| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF490239 |
Definition |
Pseudomonas phage vB_PaeS_S218, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Yuavirus; unclassified Yuavirus. |
DB of origin |
NUCCORE |
Length |
61680 |
Host Name |
Pseudomonas |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
86 |
%GC |
64.45 |
Number of singletons |
3 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASZ72341.1 | MF490239_p43 | protein of an unannotated phage | phrog_9147 | unknown function | unknown function | 1 | 34155 | 34760 |
| ASZ72352.1 | MF490239_p54 | protein of an unannotated phage | phrog_8776 | unknown function | unknown function | 1 | 39044 | 39652 |
| ASZ72315.1 | MF490239_p17 | protein of an unannotated phage | phrog_17271 | unknown function | unknown function | 1 | 16038 | 16223 |
| ASZ72351.1 | MF490239_p53 | protein of an unannotated phage | phrog_54 | DksA-like zinc-finger protein | other | 1 | 38752 | 38943 |
| ASZ72303.1 | MF490239_p5 | protein of an unannotated phage | phrog_778 | tail assembly protein | tail | 1 | 4481 | 5290 |
| ASZ72336.1 | MF490239_p38 | protein of an unannotated phage | phrog_2053 | unknown function | unknown function | 1 | 31568 | 31783 |
| ASZ72332.1 | MF490239_p34 | protein of an unannotated phage | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | 1 | 27970 | 28431 |
| ASZ72322.1 | MF490239_p24 | protein of an unannotated phage | phrog_800 | terminase small subunit | head and packaging | 1 | 21038 | 21601 |
| ASZ72330.1 | MF490239_p32 | protein of an unannotated phage | phrog_8389 | unknown function | unknown function | 1 | 27465 | 27779 |
| ASZ72347.1 | MF490239_p49 | protein of an unannotated phage | phrog_4301 | unknown function | unknown function | 1 | 36577 | 37194 |
| ASZ72299.1 | MF490239_p1 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 15 | 257 |
| ASZ72380.1 | MF490239_p82 | protein of an unannotated phage | phrog_290 | minor tail protein | tail | 1 | 56344 | 57876 |
| ASZ72372.1 | MF490239_p74 | protein of an unannotated phage | phrog_6213 | unknown function | unknown function | 1 | 52553 | 53158 |
| ASZ72323.1 | MF490239_p25 | protein of an unannotated phage | phrog_2396 | unknown function | unknown function | 1 | 21613 | 22584 |
| ASZ72314.1 | MF490239_p16 | protein of an unannotated phage | phrog_84 | ribonucleoside-diphosphate reductase large subunit | DNA, RNA and nucleotide metabolism | 1 | 14218 | 16041 |
| ASZ72302.1 | MF490239_p4 | protein of an unannotated phage | phrog_1082 | tail assembly protein | tail | 1 | 2814 | 4484 |
| ASZ72350.1 | MF490239_p52 | protein of an unannotated phage | phrog_255 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 38187 | 38759 |
| ASZ72333.1 | MF490239_p35 | protein of an unannotated phage | phrog_2165 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 28424 | 28822 |
| ASZ72382.1 | MF490239_p84 | protein of an unannotated phage | phrog_3817 | tail chaperonin | tail | 1 | 58421 | 58687 |
| ASZ72313.1 | MF490239_p15 | protein of an unannotated phage | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | 1 | 12964 | 14157 |
| ASZ72363.1 | MF490239_p65 | protein of an unannotated phage | phrog_7839 | unknown function | unknown function | 1 | 43864 | 44229 |
| ASZ72383.1 | MF490239_p85 | protein of an unannotated phage | phrog_169 | tail completion or Neck1 protein | connector | 1 | 58671 | 59117 |
| ASZ72364.1 | MF490239_p66 | protein of an unannotated phage | phrog_4044 | terminase small subunit | head and packaging | 1 | 44893 | 45420 |
| ASZ72367.1 | MF490239_p69 | protein of an unannotated phage | phrog_9943 | unknown function | unknown function | 1 | 48554 | 48685 |
| ASZ72325.1 | MF490239_p27 | protein of an unannotated phage | phrog_5131 | thymidylate synthase | DNA, RNA and nucleotide metabolism | 1 | 23214 | 24269 |
| ASZ72384.1 | MF490239_p86 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 59312 | 61033 |
| ASZ72371.1 | MF490239_p73 | protein of an unannotated phage | phrog_15312 | virion structural protein | head and packaging | 1 | 51961 | 52533 |
