| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF580768 |
Definition |
Streptococcus phage C0, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Moineauvirus; unclassified Moineauvirus. |
DB of origin |
NUCCORE |
Length |
34718 |
Host Name |
Streptococcus thermophilus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
42 |
%GC |
38.95 |
Number of singletons |
1 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATI19840.1 | MF580768_p40 | hypothetical protein | singleton | unknown function | unknown function | 1 | 32958 | 33137 |
| ATI19819.1 | MF580768_p19 | hypothetical protein | phrog_1296 | holin | lysis | 1 | 20869 | 21192 |
| ATI19821.1 | MF580768_p21 | lysin | phrog_998 | endolysin | lysis | 1 | 21433 | 22278 |
| ATI19827.1 | MF580768_p27 | hypothetical protein | phrog_3159 | unknown function | unknown function | 1 | 26059 | 26256 |
| ATI19808.1 | MF580768_p8 | capsid-tail joining protein | phrog_25 | head closure Hc1 | connector | 1 | 5980 | 6330 |
| ATI19809.1 | MF580768_p9 | head-tail joining protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 6337 | 6759 |
| ATI19817.1 | MF580768_p17 | hypothetical protein | phrog_1060 | unknown function | unknown function | 1 | 20275 | 20685 |
| ATI19829.1 | MF580768_p29 | Erf protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 26733 | 27383 |
| ATI19839.1 | MF580768_p39 | Apaf-1 related killer DARK | phrog_36 | transcriptional regulator | transcription regulation | 1 | 32680 | 32949 |
| ATI19806.1 | MF580768_p6 | major head protein | phrog_10 | major head protein | head and packaging | 1 | 4458 | 5651 |
| ATI19834.1 | MF580768_p34 | hypothetical protein | phrog_1982 | unknown function | unknown function | 1 | 29933 | 30169 |
| ATI19801.1 | MF580768_p1 | terminase | phrog_83 | terminase small subunit | head and packaging | 1 | 88 | 546 |
| ATI19823.1 | MF580768_p23 | antirepressor | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 23042 | 23791 |
| ATI19836.1 | MF580768_p36 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 30367 | 30867 |
| ATI19835.1 | MF580768_p35 | hypothetical protein | phrog_1489 | unknown function | unknown function | 1 | 30211 | 30366 |
| ATI19833.1 | MF580768_p33 | endodeoxyribonuclease | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 29475 | 29936 |
| ATI19824.1 | MF580768_p24 | hypothetical protein | phrog_1022 | unknown function | unknown function | 1 | 23984 | 24130 |
| ATI19812.1 | MF580768_p12 | tail protein | phrog_1346 | tail protein | tail | 1 | 7841 | 8194 |
| ATI19822.1 | MF580768_p22 | cro repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 22796 | 23023 |
| ATI19807.1 | MF580768_p7 | DNA packaging protein | phrog_40 | head-tail adaptor Ad1 | connector | 1 | 5666 | 5980 |
| ATI19810.1 | MF580768_p10 | tail protein | phrog_1217 | tail protein | tail | 1 | 6764 | 7135 |
| ATI19825.1 | MF580768_p25 | replisome organizer | phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 24357 | 25268 |
| ATI19831.1 | MF580768_p31 | hypothetical protein | phrog_4400 | unknown function | unknown function | 1 | 28357 | 29001 |
| ATI19832.1 | MF580768_p32 | ssDNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 29020 | 29466 |
| ATI19828.1 | MF580768_p28 | hypothetical protein | phrog_3159 | unknown function | unknown function | 1 | 26441 | 26623 |
| ATI19826.1 | MF580768_p26 | helicase | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 25280 | 26062 |
| ATI19842.1 | MF580768_p42 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 34107 | 34625 |
| ATI19830.1 | MF580768_p30 | hypothetical protein | phrog_674 | unknown function | unknown function | 1 | 27386 | 28348 |
| ATI19815.1 | MF580768_p15 | receptor binding protein | phrog_588 | tail fiber protein and host specificity | tail | 1 | 14936 | 18205 |
| ATI19816.1 | MF580768_p16 | accessory baseplate protein | phrog_372 | tail protein | tail | 1 | 18205 | 20253 |
| ATI19820.1 | MF580768_p20 | holin | phrog_297 | holin | lysis | 1 | 21189 | 21431 |
| ATI19804.1 | MF580768_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2637 | 3788 |
| ATI19814.1 | MF580768_p14 | distal tail protein | phrog_202 | distal tail protein Dit | tail | 1 | 13380 | 14936 |
| ATI19802.1 | MF580768_p2 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 559 | 2436 |
| ATI19838.1 | MF580768_p38 | hypothetical protein | phrog_1814 | unknown function | unknown function | 1 | 31420 | 32220 |
| ATI19803.1 | MF580768_p3 | head-tail joining protein | phrog_1142 | unknown function | unknown function | 1 | 2440 | 2619 |
| ATI19837.1 | MF580768_p37 | DNA binding protein | phrog_1994 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 30868 | 31380 |
| ATI19841.1 | MF580768_p41 | Apaf-1 related killer DARK | phrog_36 | transcriptional regulator | transcription regulation | 1 | 33598 | 33996 |
| ATI19813.1 | MF580768_p13 | tape measure protein | phrog_167 | tail length tape measure protein | tail | 1 | 8413 | 13383 |
| ATI19818.1 | MF580768_p18 | hypothetical protein | phrog_1567 | unknown function | unknown function | 1 | 20705 | 20851 |
| ATI19811.1 | MF580768_p11 | major tail protein | phrog_88 | major tail protein | tail | 1 | 7154 | 7765 |
| ATI19805.1 | MF580768_p5 | scaffolding protein | phrog_94 | head maturation protease | head and packaging | 1 | 3775 | 4443 |