Genomic map of Vibrio phage vB_VspS_VS-ABTNL-3 (MF497422)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF497422
Definition
Vibrio phage vB_VspS_VS-ABTNL-3, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
DB of origin
NUCCORE
Length
43573
Host Name
Vibrio splendidus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
51
%GC
43.94
Number of singletons
32
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATB52637.1 MF497422_p2 endolysin phrog_315 endolysin lysis 1 523 1098
ATB52650.1 MF497422_p14 hypothetical protein singleton unknown function unknown function 1 10338 11324
ATB52660.1 MF497422_p24 DNA methylase singleton unknown function unknown function 1 17815 23187
ATB52683.1 MF497422_p47 hypothetical protein phrog_37277 unknown function unknown function -1 38485 38772
ATB52651.1 MF497422_p15 hypothetical protein phrog_8123 unknown function unknown function 1 11343 11846
ATB52648.1 MF497422_p12 major capsid protein phrog_1328 major head protein head and packaging 1 8766 9962
ATB52646.1 MF497422_p10 hypothetical protein singleton unknown function unknown function 1 7661 7873
ATB52680.1 MF497422_p44 hypothetical protein singleton unknown function unknown function -1 37133 37579
ATB52638.1 MF497422_p1 hypothetical protein singleton unknown function unknown function 1 254 523
ATB52641.1 MF497422_p5 hypothetical protein singleton unknown function unknown function 1 2665 3072
ATB52658.1 MF497422_p22 DNA injection protein phrog_4287 DNA ejection protein DNA, RNA and nucleotide metabolism 1 15774 16625
ATB52645.1 MF497422_p9 hypothetical protein phrog_332 head-tail adaptor connector 1 5707 7686
ATB52639.1 MF497422_p3 glycoprotein phrog_4492 tail fiber protein tail 1 1134 2192
ATB52640.1 MF497422_p4 hypothetical protein singleton unknown function unknown function 1 2202 2552
ATB52674.1 MF497422_p38 hypothetical protein singleton unknown function unknown function -1 33179 34192
ATB52686.1 MF497422_p50 hypothetical protein phrog_28928 unknown function unknown function 1 41293 41826
ATB52666.1 MF497422_p30 polynucleotide kinase phrog_415 polynucleotide kinase other -1 28038 28565
ATB52679.1 MF497422_p43 hypothetical protein singleton unknown function unknown function 1 36788 37033
ATB52671.1 MF497422_p35 DNA helicase phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 31178 32134
ATB52653.1 MF497422_p17 tail fiber protein singleton unknown function unknown function 1 12474 13187
ATB52662.1 MF497422_p26 hypothetical protein phrog_14296 DNA primase DNA, RNA and nucleotide metabolism -1 23559 24875
ATB52664.1 MF497422_p28 hypothetical protein singleton unknown function unknown function -1 25746 26300
ATB52665.1 MF497422_p29 3'-5'exonuclease and polymerase domain protein phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 26300 28006
ATB52659.1 MF497422_p23 amino acid-binding protein singleton unknown function unknown function 1 16629 17813
ATB52670.1 MF497422_p34 hypothetical protein singleton unknown function unknown function -1 30997 31275
ATB52656.1 MF497422_p20 hypothetical protein singleton unknown function unknown function 1 15027 15323
ATB52663.1 MF497422_p27 DNA polymerase I phrog_5995 DNA polymerase DNA, RNA and nucleotide metabolism -1 24872 25768
ATB52669.1 MF497422_p33 hypothetical protein singleton unknown function unknown function -1 30663 30995
ATB52644.1 MF497422_p8 hypothetical protein phrog_38 terminase large subunit head and packaging 1 4190 5707
ATB52642.1 MF497422_p6 RNA polymerase singleton unknown function unknown function 1 3170 3754
ATB52661.1 MF497422_p25 hypothetical protein singleton unknown function unknown function -1 23378 23557
ATB52647.1 MF497422_p11 hypothetical protein singleton unknown function unknown function 1 7854 8753
ATB52687.1 MF497422_p51 hypothetical protein phrog_28928 unknown function unknown function 1 42572 43159
ATB52643.1 MF497422_p7 endonuclease I singleton unknown function unknown function 1 3720 4193
ATB52657.1 MF497422_p21 hypothetical protein singleton unknown function unknown function 1 15359 15772
ATB52676.1 MF497422_p40 hypothetical protein singleton unknown function unknown function -1 34511 34840
ATB52682.1 MF497422_p46 hypothetical protein phrog_2201 unknown function unknown function -1 38190 38492
ATB52675.1 MF497422_p39 hypothetical protein singleton unknown function unknown function -1 34195 34521
ATB52668.1 MF497422_p32 hypothetical protein singleton unknown function unknown function -1 30025 30516
ATB52685.1 MF497422_p49 hypothetical protein singleton unknown function unknown function -1 40046 40606
ATB52654.1 MF497422_p18 tail fiber assembly protein singleton unknown function unknown function 1 13187 13456
ATB52673.1 MF497422_p37 hypothetical protein singleton unknown function unknown function -1 32654 33097
ATB52649.1 MF497422_p13 hypothetical protein singleton unknown function unknown function 1 10036 10329
ATB52667.1 MF497422_p31 site-specific DNA-methyltransferase phrog_67 DNA methyltransferase other -1 28578 29954
ATB52684.1 MF497422_p48 hypothetical protein singleton unknown function unknown function -1 39342 39905
ATB52681.1 MF497422_p45 hypothetical protein singleton unknown function unknown function -1 37856 38188
ATB52678.1 MF497422_p42 hypothetical protein singleton unknown function unknown function -1 36249 36743
ATB52672.1 MF497422_p36 hypothetical protein singleton unknown function unknown function -1 32192 32653
ATB52652.1 MF497422_p16 hypothetical protein singleton unknown function unknown function 1 11857 12474
ATB52655.1 MF497422_p19 partical protein phrog_3287 virion structural protein head and packaging 1 13480 15030
ATB52677.1 MF497422_p41 ATP-dependent DNA helicase phrog_1967 DNA helicase DNA, RNA and nucleotide metabolism -1 34734 36176