| ASZ72338.1 | MF490239_p40 | protein of an unannotated phage | phrog_8203 | unknown function | unknown function | 1 | 32299 | 33477 |
| ASZ72365.1 | MF490239_p67 | protein of an unannotated phage | phrog_2 | terminase large subunit | head and packaging | 1 | 45420 | 46967 |
| ASZ72360.1 | MF490239_p62 | protein of an unannotated phage | phrog_11606 | unknown function | unknown function | 1 | 43004 | 43192 |
| ASZ72321.1 | MF490239_p23 | protein of an unannotated phage | phrog_9252 | DNA repair photolyase | DNA, RNA and nucleotide metabolism | 1 | 19541 | 20983 |
| ASZ72353.1 | MF490239_p55 | protein of an unannotated phage | phrog_15793 | unknown function | unknown function | 1 | 39784 | 40047 |
| ASZ72381.1 | MF490239_p83 | protein of an unannotated phage | phrog_313 | Tail assembly chaperone | tail | 1 | 57939 | 58397 |
| ASZ72335.1 | MF490239_p37 | protein of an unannotated phage | phrog_1829 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 29146 | 31557 |
| ASZ72374.1 | MF490239_p76 | protein of an unannotated phage | phrog_3198 | Rz-like spanin | lysis | 1 | 53592 | 53858 |
| ASZ72312.1 | MF490239_p14 | protein of an unannotated phage | phrog_2402 | unknown function | unknown function | 1 | 12023 | 12862 |
| ASZ72376.1 | MF490239_p78 | protein of an unannotated phage | phrog_669 | endolysin | lysis | 1 | 54246 | 54971 |
| ASZ72300.1 | MF490239_p2 | protein of an unannotated phage | phrog_687 | structural protein | head and packaging | 1 | 267 | 1796 |
| ASZ72345.1 | MF490239_p47 | protein of an unannotated phage | phrog_9341 | unknown function | unknown function | 1 | 35876 | 36163 |
| ASZ72356.1 | MF490239_p58 | protein of an unannotated phage | phrog_10132 | anti-restriction protein | moron, auxiliary metabolic gene and host takeover | 1 | 41535 | 41948 |
| ASZ72375.1 | MF490239_p77 | protein of an unannotated phage | phrog_8226 | holin | lysis | 1 | 53926 | 54261 |
| ASZ72342.1 | MF490239_p44 | protein of an unannotated phage | phrog_7569 | unknown function | unknown function | 1 | 34757 | 35233 |
| ASZ72328.1 | MF490239_p30 | protein of an unannotated phage | phrog_5839 | unknown function | unknown function | 1 | 25088 | 25474 |
| ASZ72318.1 | MF490239_p20 | protein of an unannotated phage | phrog_4445 | unknown function | unknown function | 1 | 17483 | 17746 |
| ASZ72331.1 | MF490239_p33 | protein of an unannotated phage | phrog_20455 | unknown function | unknown function | 1 | 27776 | 27973 |
| ASZ72348.1 | MF490239_p50 | protein of an unannotated phage | phrog_16645 | unknown function | unknown function | 1 | 37221 | 37904 |
| ASZ72339.1 | MF490239_p41 | protein of an unannotated phage | phrog_9297 | unknown function | unknown function | 1 | 33474 | 33815 |
| ASZ72311.1 | MF490239_p13 | protein of an unannotated phage | phrog_2378 | unknown function | unknown function | 1 | 11335 | 11880 |
| ASZ72362.1 | MF490239_p64 | protein of an unannotated phage | phrog_6596 | unknown function | unknown function | 1 | 43448 | 43864 |
| ASZ72305.1 | MF490239_p7 | protein of an unannotated phage | phrog_1196 | tail assembly chaperone | tail | 1 | 5537 | 5740 |
| ASZ72358.1 | MF490239_p60 | protein of an unannotated phage | phrog_12453 | unknown function | unknown function | 1 | 42358 | 42663 |
| ASZ72308.1 | MF490239_p10 | protein of an unannotated phage | phrog_6420 | unknown function | unknown function | 1 | 8448 | 8792 |
| ASZ72377.1 | MF490239_p79 | protein of an unannotated phage | phrog_477 | head-tail adaptor Ad1 | connector | 1 | 54971 | 55489 |
| ASZ72306.1 | MF490239_p8 | protein of an unannotated phage | phrog_1101 | tail protein | tail | 1 | 5724 | 7895 |
| ASZ72355.1 | MF490239_p57 | protein of an unannotated phage | phrog_5594 | unknown function | unknown function | 1 | 40988 | 41458 |
| ASZ72379.1 | MF490239_p81 | protein of an unannotated phage | phrog_179 | tail terminator | connector | 1 | 55858 | 56310 |
