| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF541403 |
Definition |
Streptomyces phage BeardedLady, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Likavirus; unclassified Likavirus. |
DB of origin |
NUCCORE |
Length |
49941 |
Host Name |
Streptomyces xanthochromogenes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
74 |
%GC |
66.24 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATE84891.1 | MF541403_p13 | head-to-tail connector protein | phrog_320 | head closure Hc1 | connector | 1 | 9091 | 9426 |
| ATE84893.1 | MF541403_p15 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 9824 | 10327 |
| ATE84894.1 | MF541403_p16 | hypothetical protein | phrog_117 | major tail protein | tail | 1 | 10342 | 11085 |
| ATE84881.1 | MF541403_p3 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1258 | 1629 |
| ATE84951.1 | MF541403_p73 | hypothetical protein | phrog_4485 | unknown function | unknown function | -1 | 48364 | 48510 |
| ATE84917.1 | MF541403_p39 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 27805 | 28236 |
| ATE84926.1 | MF541403_p48 | DNA bridging protein | phrog_6509 | Lsr2-like DNA bridging protein | DNA, RNA and nucleotide metabolism | 1 | 34178 | 34396 |
| ATE84919.1 | MF541403_p41 | hypothetical protein | phrog_4022 | unknown function | unknown function | 1 | 28732 | 29079 |
| ATE84942.1 | MF541403_p64 | hypothetical protein | phrog_4867 | unknown function | unknown function | -1 | 44104 | 44469 |
| ATE84948.1 | MF541403_p70 | hypothetical protein | phrog_4275 | unknown function | unknown function | -1 | 46677 | 46802 |
| ATE84928.1 | MF541403_p50 | thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 35924 | 36637 |
| ATE84910.1 | MF541403_p32 | exonuclease | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 23780 | 24757 |
| ATE84931.1 | MF541403_p53 | DNA polymerase III alpha | phrog_405 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 37131 | 40610 |
| ATE84889.1 | MF541403_p11 | major capsid protein | phrog_283 | major head protein | head and packaging | 1 | 7498 | 8571 |
| ATE84899.1 | MF541403_p21 | minor tail protein | phrog_538 | minor tail protein | tail | 1 | 16101 | 17315 |
| ATE84934.1 | MF541403_p56 | hypothetical protein | phrog_4024 | unknown function | unknown function | -1 | 41362 | 41739 |
| ATE84941.1 | MF541403_p63 | hypothetical protein | phrog_21379 | unknown function | unknown function | -1 | 43754 | 43984 |
| ATE84932.1 | MF541403_p54 | hypothetical protein | phrog_3424 | unknown function | unknown function | -1 | 40607 | 40843 |
| ATE84916.1 | MF541403_p38 | hypothetical protein | phrog_4673 | unknown function | unknown function | 1 | 27666 | 27818 |
| ATE84883.1 | MF541403_p5 | thioredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 1940 | 2188 |
| ATE84896.1 | MF541403_p17 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 11197 | 11912 |
| ATE84947.1 | MF541403_p69 | hypothetical protein | phrog_2355 | unknown function | unknown function | -1 | 46241 | 46648 |
| ATE84921.1 | MF541403_p43 | hypothetical protein | phrog_3979 | unknown function | unknown function | 1 | 29246 | 29473 |
| ATE84906.1 | MF541403_p28 | hypothetical protein | phrog_4092 | unknown function | unknown function | 1 | 22184 | 22444 |
| ATE84901.1 | MF541403_p23 | hypothetical protein | phrog_4013 | unknown function | unknown function | 1 | 17627 | 18967 |
| ATE84940.1 | MF541403_p62 | hypothetical protein | phrog_4785 | unknown function | unknown function | -1 | 43423 | 43698 |
| ATE84915.1 | MF541403_p37 | holliday junction resolvase | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 27307 | 27669 |
| ATE84943.1 | MF541403_p65 | HNH endonuclease | phrog_4842 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 44561 | 45025 |
| ATE84953.1 | MF541403_p1 | hypothetical protein | phrog_4207 | unknown function | unknown function | -1 | 91 | 297 |
| ATE84923.1 | MF541403_p45 | helix-turn-helix DNA binding domain protein | phrog_351 | RNA polymerase sigma factor | transcription regulation | 1 | 30689 | 31564 |
| ATE84930.1 | MF541403_p52 | hypothetical protein | phrog_5971 | unknown function | unknown function | -1 | 36912 | 37049 |
| ATE84895.1 | MF541403_p18 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 11197 | 11520 |
| ATE84949.1 | MF541403_p71 | hypothetical protein | phrog_4313 | unknown function | unknown function | -1 | 46915 | 47733 |
| ATE84939.1 | MF541403_p61 | hypothetical protein | phrog_15237 | unknown function | unknown function | -1 | 43155 | 43322 |
| ATE84909.1 | MF541403_p31 | hypothetical protein | phrog_5250 | unknown function | unknown function | 1 | 23415 | 23783 |
