Genomic map of Streptococcus phage C0 (MF580768)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF580768
Definition
Streptococcus phage C0, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Moineauvirus; unclassified Moineauvirus.
DB of origin
NUCCORE
Length
34718
Host Name
Streptococcus thermophilus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
42
%GC
38.95
Number of singletons
1
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATI19840.1 MF580768_p40 hypothetical protein singleton unknown function unknown function 1 32958 33137
ATI19819.1 MF580768_p19 hypothetical protein phrog_1296 holin lysis 1 20869 21192
ATI19821.1 MF580768_p21 lysin phrog_998 endolysin lysis 1 21433 22278
ATI19827.1 MF580768_p27 hypothetical protein phrog_3159 unknown function unknown function 1 26059 26256
ATI19808.1 MF580768_p8 capsid-tail joining protein phrog_25 head closure Hc1 connector 1 5980 6330
ATI19809.1 MF580768_p9 head-tail joining protein phrog_5 tail completion or Neck1 protein connector 1 6337 6759
ATI19817.1 MF580768_p17 hypothetical protein phrog_1060 unknown function unknown function 1 20275 20685
ATI19829.1 MF580768_p29 Erf protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 26733 27383
ATI19839.1 MF580768_p39 Apaf-1 related killer DARK phrog_36 transcriptional regulator transcription regulation 1 32680 32949
ATI19806.1 MF580768_p6 major head protein phrog_10 major head protein head and packaging 1 4458 5651
ATI19834.1 MF580768_p34 hypothetical protein phrog_1982 unknown function unknown function 1 29933 30169
ATI19801.1 MF580768_p1 terminase phrog_83 terminase small subunit head and packaging 1 88 546
ATI19823.1 MF580768_p23 antirepressor phrog_63 anti-repressor Ant transcription regulation 1 23042 23791
ATI19836.1 MF580768_p36 hypothetical protein phrog_121 unknown function unknown function 1 30367 30867
ATI19835.1 MF580768_p35 hypothetical protein phrog_1489 unknown function unknown function 1 30211 30366
ATI19833.1 MF580768_p33 endodeoxyribonuclease phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 29475 29936
ATI19824.1 MF580768_p24 hypothetical protein phrog_1022 unknown function unknown function 1 23984 24130
ATI19812.1 MF580768_p12 tail protein phrog_1346 tail protein tail 1 7841 8194
ATI19822.1 MF580768_p22 cro repressor phrog_3 transcriptional repressor transcription regulation 1 22796 23023
ATI19807.1 MF580768_p7 DNA packaging protein phrog_40 head-tail adaptor Ad1 connector 1 5666 5980
ATI19810.1 MF580768_p10 tail protein phrog_1217 tail protein tail 1 6764 7135
ATI19825.1 MF580768_p25 replisome organizer phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 24357 25268
ATI19831.1 MF580768_p31 hypothetical protein phrog_4400 unknown function unknown function 1 28357 29001
ATI19832.1 MF580768_p32 ssDNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 29020 29466
ATI19828.1 MF580768_p28 hypothetical protein phrog_3159 unknown function unknown function 1 26441 26623
ATI19826.1 MF580768_p26 helicase phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 25280 26062
ATI19842.1 MF580768_p42 HNH endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 34107 34625
ATI19830.1 MF580768_p30 hypothetical protein phrog_674 unknown function unknown function 1 27386 28348
ATI19815.1 MF580768_p15 receptor binding protein phrog_588 tail fiber protein and host specificity tail 1 14936 18205
ATI19816.1 MF580768_p16 accessory baseplate protein phrog_372 tail protein tail 1 18205 20253
ATI19820.1 MF580768_p20 holin phrog_297 holin lysis 1 21189 21431
ATI19804.1 MF580768_p4 portal protein phrog_12 portal protein head and packaging 1 2637 3788
ATI19814.1 MF580768_p14 distal tail protein phrog_202 distal tail protein Dit tail 1 13380 14936
ATI19802.1 MF580768_p2 terminase phrog_9 terminase large subunit head and packaging 1 559 2436
ATI19838.1 MF580768_p38 hypothetical protein phrog_1814 unknown function unknown function 1 31420 32220
ATI19803.1 MF580768_p3 head-tail joining protein phrog_1142 unknown function unknown function 1 2440 2619
ATI19837.1 MF580768_p37 DNA binding protein phrog_1994 DNA binding protein DNA, RNA and nucleotide metabolism 1 30868 31380
ATI19841.1 MF580768_p41 Apaf-1 related killer DARK phrog_36 transcriptional regulator transcription regulation 1 33598 33996
ATI19813.1 MF580768_p13 tape measure protein phrog_167 tail length tape measure protein tail 1 8413 13383
ATI19818.1 MF580768_p18 hypothetical protein phrog_1567 unknown function unknown function 1 20705 20851
ATI19811.1 MF580768_p11 major tail protein phrog_88 major tail protein tail 1 7154 7765
ATI19805.1 MF580768_p5 scaffolding protein phrog_94 head maturation protease head and packaging 1 3775 4443