| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF541406 |
Definition |
Streptomyces phage Dattran, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Likavirus; unclassified Likavirus. |
DB of origin |
NUCCORE |
Length |
50976 |
Host Name |
Streptomyces venezuelae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
77 |
%GC |
65.79 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATE85108.1 | MF541406_p4 | hypothetical protein | phrog_3555 | unknown function | unknown function | 1 | 1428 | 1658 |
| ATE85173.1 | MF541406_p70 | hypothetical protein | phrog_3908 | unknown function | unknown function | -1 | 46542 | 46745 |
| ATE85169.1 | MF541406_p66 | hypothetical protein | phrog_4785 | unknown function | unknown function | -1 | 44748 | 45008 |
| ATE85105.1 | MF541406_p1 | hypothetical protein | phrog_4207 | unknown function | unknown function | -1 | 91 | 297 |
| ATE85116.1 | MF541406_p12 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 8364 | 8813 |
| ATE85168.1 | MF541406_p65 | hypothetical protein | phrog_9778 | unknown function | unknown function | -1 | 44575 | 44751 |
| ATE85107.1 | MF541406_p3 | hypothetical protein | phrog_18964 | unknown function | unknown function | 1 | 1171 | 1350 |
| ATE85130.1 | MF541406_p26 | hypothetical protein | phrog_3534 | unknown function | unknown function | 1 | 21277 | 21630 |
| ATE85151.1 | MF541406_p48 | hypothetical protein | phrog_4123 | unknown function | unknown function | 1 | 32114 | 32485 |
| ATE85146.1 | MF541406_p43 | hypothetical protein | phrog_6217 | unknown function | unknown function | 1 | 29759 | 29932 |
| ATE85165.1 | MF541406_p62 | hypothetical protein | phrog_5209 | unknown function | unknown function | -1 | 43675 | 43953 |
| ATE85179.1 | MF541406_p76 | hypothetical protein | phrog_4485 | unknown function | unknown function | -1 | 49564 | 49683 |
| ATE85155.1 | MF541406_p52 | integrase | phrog_95 | integrase | integration and excision | 1 | 35171 | 36814 |
| ATE85124.1 | MF541406_p20 | minor tail protein | phrog_33 | distal tail protein Dit | tail | 1 | 14976 | 15833 |
| ATE85131.1 | MF541406_p27 | endolysin | phrog_1493 | endolysin | lysis | 1 | 21656 | 22744 |
| ATE85114.1 | MF541406_p10 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 6605 | 7150 |
| ATE85149.1 | MF541406_p46 | hypothetical protein | phrog_1340 | unknown function | unknown function | 1 | 31357 | 31716 |
| ATE85140.1 | MF541406_p36 | deoxycytidylate deaminase | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | 1 | 26615 | 27091 |
| ATE85138.1 | MF541406_p34 | hypothetical protein | phrog_8950 | unknown function | unknown function | 1 | 25913 | 26059 |
| ATE85181.1 | MF541406_p40 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 28470 | 28904 |
| ATE85162.1 | MF541406_p59 | hypothetical protein | phrog_3965 | unknown function | unknown function | -1 | 42126 | 42557 |
| ATE85144.1 | MF541406_p41 | DNA primase | phrog_849 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 28738 | 29403 |
| ATE85161.1 | MF541406_p58 | hypothetical protein | phrog_3424 | unknown function | unknown function | -1 | 41876 | 42112 |
| ATE85112.1 | MF541406_p8 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 4056 | 5492 |
| ATE85143.1 | MF541406_p39 | hypothetical protein | phrog_4673 | unknown function | unknown function | 1 | 28331 | 28483 |
| ATE85159.1 | MF541406_p56 | hypothetical protein | phrog_20783 | unknown function | unknown function | -1 | 38096 | 38383 |
| ATE85129.1 | MF541406_p25 | hypothetical protein | phrog_988 | tail protein | tail | 1 | 19931 | 21277 |
| ATE85111.1 | MF541406_p7 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 2377 | 4023 |
| ATE85128.1 | MF541406_p24 | hypothetical protein | phrog_4817 | unknown function | unknown function | 1 | 19352 | 19855 |
| ATE85110.1 | MF541406_p6 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 1931 | 2356 |
| ATE85153.1 | MF541406_p50 | DNA bridging protein | singleton | unknown function | unknown function | 1 | 34652 | 34951 |
| ATE85113.1 | MF541406_p9 | hypothetical protein | phrog_193 | head maturation protease | head and packaging | 1 | 5489 | 6601 |
| ATE85106.1 | MF541406_p2 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 723 | 1034 |
| ATE85148.1 | MF541406_p45 | hypothetical protein | phrog_284 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 30140 | 31330 |
| ATE85123.1 | MF541406_p19 | tape measure protein | phrog_305 | tail length tape measure protein | tail | 1 | 11685 | 14972 |
| ATE85135.1 | MF541406_p32 | exonuclease | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 24300 | 25271 |
| ATE85126.1 | MF541406_p22 | hypothetical protein | phrog_1276 | unknown function | unknown function | 1 | 17053 | 17349 |
| ATE85120.1 | MF541406_p16 | hypothetical protein | phrog_117 | major tail protein | tail | 1 | 10063 | 10815 |
