| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF580760 |
Definition |
Streptococcus phage 7T, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Moineauvirus; unclassified Moineauvirus. |
DB of origin |
NUCCORE |
Length |
35141 |
Host Name |
Streptococcus thermophilus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
41 |
%GC |
38.72 |
Number of singletons |
0 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATI17172.1 | MF580760_p32 | hypothetical protein | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 28544 | 28999 |
| ATI17162.1 | MF580760_p22 | holin | phrog_297 | holin | lysis | 1 | 22350 | 22592 |
| ATI17144.1 | MF580760_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2622 | 3773 |
| ATI17165.1 | MF580760_p25 | hypothetical protein | phrog_1733 | unknown function | unknown function | 1 | 24096 | 24995 |
| ATI17175.1 | MF580760_p35 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 31551 | 31874 |
| ATI17163.1 | MF580760_p23 | lysin | phrog_998 | endolysin | lysis | 1 | 22594 | 23439 |
| ATI17151.1 | MF580760_p11 | major tail protein | phrog_88 | major tail protein | tail | 1 | 7139 | 7750 |
| ATI17171.1 | MF580760_p31 | helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 27206 | 28537 |
| ATI17180.1 | MF580760_p40 | Apaf-1 related killer DARK | phrog_36 | transcriptional regulator | transcription regulation | 1 | 34004 | 34402 |
| ATI17141.1 | MF580760_p1 | terminase | phrog_83 | terminase small subunit | head and packaging | 1 | 70 | 528 |
| ATI17173.1 | MF580760_p33 | hypothetical protein | phrog_695 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 29002 | 29808 |
| ATI17166.1 | MF580760_p26 | hypothetical protein | phrog_2902 | anti-repressor | transcription regulation | 1 | 24988 | 25527 |
| ATI17179.1 | MF580760_p39 | hypothetical protein | phrog_1814 | unknown function | unknown function | 1 | 33023 | 33757 |
| ATI17146.1 | MF580760_p6 | major head protein | phrog_10 | major head protein | head and packaging | 1 | 4443 | 5636 |
| ATI17170.1 | MF580760_p30 | DNA binding protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 26701 | 27231 |
| ATI17155.1 | MF580760_p15 | receptor binding protein | phrog_588 | tail fiber protein and host specificity | tail | 1 | 14930 | 18199 |
| ATI17168.1 | MF580760_p28 | hypothetical protein | phrog_1022 | unknown function | unknown function | 1 | 25892 | 26026 |
| ATI17143.1 | MF580760_p3 | head-tail joining protein | phrog_1142 | unknown function | unknown function | 1 | 2425 | 2604 |
| ATI17157.1 | MF580760_p17 | hypothetical protein | phrog_1060 | unknown function | unknown function | 1 | 20269 | 20622 |
| ATI17160.1 | MF580760_p20 | hypothetical protein | phrog_1567 | unknown function | unknown function | 1 | 21855 | 22001 |
| ATI17169.1 | MF580760_p29 | hypothetical protein | phrog_4084 | unknown function | unknown function | 1 | 26143 | 26526 |
| ATI17153.1 | MF580760_p13 | tape measure protein | phrog_167 | tail length tape measure protein | tail | 1 | 8398 | 13368 |
| ATI17164.1 | MF580760_p24 | cro-like protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 23852 | 24055 |
| ATI17145.1 | MF580760_p5 | scaffolding protein | phrog_94 | head maturation protease | head and packaging | 1 | 3760 | 4428 |
| ATI17152.1 | MF580760_p12 | tail assembly | phrog_1346 | tail protein | tail | 1 | 7826 | 8179 |
| ATI17174.1 | MF580760_p34 | primase | phrog_864 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 29795 | 31297 |
| ATI17150.1 | MF580760_p10 | tail protein | phrog_1217 | tail protein | tail | 1 | 6749 | 7120 |
| ATI17178.1 | MF580760_p38 | hypothetical protein | phrog_4400 | unknown function | unknown function | 1 | 32375 | 33019 |
| ATI17147.1 | MF580760_p7 | DNA packaging protein | phrog_40 | head-tail adaptor Ad1 | connector | 1 | 5651 | 5965 |
| ATI17161.1 | MF580760_p21 | hypothetical protein | phrog_1296 | holin | lysis | 1 | 22019 | 22342 |
| ATI17148.1 | MF580760_p8 | capsid-tail joining protein | phrog_25 | head closure Hc1 | connector | 1 | 5965 | 6315 |
| ATI17149.1 | MF580760_p9 | head-tail joining protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 6322 | 6744 |
| ATI17176.1 | MF580760_p36 | hypothetical protein | phrog_1982 | unknown function | unknown function | 1 | 31855 | 32103 |
| ATI17159.1 | MF580760_p19 | hypothetical protein | phrog_1060 | unknown function | unknown function | 1 | 21425 | 21835 |
| ATI17177.1 | MF580760_p37 | hypothetical protein | phrog_14905 | unknown function | unknown function | 1 | 32088 | 32366 |
| ATI17158.1 | MF580760_p18 | minor structural protein | phrog_16877 | minor tail protein | tail | 1 | 20684 | 21403 |
| ATI17156.1 | MF580760_p16 | accessory baseplate protein | phrog_372 | tail protein | tail | 1 | 18199 | 20247 |
| ATI17167.1 | MF580760_p27 | cro-like repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 25649 | 25858 |
| ATI17154.1 | MF580760_p14 | distal tail protein | phrog_202 | distal tail protein Dit | tail | 1 | 13365 | 14930 |
| ATI17142.1 | MF580760_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 658 | 2421 |
| ATI17181.1 | MF580760_p41 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 34513 | 35031 |