| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF490236 |
Definition |
Pseudomonas phage vB_PaeP_PYO2, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Litunavirus; unclassified Litunavirus. |
DB of origin |
NUCCORE |
Length |
72697 |
Host Name |
Pseudomonas |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
91 |
%GC |
54.84 |
Number of singletons |
0 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASZ72095.1 | MF490236_p46 | protein of an unannotated phage | phrog_7722 | unknown function | unknown function | 1 | 26598 | 26822 |
| ASZ72077.1 | MF490236_p28 | protein of an unannotated phage | phrog_8451 | unknown function | unknown function | 1 | 10720 | 11301 |
| ASZ72058.1 | MF490236_p9 | protein of an unannotated phage | phrog_8885 | unknown function | unknown function | 1 | 2597 | 2815 |
| ASZ72113.1 | MF490236_p64 | protein of an unannotated phage | phrog_3934 | unknown function | unknown function | 1 | 41535 | 41978 |
| ASZ72083.1 | MF490236_p34 | protein of an unannotated phage | phrog_1297 | ATPase | other | 1 | 13604 | 14674 |
| ASZ72129.1 | MF490236_p80 | protein of an unannotated phage | phrog_1216 | portal protein | head and packaging | -1 | 63639 | 65819 |
| ASZ72090.1 | MF490236_p41 | protein of an unannotated phage | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | 1 | 21009 | 21479 |
| ASZ72118.1 | MF490236_p69 | protein of an unannotated phage | phrog_7891 | unknown function | unknown function | 1 | 44079 | 44396 |
| ASZ72140.1 | MF490236_p91 | protein of an unannotated phage | phrog_6483 | unknown function | unknown function | 1 | 72255 | 72509 |
| ASZ72078.1 | MF490236_p29 | protein of an unannotated phage | phrog_8374 | unknown function | unknown function | 1 | 11301 | 11822 |
| ASZ72107.1 | MF490236_p58 | protein of an unannotated phage | phrog_2452 | unknown function | unknown function | 1 | 36038 | 36418 |
| ASZ72138.1 | MF490236_p89 | protein of an unannotated phage | phrog_9146 | unknown function | unknown function | 1 | 70675 | 70983 |
| ASZ72056.1 | MF490236_p7 | protein of an unannotated phage | phrog_8449 | unknown function | unknown function | 1 | 2074 | 2370 |
| ASZ72067.1 | MF490236_p18 | protein of an unannotated phage | phrog_8585 | unknown function | unknown function | 1 | 5557 | 5904 |
| ASZ72125.1 | MF490236_p76 | protein of an unannotated phage | phrog_2130 | unknown function | unknown function | -1 | 60084 | 60749 |
| ASZ72079.1 | MF490236_p30 | protein of an unannotated phage | phrog_26633 | unknown function | unknown function | -1 | 11744 | 12040 |
| ASZ72134.1 | MF490236_p85 | protein of an unannotated phage | phrog_2109 | unknown function | unknown function | -1 | 68992 | 69717 |
| ASZ72080.1 | MF490236_p31 | protein of an unannotated phage | phrog_8112 | unknown function | unknown function | 1 | 12287 | 12472 |
| ASZ72128.1 | MF490236_p79 | protein of an unannotated phage | phrog_2346 | unknown function | unknown function | -1 | 63231 | 63569 |
| ASZ72093.1 | MF490236_p44 | protein of an unannotated phage | phrog_2979 | RIIA lysis inhibitor | lysis | 1 | 22244 | 24760 |
| ASZ72122.1 | MF490236_p73 | protein of an unannotated phage | phrog_2646 | unknown function | unknown function | -1 | 56387 | 56854 |
| ASZ72115.1 | MF490236_p66 | protein of an unannotated phage | phrog_7564 | unknown function | unknown function | 1 | 42538 | 42978 |
| ASZ72137.1 | MF490236_p88 | protein of an unannotated phage | phrog_10651 | unknown function | unknown function | 1 | 70424 | 70684 |
| ASZ72112.1 | MF490236_p63 | protein of an unannotated phage | phrog_6026 | unknown function | unknown function | 1 | 41173 | 41538 |
| ASZ72135.1 | MF490236_p86 | protein of an unannotated phage | phrog_9047 | unknown function | unknown function | 1 | 69784 | 70215 |
| ASZ72097.1 | MF490236_p48 | protein of an unannotated phage | phrog_8307 | unknown function | unknown function | 1 | 27273 | 27464 |
| ASZ72111.1 | MF490236_p62 | protein of an unannotated phage | phrog_743 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 40423 | 41169 |
| ASZ72103.1 | MF490236_p54 | protein of an unannotated phage | phrog_3370 | unknown function | unknown function | -1 | 32967 | 33638 |