| ATE85121.1 | MF541406_p18 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 10933 | 11256 |
| ATE85177.1 | MF541406_p74 | hypothetical protein | phrog_4313 | unknown function | unknown function | -1 | 47949 | 48926 |
| ATE85109.1 | MF541406_p5 | thioredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 1664 | 1912 |
| ATE85142.1 | MF541406_p38 | holliday junction resolvase | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 27972 | 28334 |
| ATE85175.1 | MF541406_p72 | hypothetical protein | phrog_2355 | unknown function | unknown function | -1 | 47294 | 47707 |
| ATE85172.1 | MF541406_p69 | HNH endonuclease | phrog_4842 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 45984 | 46439 |
| ATE85170.1 | MF541406_p67 | hypothetical protein | phrog_4867 | unknown function | unknown function | -1 | 45093 | 45449 |
| ATE85115.1 | MF541406_p11 | major capsid protein | phrog_283 | major head protein | head and packaging | 1 | 7221 | 8294 |
| ATE85160.1 | MF541406_p57 | DNA polymerase III alpha | phrog_405 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 38400 | 41879 |
| ATE85141.1 | MF541406_p37 | dsDNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 27148 | 27903 |
| ATE85134.1 | MF541406_p30 | immunity repressor | phrog_3929 | transcriptional repressor | transcription regulation | 1 | 23412 | 23864 |
| ATE85119.1 | MF541406_p15 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 9543 | 10046 |
| ATE85154.1 | MF541406_p51 | hypothetical protein | phrog_11213 | unknown function | unknown function | -1 | 34926 | 35102 |
| ATE85139.1 | MF541406_p35 | hypothetical protein | phrog_1288 | unknown function | unknown function | 1 | 26104 | 26541 |
| ATE85180.1 | MF541406_p77 | hypothetical protein | phrog_2563 | unknown function | unknown function | -1 | 49781 | 50158 |
| ATE85157.1 | MF541406_p54 | hypothetical protein | phrog_4071 | unknown function | unknown function | -1 | 37639 | 37914 |
| ATE85150.1 | MF541406_p47 | hypothetical protein | phrog_3512 | sigma factor | transcription regulation | 1 | 31716 | 32117 |
| ATE85164.1 | MF541406_p61 | deoxynucleoside monophosphate kinase | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 43094 | 43678 |
| ATE85166.1 | MF541406_p63 | hypothetical protein | phrog_3991 | unknown function | unknown function | -1 | 43977 | 44219 |
| ATE85145.1 | MF541406_p42 | hypothetical protein | phrog_4022 | unknown function | unknown function | 1 | 29400 | 29762 |
| ATE85125.1 | MF541406_p21 | minor tail protein | phrog_538 | minor tail protein | tail | 1 | 15838 | 17049 |
| ATE85147.1 | MF541406_p44 | hypothetical protein | phrog_3979 | unknown function | unknown function | 1 | 29929 | 30147 |
| ATE85117.1 | MF541406_p13 | head-to-tail connector protein | phrog_320 | head closure Hc1 | connector | 1 | 8810 | 9145 |
| ATE85167.1 | MF541406_p64 | hypothetical protein | phrog_9416 | unknown function | unknown function | -1 | 44216 | 44491 |
| ATE85158.1 | MF541406_p55 | hypothetical protein | phrog_5971 | unknown function | unknown function | -1 | 37917 | 38099 |
| ATE85136.1 | MF541406_p31 | hypothetical protein | phrog_5250 | unknown function | unknown function | 1 | 24001 | 24303 |
| ATE85156.1 | MF541406_p53 | thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 36926 | 37642 |
| ATE85152.1 | MF541406_p49 | ribonucleotide reductase | phrog_367 | ribonucleotide reductase | DNA, RNA and nucleotide metabolism | 1 | 32584 | 34674 |
| ATE85137.1 | MF541406_p33 | hypothetical protein | phrog_3912 | unknown function | unknown function | 1 | 25392 | 25916 |
| ATE85118.1 | MF541406_p14 | hypothetical protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 9145 | 9543 |
| ATE85132.1 | MF541406_p28 | hypothetical protein | phrog_4092 | unknown function | unknown function | 1 | 22747 | 23010 |
| ATE85174.1 | MF541406_p71 | hypothetical protein | phrog_4239 | unknown function | unknown function | -1 | 46748 | 47170 |
| ATE85176.1 | MF541406_p73 | hypothetical protein | phrog_4275 | unknown function | unknown function | -1 | 47727 | 47852 |
| ATE85178.1 | MF541406_p75 | hypothetical protein | phrog_3994 | unknown function | unknown function | -1 | 49047 | 49475 |
| ATE85171.1 | MF541406_p68 | hypothetical protein | phrog_22195 | unknown function | unknown function | -1 | 45455 | 45865 |
| ATE85122.1 | MF541406_p17 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 10933 | 11645 |
| ATE85127.1 | MF541406_p23 | hypothetical protein | phrog_4013 | unknown function | unknown function | 1 | 17351 | 19336 |
| ATE85163.1 | MF541406_p60 | hypothetical protein | phrog_4024 | unknown function | unknown function | -1 | 42641 | 43054 |
| ATE85133.1 | MF541406_p29 | hypothetical protein | phrog_4061 | unknown function | unknown function | -1 | 23065 | 23325 |