| ASZ72304.1 | MF490239_p6 | protein of an unannotated phage | phrog_1180 | tail assembly chaperone | tail | 1 | 5304 | 5537 |
| ASZ72316.1 | MF490239_p18 | protein of an unannotated phage | phrog_12275 | unknown function | unknown function | 1 | 16183 | 16689 |
| ASZ72320.1 | MF490239_p22 | protein of an unannotated phage | phrog_7093 | threonine dehydratase | other | 1 | 18633 | 19469 |
| ASZ72369.1 | MF490239_p71 | protein of an unannotated phage | phrog_206 | head scaffolding protein | head and packaging | 1 | 49946 | 50728 |
| ASZ72373.1 | MF490239_p75 | protein of an unannotated phage | phrog_8884 | unknown function | unknown function | 1 | 53186 | 53356 |
| ASZ72310.1 | MF490239_p12 | protein of an unannotated phage | phrog_5888 | unknown function | unknown function | 1 | 10922 | 11275 |
| ASZ72324.1 | MF490239_p26 | protein of an unannotated phage | phrog_1965 | unknown function | unknown function | 1 | 22640 | 23200 |
| ASZ72327.1 | MF490239_p29 | protein of an unannotated phage | phrog_14034 | unknown function | unknown function | 1 | 24892 | 25119 |
| ASZ72346.1 | MF490239_p48 | protein of an unannotated phage | phrog_9190 | unknown function | unknown function | 1 | 36168 | 36437 |
| ASZ72343.1 | MF490239_p45 | protein of an unannotated phage | phrog_13330 | unknown function | unknown function | 1 | 35230 | 35559 |
| ASZ72361.1 | MF490239_p63 | protein of an unannotated phage | phrog_6858 | unknown function | unknown function | 1 | 43197 | 43448 |
| ASZ72378.1 | MF490239_p80 | protein of an unannotated phage | phrog_161 | head closure Hc1 | connector | 1 | 55493 | 55861 |
| ASZ72368.1 | MF490239_p70 | protein of an unannotated phage | phrog_241 | head morphogenesis | head and packaging | 1 | 48669 | 49877 |
| ASZ72301.1 | MF490239_p3 | protein of an unannotated phage | phrog_687 | structural protein | head and packaging | 1 | 1811 | 2812 |
| ASZ72337.1 | MF490239_p39 | protein of an unannotated phage | phrog_14626 | unknown function | unknown function | 1 | 31895 | 32260 |
| ASZ72334.1 | MF490239_p36 | protein of an unannotated phage | phrog_3 | transcriptional repressor | transcription regulation | 1 | 28807 | 29133 |
| ASZ72319.1 | MF490239_p21 | protein of an unannotated phage | phrog_6364 | unknown function | unknown function | 1 | 17756 | 18631 |
| ASZ72359.1 | MF490239_p61 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 42660 | 43007 |
| ASZ72317.1 | MF490239_p19 | protein of an unannotated phage | phrog_7790 | unknown function | unknown function | 1 | 16789 | 17472 |
| ASZ72354.1 | MF490239_p56 | protein of an unannotated phage | phrog_3628 | unknown function | unknown function | 1 | 40099 | 40983 |
| ASZ72329.1 | MF490239_p31 | protein of an unannotated phage | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 25474 | 27468 |
| ASZ72340.1 | MF490239_p42 | protein of an unannotated phage | phrog_8938 | unknown function | unknown function | 1 | 33883 | 34152 |
| ASZ72344.1 | MF490239_p46 | protein of an unannotated phage | phrog_8020 | unknown function | unknown function | 1 | 35577 | 35873 |
| ASZ72349.1 | MF490239_p51 | protein of an unannotated phage | phrog_5016 | unknown function | unknown function | 1 | 37904 | 38185 |
| ASZ72309.1 | MF490239_p11 | protein of an unannotated phage | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 9220 | 10914 |
| ASZ72370.1 | MF490239_p72 | protein of an unannotated phage | phrog_212 | major head protein | head and packaging | 1 | 50924 | 51856 |
| ASZ72307.1 | MF490239_p9 | protein of an unannotated phage | phrog_5363 | unknown function | unknown function | 1 | 7895 | 8380 |
| ASZ72357.1 | MF490239_p59 | protein of an unannotated phage | phrog_10108 | unknown function | unknown function | 1 | 42006 | 42335 |
| ASZ72326.1 | MF490239_p28 | protein of an unannotated phage | phrog_6047 | unknown function | unknown function | 1 | 24282 | 24917 |
| ASZ72366.1 | MF490239_p68 | protein of an unannotated phage | phrog_145 | portal protein | head and packaging | 1 | 47025 | 48557 |