| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF580761 |
Definition |
Streptococcus phage 9A, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Moineauvirus; unclassified Moineauvirus. |
DB of origin |
NUCCORE |
Length |
35604 |
Host Name |
Streptococcus thermophilus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
41 |
%GC |
38.96 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATI19576.1 | MF580761_p25 | hypothetical protein | phrog_25846 | unknown function | unknown function | 1 | 24704 | 25021 |
| ATI19570.1 | MF580761_p19 | hypothetical protein | phrog_1567 | unknown function | unknown function | 1 | 20839 | 20985 |
| ATI19575.1 | MF580761_p24 | hypothetical protein | phrog_7237 | unknown function | unknown function | 1 | 23611 | 24282 |
| ATI19565.1 | MF580761_p14 | tape measure protein | phrog_167 | tail length tape measure protein | tail | 1 | 8651 | 13426 |
| ATI19553.1 | MF580761_p2 | terminase | phrog_4914 | terminase large subunit | head and packaging | 1 | 786 | 1475 |
| ATI19591.1 | MF580761_p40 | Apaf-1 related killer DARK | phrog_36 | transcriptional regulator | transcription regulation | 1 | 34481 | 34879 |
| ATI19579.1 | MF580761_p28 | hypothetical protein | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 26117 | 26590 |
| ATI19592.1 | MF580761_p41 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 34989 | 35498 |
| ATI19558.1 | MF580761_p7 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4699 | 5892 |
| ATI19573.1 | MF580761_p22 | lysin | phrog_998 | endolysin | lysis | 1 | 21574 | 22419 |
| ATI19581.1 | MF580761_p30 | helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 27263 | 28594 |
| ATI19563.1 | MF580761_p12 | major tail protein | phrog_88 | major tail protein | tail | 1 | 7395 | 8003 |
| ATI19562.1 | MF580761_p11 | tail protein | phrog_1217 | tail protein | tail | 1 | 7005 | 7376 |
| ATI19584.1 | MF580761_p33 | primase | phrog_864 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 29861 | 31375 |
| ATI19585.1 | MF580761_p34 | hypothetical protein | phrog_9118 | unknown function | unknown function | 1 | 31628 | 32059 |
| ATI19582.1 | MF580761_p31 | hypothetical protein | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 28601 | 29056 |
| ATI19577.1 | MF580761_p26 | cro-like protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 25340 | 25543 |
| ATI19568.1 | MF580761_p17 | minor structural protein | phrog_372 | tail protein | tail | 1 | 18332 | 20368 |
| ATI19587.1 | MF580761_p36 | hypothetical protein | phrog_1982 | unknown function | unknown function | 1 | 32345 | 32593 |
| ATI19583.1 | MF580761_p32 | hypothetical protein | phrog_695 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 29059 | 29874 |
| ATI19561.1 | MF580761_p10 | head-tail joining protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 6578 | 7000 |
| ATI19569.1 | MF580761_p18 | hypothetical protein | phrog_1060 | unknown function | unknown function | 1 | 20385 | 20813 |
| ATI19559.1 | MF580761_p8 | DNA packaging protein | phrog_40 | head-tail adaptor Ad1 | connector | 1 | 5907 | 6221 |
| ATI19552.1 | MF580761_p1 | terminase | phrog_83 | terminase small subunit | head and packaging | 1 | 284 | 745 |
| ATI19590.1 | MF580761_p39 | hypothetical protein | phrog_1814 | unknown function | unknown function | 1 | 33320 | 34027 |
| ATI19560.1 | MF580761_p9 | capsid-tail joining protein | phrog_25 | head closure Hc1 | connector | 1 | 6221 | 6571 |
| ATI19572.1 | MF580761_p21 | holin | phrog_297 | holin | lysis | 1 | 21330 | 21572 |
| ATI19589.1 | MF580761_p38 | hypothetical protein | phrog_884 | unknown function | unknown function | 1 | 33014 | 33316 |
| ATI19556.1 | MF580761_p5 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2868 | 4028 |
| ATI19564.1 | MF580761_p13 | tail assembly | phrog_1346 | tail protein | tail | 1 | 8079 | 8432 |
| ATI19578.1 | MF580761_p27 | hypothetical protein | phrog_1022 | unknown function | unknown function | 1 | 25702 | 25842 |
| ATI19588.1 | MF580761_p37 | DNA binding protein | phrog_1994 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 32578 | 33045 |
| ATI19566.1 | MF580761_p15 | distal tail protein | phrog_202 | distal tail protein Dit | tail | 1 | 13432 | 14988 |
| ATI19586.1 | MF580761_p35 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 32041 | 32364 |
| ATI19554.1 | MF580761_p3 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 1558 | 2667 |
| ATI19557.1 | MF580761_p6 | peptidase | phrog_94 | head maturation protease | head and packaging | 1 | 4015 | 4683 |
| ATI19580.1 | MF580761_p29 | nucleoside triphosphate binding motifs protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 26587 | 27288 |
| ATI19574.1 | MF580761_p23 | hypothetical protein | phrog_4964 | unknown function | unknown function | 1 | 22947 | 23498 |
| ATI19567.1 | MF580761_p16 | hypothetical protein | phrog_588 | tail fiber protein and host specificity | tail | 1 | 14988 | 18332 |
| ATI19571.1 | MF580761_p20 | hypothetical protein | phrog_1296 | holin | lysis | 1 | 20999 | 21322 |
| ATI19555.1 | MF580761_p4 | head-tail joining protein | phrog_1142 | unknown function | unknown function | 1 | 2671 | 2850 |