phrog_226 minor tail protein tail 1 2899 3369
ASZ75370.1 MF472896_p29 minor tail protein phrog_110 minor tail protein tail 1 20603 22375
ASZ75379.1 MF472896_p38 hypothetical protein phrog_9463 unknown function unknown function -1 28235 28432
ASZ75371.1 MF472896_p30 minor tail protein phrog_352 minor tail protein tail 1 22392 22838
ASZ75433.1 MF472896_p93 hypothetical protein phrog_1946 unknown function unknown function -1 50575 50772
ASZ75369.1 MF472896_p28 minor tail protein phrog_106 minor tail protein tail 1 19590 20606
ASZ75421.1 MF472896_p81 hypothetical protein phrog_1875 unknown function unknown function -1 47256 47528
ASZ75373.1 MF472896_p32 minor tail protein phrog_737 minor tail protein tail 1 23180 25381
ASZ75396.1 MF472896_p55 helix-turn-helix DNA binding protein phrog_354 sigma-K factor transcription regulation -1 36737 37405
ASZ75417.1 MF472896_p77 hypothetical protein phrog_4294 unknown function unknown function -1 46427 46588
ASZ75374.1 MF472896_p33 hypothetical protein phrog_13711 unknown function unknown function 1 25432 25602
ASZ75400.1 MF472896_p59 hypothetical protein singleton unknown function unknown function -1 38825 38905
ASZ75375.1 MF472896_p34 integrase phrog_1 integrase integration and excision -1 25599 26714
ASZ75401.1 MF472896_p60 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 38905 39537
ASZ75398.1 MF472896_p57 metallophosphoesterase phrog_221 metallo-phosphoesterase other -1 37558 38328
ASZ75360.1 MF472896_p19 head-to-tail connector phrog_137 head-tail adaptor Ad1 connector 1 13800 14177
ASZ75342.1 MF472896_p1 hypothetical protein phrog_7736 unknown function unknown function 1 329 442
ASZ75404.1 MF472896_p64 hypothetical protein phrog_789 esterase/lipase other -1 40459 41295
ASZ75418.1 MF472896_p78 hypothetical protein phrog_4569 unknown function unknown function -1 46588 46848
ASZ75424.1 MF472896_p84 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 47886 48197
ASZ75385.1 MF472896_p44 hypothetical protein phrog_896 unknown function unknown function -1 29756 29974
ASZ75350.1 MF472896_p9 hypothetical protein phrog_1087 unknown function unknown function 1 4917 5075
ASZ75391.1 MF472896_p50 hypothetical protein phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 32963 33688
ASZ75430.1 MF472896_p90 hypothetical protein phrog_586 unknown function unknown function -1 49948 50301
ASZ75388.1 MF472896_p47 hypothetical protein phrog_3812 unknown function unknown function -1 32151 32333
ASZ75365.1 MF472896_p24 major tail protein phrog_117 major tail protein tail 1 15499 16092
ASZ75409.1 MF472896_p69 hypothetical protein phrog_2731 unknown function unknown function -1 43068 43205
ASZ75361.1 MF472896_p20 hypothetical protein phrog_830 head-tail connector protein connector 1 14174 14365
ASZ75363.1 MF472896_p22 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 14730 15065
ASZ75425.1 MF472896_p85 hypothetical protein phrog_421 unknown function unknown function -1 48197 48952
ASZ75416.1 MF472896_p76 hypothetical protein phrog_1173 unknown function unknown function -1 46115 46282
ASZ75393.1 MF472896_p52 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 34310 36364
ASZ75415.1 MF472896_p75 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 45292 45870
ASZ75387.1 MF472896_p46 hypothetical protein phrog_2094 unknown function unknown function -1 31801 32154
ASZ75356.1 MF472896_p15 capsid maturation protease phrog_193 head maturation protease head and packaging 1 11098 11982
ASZ75359.1 MF472896_p18 head-to-tail connector phrog_748 head-tail connector protein connector 1 13615 13797
ASZ75376.1 MF472896_p35 hypothetical protein phrog_733 excisionase integration and excision 1 27108 27542
ASZ75372.1 MF472896_p31 minor tail protein phrog_404 minor tail protein tail 1 22835 23179
ASZ75353.1 MF472896_p12 lysin B phrog_102 endolysin lysis 1 6822 7814
ASZ75397.1 MF472896_p56 hypothetical protein phrog_2436 unknown function unknown function -1 37405 37554
ASZ75406.1 MF472896_p66 hypothetical protein phrog_397 unknown function unknown function -1 41552 41782
ASZ75423.1 MF472896_p83 hypothetical protein phrog_1477 unknown function unknown function -1 47758 47886
ASZ75431.1 MF472896_p91 hypothetical protein phrog_12399 unknown function unknown function -1 50298 50411
ASZ75348.1 MF472896_p7 hypothetical protein phrog_1260 minor tail protein tail 1 3454 4419
ASZ75364.1 MF472896_p23 head-to-tail connector phrog_123 tail terminator connector 1 15062 15478
ASZ75389.1 MF472896_p48 hypothetical protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 32333 32755