| ATE84907.1 | MF541403_p29 | hypothetical protein | phrog_4061 | unknown function | unknown function | -1 | 22500 | 22760 |
| ATE84914.1 | MF541403_p36 | dsDNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 26483 | 27238 |
| ATE84927.1 | MF541403_p49 | integrase | phrog_95 | integrase | integration and excision | 1 | 34453 | 35775 |
| ATE84929.1 | MF541403_p51 | hypothetical protein | phrog_4071 | unknown function | unknown function | -1 | 36634 | 36909 |
| ATE84888.1 | MF541403_p10 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 6883 | 7428 |
| ATE84903.1 | MF541403_p25 | hypothetical protein | phrog_988 | tail protein | tail | 1 | 19564 | 20844 |
| ATE84892.1 | MF541403_p14 | hypothetical protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 9426 | 9824 |
| ATE84945.1 | MF541403_p67 | hypothetical protein | phrog_4239 | unknown function | unknown function | -1 | 45364 | 45783 |
| ATE84936.1 | MF541403_p58 | hypothetical protein | phrog_5209 | unknown function | unknown function | -1 | 42371 | 42682 |
| ATE84885.1 | MF541403_p7 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 2667 | 4295 |
| ATE84887.1 | MF541403_p9 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 5767 | 6879 |
| ATE84935.1 | MF541403_p57 | deoxynucleoside monophosphate kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 41784 | 42374 |
| ATE84918.1 | MF541403_p40 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 28085 | 28735 |
| ATE84908.1 | MF541403_p30 | immunity repressor | phrog_3929 | transcriptional repressor | transcription regulation | 1 | 22846 | 23298 |
| ATE84898.1 | MF541403_p20 | minor tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 15240 | 16097 |
| ATE84900.1 | MF541403_p22 | hypothetical protein | phrog_1276 | unknown function | unknown function | 1 | 17352 | 17627 |
| ATE84890.1 | MF541403_p12 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 8642 | 9094 |
| ATE84946.1 | MF541403_p68 | hypothetical protein | phrog_6619 | unknown function | unknown function | -1 | 45901 | 46230 |
| ATE84950.1 | MF541403_p72 | hypothetical protein | phrog_3994 | unknown function | unknown function | -1 | 47847 | 48272 |
| ATE84897.1 | MF541403_p19 | tape measure protein | phrog_305 | tail length tape measure protein | tail | 1 | 11916 | 15236 |
| ATE84886.1 | MF541403_p8 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 4328 | 5770 |
| ATE84922.1 | MF541403_p44 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 29466 | 30656 |
| ATE84904.1 | MF541403_p26 | hypothetical protein | phrog_3534 | unknown function | unknown function | 1 | 20844 | 21197 |
| ATE84905.1 | MF541403_p27 | endolysin | phrog_1493 | endolysin | lysis | 1 | 21228 | 22181 |
| ATE84911.1 | MF541403_p33 | hypothetical protein | phrog_3912 | unknown function | unknown function | 1 | 24885 | 25385 |
| ATE84938.1 | MF541403_p60 | hypothetical protein | phrog_11825 | unknown function | unknown function | -1 | 42953 | 43141 |
| ATE84944.1 | MF541403_p66 | hypothetical protein | phrog_3908 | unknown function | unknown function | -1 | 45134 | 45361 |
| ATE84880.1 | MF541403_p2 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 739 | 1053 |
| ATE84925.1 | MF541403_p47 | ribonucleotide reductase | phrog_367 | ribonucleotide reductase | DNA, RNA and nucleotide metabolism | 1 | 32041 | 34131 |
| ATE84882.1 | MF541403_p4 | hypothetical protein | phrog_3555 | unknown function | unknown function | 1 | 1704 | 1934 |
| ATE84924.1 | MF541403_p46 | hypothetical protein | phrog_4123 | unknown function | unknown function | 1 | 31561 | 31938 |
| ATE84884.1 | MF541403_p6 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 2203 | 2628 |
| ATE84952.1 | MF541403_p74 | hypothetical protein | phrog_2563 | unknown function | unknown function | -1 | 48607 | 48993 |
| ATE84913.1 | MF541403_p35 | deoxycytidylate deaminase | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | 1 | 25938 | 26426 |
| ATE84920.1 | MF541403_p42 | hypothetical protein | phrog_6217 | unknown function | unknown function | 1 | 29076 | 29249 |
| ATE84912.1 | MF541403_p34 | hypothetical protein | phrog_1288 | unknown function | unknown function | 1 | 25445 | 25882 |
| ATE84937.1 | MF541403_p59 | hypothetical protein | phrog_3991 | unknown function | unknown function | -1 | 42679 | 42960 |
| ATE84902.1 | MF541403_p24 | hypothetical protein | phrog_4817 | unknown function | unknown function | 1 | 18980 | 19489 |
| ATE84933.1 | MF541403_p55 | hypothetical protein | phrog_3965 | unknown function | unknown function | -1 | 40857 | 41288 |