Genomic map of Streptococcus phage L5A1 (MF580769)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF580769
Definition
Streptococcus phage L5A1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Moineauvirus; unclassified Moineauvirus.
DB of origin
NUCCORE
Length
36884
Host Name
Streptococcus thermophilus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
44
%GC
38.85
Number of singletons
1
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATI19872.1 MF580769_p30 hypothetical protein phrog_3159 unknown function unknown function 1 29142 29339
ATI19849.1 MF580769_p7 DNA packaging protein phrog_40 head-tail adaptor Ad1 connector 1 5666 5980
ATI19844.1 MF580769_p2 terminase phrog_9 terminase large subunit head and packaging 1 559 2436
ATI19876.1 MF580769_p34 hypothetical protein phrog_24565 unknown function unknown function 1 31758 32084
ATI19870.1 MF580769_p28 replisome organizer phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 27439 28350
ATI19868.1 MF580769_p26 antirepressor phrog_63 anti-repressor Ant transcription regulation 1 26123 26872
ATI19874.1 MF580769_p32 Erf protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 29816 30466
ATI19851.1 MF580769_p9 head-tail joining protein phrog_5 tail completion or Neck1 protein connector 1 6337 6759
ATI19855.1 MF580769_p13 tape measure protein phrog_167 tail length tape measure protein tail 1 8414 13384
ATI19858.1 MF580769_p16 accessory baseplate protein phrog_202 distal tail protein Dit tail 1 16695 18017
ATI19871.1 MF580769_p29 helicase phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 28363 29145
ATI19863.1 MF580769_p21 hypothetical protein phrog_1296 holin lysis 1 23950 24273
ATI19859.1 MF580769_p17 hypothetical protein phrog_588 tail fiber protein and host specificity tail 1 18017 21286
ATI19884.1 MF580769_p42 hypothetical protein phrog_1814 unknown function unknown function 1 34503 35303
ATI19886.1 MF580769_p44 HNH endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 36272 36790
ATI19843.1 MF580769_p1 terminase phrog_83 terminase small subunit head and packaging 1 88 546
ATI19875.1 MF580769_p33 hypothetical protein phrog_674 unknown function unknown function 1 30469 31431
ATI19848.1 MF580769_p6 major capsid protein phrog_10 major head protein head and packaging 1 4458 5651
ATI19880.1 MF580769_p38 hypothetical protein phrog_1489 unknown function unknown function 1 33294 33449
ATI19860.1 MF580769_p18 minor structural protein phrog_372 tail protein tail 1 21286 23334
ATI19877.1 MF580769_p35 ssDNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 32103 32549
ATI19846.1 MF580769_p4 portal protein phrog_12 portal protein head and packaging 1 2637 3788
ATI19853.1 MF580769_p11 major tail protein phrog_88 major tail protein tail 1 7156 7767
ATI19854.1 MF580769_p12 tail protein phrog_1346 tail protein tail 1 7842 8195
ATI19857.1 MF580769_p15 host specificity protein phrog_6253 minor tail protein tail 1 14937 16643
ATI19864.1 MF580769_p22 holin phrog_297 holin lysis 1 24270 24512
ATI19879.1 MF580769_p37 hypothetical protein phrog_1982 unknown function unknown function 1 33016 33252
ATI19885.1 MF580769_p43 Apaf-1 related killer DARK phrog_36 transcriptional regulator transcription regulation 1 35763 36161
ATI19865.1 MF580769_p23 lysin phrog_998 endolysin lysis 1 24514 25359
ATI19883.1 MF580769_p41 hypothetical protein phrog_32319 unknown function unknown function 1 34432 34560
ATI19878.1 MF580769_p36 endodeoxyribonuclease phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 32558 33019
ATI19861.1 MF580769_p19 hypothetical protein phrog_1060 unknown function unknown function 1 23356 23766
ATI19845.1 MF580769_p3 head-tail joining protein phrog_1142 unknown function unknown function 1 2440 2619
ATI19852.1 MF580769_p10 tail protein phrog_1217 tail protein tail 1 6764 7135
ATI19866.1 MF580769_p24 hypothetical protein singleton unknown function unknown function -1 25553 25723
ATI19847.1 MF580769_p5 scaffolding protein phrog_94 head maturation protease head and packaging 1 3775 4443
ATI19850.1 MF580769_p8 capsid-tail joining protein phrog_25 head closure Hc1 connector 1 5980 6330
ATI19873.1 MF580769_p31 hypothetical protein phrog_3159 unknown function unknown function 1 29524 29706
ATI19867.1 MF580769_p25 cro repressor phrog_3 transcriptional repressor transcription regulation 1 25877 26104
ATI19856.1 MF580769_p14 distal tail protein phrog_202 distal tail protein Dit tail 1 13381 14937
ATI19862.1 MF580769_p20 hypothetical protein phrog_1567 unknown function unknown function 1 23786 23932
ATI19882.1 MF580769_p40 DNA binding protein phrog_1994 DNA binding protein DNA, RNA and nucleotide metabolism 1 33951 34463
ATI19881.1 MF580769_p39 hypothetical protein phrog_121 unknown function unknown function 1 33450 33950
ATI19869.1 MF580769_p27 hypothetical protein phrog_1022 unknown function unknown function 1 27065 27211