Genomic map of Vibrio phage JSF25 (MF574151)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF574151
Definition
Vibrio phage JSF25, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Chatterjeevirus; unclassified Chatterjeevirus.
DB of origin
NUCCORE
Length
38593
Host Name
Vibrio sp.
Host domain
Bacteria
Is prophage?
undef
Number of proteins
49
%GC
42.72
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASU01135.1 MF574151_p9 hypothetical protein phrog_11474 unknown function unknown function 1 6034 6225
ASU01160.1 MF574151_p34 lysin phrog_822 amidase lysis 1 22063 22497
ASU01165.1 MF574151_p39 collar / head-to-tail joining protein phrog_449 head-tail adaptor connector 1 23932 25530
ASU01149.1 MF574151_p23 hypothetical protein phrog_10848 unknown function unknown function 1 16059 16316
ASU01132.1 MF574151_p6 DNA packaging protein phrog_38 terminase large subunit head and packaging 1 2474 4234
ASU01174.1 MF574151_p48 protein inside capsid D phrog_342 internal virion protein with endolysin domain head and packaging 1 34833 38216
ASU01150.1 MF574151_p24 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 16323 18359
ASU01166.1 MF574151_p40 capsid and scaffold protein phrog_1052 head assembly head and packaging 1 25609 26469
ASU01171.1 MF574151_p45 protein inside capsid A phrog_308 internal virion protein head and packaging 1 31480 31998
ASU01130.1 MF574151_p4 hypothetical protein phrog_4712 holin lysis 1 2059 2202
ASU01139.1 MF574151_p13 hypothetical protein phrog_11350 unknown function unknown function 1 10858 11184
ASU01136.1 MF574151_p10 hypothetical protein phrog_13599 unknown function unknown function 1 6222 6422
ASU01137.1 MF574151_p11 DNA-directed RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 6816 9467
ASU01141.1 MF574151_p15 host RNA polymerase inhibitory protein phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism 1 11921 12094
ASU01163.1 MF574151_p37 host specificity protein A phrog_2746 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 23217 23624
ASU01173.1 MF574151_p47 protein inside capsid C phrog_1339 internal virion protein head and packaging 1 32643 34820
ASU01145.1 MF574151_p19 hypothetical protein phrog_11152 unknown function unknown function 1 13253 13450
ASU01157.1 MF574151_p31 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 19973 20848
ASU01162.1 MF574151_p36 hypothetical protein phrog_1391 unknown function unknown function 1 22930 23181
ASU01147.1 MF574151_p21 hypothetical protein phrog_10688 unknown function unknown function 1 15214 15528
ASU01133.1 MF574151_p7 hypothetical protein phrog_19284 unknown function unknown function 1 4481 4612
ASU01169.1 MF574151_p43 tail fiber protein / tubular protein B phrog_457 tail protein tail 1 28383 30767
ASU01148.1 MF574151_p22 hypothetical protein phrog_10620 unknown function unknown function 1 15614 16072
ASU01138.1 MF574151_p12 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 9594 10574
ASU01156.1 MF574151_p30 nucleotide reductase subunit C phrog_2294 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 19567 19980
ASU01153.1 MF574151_p27 hypothetical protein phrog_11673 unknown function unknown function 1 19043 19234
ASU01164.1 MF574151_p38 host specificity protein B phrog_10099 unknown function unknown function 1 23624 23914
ASU01140.1 MF574151_p14 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other 1 11196 11879
ASU01131.1 MF574151_p5 hypothetical protein phrog_10167 unknown function unknown function 1 2202 2399
ASU01154.1 MF574151_p28 hypothetical protein phrog_14683 unknown function unknown function 1 19188 19358
ASU01128.1 MF574151_p2 holin phrog_920 holin lysis 1 1614 1838
ASU01146.1 MF574151_p20 primase/helicase protein phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 13432 15153
ASU01170.1 MF574151_p44 deoxyribonucleoside kinase phrog_761 thymidylate kinase other 1 30855 31487
ASU01155.1 MF574151_p29 HNS binding protein phrog_1334 unknown function unknown function 1 19370 19567
ASU01172.1 MF574151_p46 protein inside capsid B phrog_805 internal virion protein head and packaging 1 31991 32575
ASU01144.1 MF574151_p18 hypothetical protein phrog_5138 unknown function unknown function 1 12753 13148
ASU01134.1 MF574151_p8 S-adenosyl-L-methionine hydrolase phrog_2226 SAM-dependent methyltransferase other 1 5482 5913
ASU01175.1 MF574151_p49 tail fibers protein singleton unknown function unknown function 1 38296 38520
ASU01142.1 MF574151_p16 hypothetical protein phrog_11648 unknown function unknown function 1 12265 12417
ASU01168.1 MF574151_p42 tail fiber protein / tubular protein A phrog_446 tail protein tail 1 27778 28371
ASU01152.1 MF574151_p26 hypothetical protein phrog_10513 unknown function unknown function 1 18664 19056
ASU01161.1 MF574151_p35 hypothetical protein phrog_1447 unknown function unknown function 1 22633 22914
ASU01143.1 MF574151_p17 hypothetical protein phrog_10197 unknown function unknown function 1 12456 12737
ASU01129.1 MF574151_p3 DNA packaging protein A phrog_1351 terminase small subunit head and packaging 1 1807 2040
ASU01151.1 MF574151_p25 hypothetical protein phrog_10985 unknown function unknown function 1 18370 18534
ASU01127.1 MF574151_p1 tail fibers protein phrog_6256 tail fiber protein tail 1 144 1592
ASU01167.1 MF574151_p41 capsid and scaffold protein phrog_267 major head protein head and packaging 1 26588 27712
ASU01158.1 MF574151_p32 ssDNA-binding protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 20940 21611
ASU01159.1 MF574151_p33 endonuclease phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 21611 22063