| ASZ72074.1 | MF490236_p25 | protein of an unannotated phage | phrog_6140 | unknown function | unknown function | 1 | 9315 | 9539 |
| ASZ72065.1 | MF490236_p16 | protein of an unannotated phage | phrog_7756 | unknown function | unknown function | 1 | 4826 | 5077 |
| ASZ72050.1 | MF490236_p1 | protein of an unannotated phage | phrog_6483 | unknown function | unknown function | 1 | 201 | 455 |
| ASZ72117.1 | MF490236_p68 | protein of an unannotated phage | phrog_8394 | unknown function | unknown function | 1 | 43846 | 44082 |
| ASZ72069.1 | MF490236_p20 | protein of an unannotated phage | phrog_8597 | unknown function | unknown function | 1 | 6861 | 7121 |
| ASZ72100.1 | MF490236_p51 | protein of an unannotated phage | phrog_3108 | unknown function | unknown function | -1 | 28586 | 29110 |
| ASZ72082.1 | MF490236_p33 | protein of an unannotated phage | phrog_4781 | unknown function | unknown function | 1 | 13330 | 13572 |
| ASZ72105.1 | MF490236_p56 | protein of an unannotated phage | phrog_496 | tail fiber protein | tail | -1 | 33931 | 35220 |
| ASZ72053.1 | MF490236_p4 | protein of an unannotated phage | phrog_3968 | unknown function | unknown function | 1 | 1285 | 1527 |
| ASZ72101.1 | MF490236_p52 | protein of an unannotated phage | phrog_2687 | unknown function | unknown function | -1 | 29107 | 29301 |
| ASZ72068.1 | MF490236_p19 | protein of an unannotated phage | phrog_2166 | N4-like RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 5916 | 6848 |
| ASZ72096.1 | MF490236_p47 | protein of an unannotated phage | phrog_6854 | holin | lysis | 1 | 26906 | 27223 |
| ASZ72075.1 | MF490236_p26 | protein of an unannotated phage | phrog_7111 | unknown function | unknown function | 1 | 9543 | 10169 |
| ASZ72126.1 | MF490236_p77 | protein of an unannotated phage | phrog_1357 | major head protein | head and packaging | -1 | 60807 | 62006 |
| ASZ72070.1 | MF490236_p21 | protein of an unannotated phage | phrog_14277 | unknown function | unknown function | 1 | 7156 | 7440 |
| ASZ72123.1 | MF490236_p74 | protein of an unannotated phage | phrog_2220 | unknown function | unknown function | -1 | 56835 | 59057 |
| ASZ72061.1 | MF490236_p12 | protein of an unannotated phage | phrog_8570 | unknown function | unknown function | 1 | 3336 | 3521 |
| ASZ72109.1 | MF490236_p60 | protein of an unannotated phage | phrog_2135 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 37445 | 39619 |
| ASZ72059.1 | MF490236_p10 | protein of an unannotated phage | phrog_8334 | unknown function | unknown function | 1 | 2812 | 3045 |
| ASZ72104.1 | MF490236_p55 | protein of an unannotated phage | phrog_4047 | unknown function | unknown function | -1 | 33635 | 33934 |
| ASZ72086.1 | MF490236_p37 | protein of an unannotated phage | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | 1 | 16520 | 17686 |
| ASZ72139.1 | MF490236_p90 | protein of an unannotated phage | phrog_8657 | unknown function | unknown function | 1 | 71187 | 71837 |
| ASZ72121.1 | MF490236_p72 | protein of an unannotated phage | phrog_6467 | unknown function | unknown function | -1 | 54822 | 56387 |
| ASZ72136.1 | MF490236_p87 | protein of an unannotated phage | phrog_8800 | unknown function | unknown function | 1 | 70215 | 70427 |
| ASZ72076.1 | MF490236_p27 | protein of an unannotated phage | phrog_8613 | unknown function | unknown function | 1 | 10166 | 10720 |
| ASZ72063.1 | MF490236_p14 | protein of an unannotated phage | phrog_8775 | unknown function | unknown function | 1 | 4090 | 4425 |
| ASZ72108.1 | MF490236_p59 | protein of an unannotated phage | phrog_2139 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 36420 | 37430 |
| ASZ72124.1 | MF490236_p75 | protein of an unannotated phage | phrog_2050 | virion structural protein | head and packaging | -1 | 59115 | 60080 |
| ASZ72052.1 | MF490236_p3 | protein of an unannotated phage | phrog_3968 | unknown function | unknown function | 1 | 1058 | 1288 |
| ASZ72120.1 | MF490236_p71 | protein of an unannotated phage | phrog_2206 | virion RNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 44625 | 54821 |
| ASZ72057.1 | MF490236_p8 | protein of an unannotated phage | phrog_8477 | unknown function | unknown function | 1 | 2374 | 2577 |
| ASZ72094.1 | MF490236_p45 | protein of an unannotated phage | phrog_2886 | RIIB lysis inhibitor | lysis | 1 | 24772 | 26550 |
| ASZ72102.1 | MF490236_p53 | protein of an unannotated phage | phrog_7697 | tail fiber protein | tail | -1 | 29656 | 32928 |
| ASZ72099.1 | MF490236_p50 | protein of an unannotated phage | phrog_312 | Rz-like spanin | lysis | -1 | 28077 | 28589 |
| ASZ72091.1 | MF490236_p42 | protein of an unannotated phage | phrog_8620 | unknown function | unknown function | 1 | 21654 | 22052 |
| ASZ72071.1 | MF490236_p22 | protein of an unannotated phage | phrog_8144 | unknown function | unknown function | 1 | 7444 | 7716 |
| ASZ72081.1 | MF490236_p32 | protein of an unannotated phage | phrog_5534 | unknown function | unknown function | 1 | 12500 | 13333 |
| ASZ72127.1 | MF490236_p78 | protein of an unannotated phage | phrog_2120 | tail length tape measure protein | tail | -1 | 62041 | 63231 |
| ASZ72087.1 | MF490236_p38 | protein of an unannotated phage | phrog_7095 | unknown function | unknown function | 1 | 17686 | 18213 |
| ASZ72116.1 | MF490236_p67 | protein of an unannotated phage | phrog_7212 | unknown function | unknown function | 1 | 43036 | 43440 |
| ASZ72084.1 | MF490236_p35 | protein of an unannotated phage | phrog_14291 | unknown function | unknown function | 1 | 14686 | 15204 |
| ASZ72130.1 | MF490236_p81 | protein of an unannotated phage | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 65854 | 66273 |
| ASZ72114.1 | MF490236_p65 | protein of an unannotated phage | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 41966 | 42526 |
| ASZ72131.1 | MF490236_p82 | protein of an unannotated phage | phrog_8880 | unknown function | unknown function | 1 | 66277 | 66576 |
| ASZ72055.1 | MF490236_p6 | protein of an unannotated phage | phrog_2614 | unknown function | unknown function | 1 | 1782 | 2090 |
| ASZ72066.1 | MF490236_p17 | protein of an unannotated phage | phrog_335 | phosphatase | other | 1 | 5077 | 5517 |
| ASZ72060.1 | MF490236_p11 | protein of an unannotated phage | phrog_8895 | unknown function | unknown function | 1 | 3042 | 3263 |
| ASZ72073.1 | MF490236_p24 | protein of an unannotated phage | phrog_8738 | unknown function | unknown function | 1 | 9090 | 9242 |
| ASZ72064.1 | MF490236_p15 | protein of an unannotated phage | phrog_2072 | unknown function | unknown function | 1 | 4425 | 4826 |
| ASZ72132.1 | MF490236_p83 | protein of an unannotated phage | phrog_2125 | virion structural protein | head and packaging | -1 | 66609 | 67343 |
| ASZ72088.1 | MF490236_p39 | protein of an unannotated phage | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 18213 | 20828 |
| ASZ72092.1 | MF490236_p43 | protein of an unannotated phage | phrog_10495 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 22049 | 22240 |
| ASZ72051.1 | MF490236_p2 | protein of an unannotated phage | phrog_7624 | unknown function | unknown function | 1 | 852 | 1043 |
| ASZ72054.1 | MF490236_p5 | protein of an unannotated phage | phrog_7875 | unknown function | unknown function | 1 | 1527 | 1778 |
| ASZ72133.1 | MF490236_p84 | protein of an unannotated phage | phrog_38 | terminase large subunit | head and packaging | -1 | 67340 | 68992 |
| ASZ72106.1 | MF490236_p57 | protein of an unannotated phage | phrog_3360 | unknown function | unknown function | 1 | 35613 | 36041 |
| ASZ72072.1 | MF490236_p23 | protein of an unannotated phage | phrog_2051 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 7751 | 8992 |
| ASZ72119.1 | MF490236_p70 | protein of an unannotated phage | phrog_8152 | unknown function | unknown function | 1 | 44406 | 44609 |
| ASZ72062.1 | MF490236_p13 | protein of an unannotated phage | phrog_6271 | toxin | moron, auxiliary metabolic gene and host takeover | 1 | 3615 | 3905 |
| ASZ72110.1 | MF490236_p61 | protein of an unannotated phage | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 39662 | 40396 |
| ASZ72085.1 | MF490236_p36 | protein of an unannotated phage | phrog_1314 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 15204 | 16430 |
| ASZ72098.1 | MF490236_p49 | protein of an unannotated phage | phrog_8796 | unknown function | unknown function | 1 | 27457 | 28014 |
| ASZ72089.1 | MF490236_p40 | protein of an unannotated phage | phrog_12945 | ferredoxin | moron, auxiliary metabolic gene and host takeover | 1 | 20825 | 21049 |