| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF580770 |
Definition |
Streptococcus phage M19, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Moineauvirus; unclassified Moineauvirus. |
DB of origin |
NUCCORE |
Length |
34328 |
Host Name |
Streptococcus thermophilus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
44 |
%GC |
38.86 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATI19894.1 | MF580770_p8 | DNA packaging protein | phrog_40 | head-tail adaptor Ad1 | connector | 1 | 5710 | 6024 |
| ATI19927.1 | MF580770_p41 | hypothetical protein | phrog_884 | unknown function | unknown function | 1 | 31395 | 31697 |
| ATI19928.1 | MF580770_p42 | hypothetical protein | phrog_1814 | unknown function | unknown function | 1 | 31701 | 32408 |
| ATI19919.1 | MF580770_p33 | ssDNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 28368 | 28814 |
| ATI19891.1 | MF580770_p5 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2672 | 3832 |
| ATI19917.1 | MF580770_p31 | nuclease | phrog_1227 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 26833 | 27669 |
| ATI19908.1 | MF580770_p22 | lysin | phrog_998 | endolysin | lysis | 1 | 20701 | 21546 |
| ATI19889.1 | MF580770_p3 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 1452 | 2471 |
| ATI19898.1 | MF580770_p12 | major tail protein | phrog_88 | major tail protein | tail | 1 | 7198 | 7806 |
| ATI19900.1 | MF580770_p14 | tape measure protein | phrog_167 | tail length tape measure protein | tail | 1 | 8452 | 13227 |
| ATI19925.1 | MF580770_p39 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 30413 | 30913 |
| ATI19902.1 | MF580770_p16 | receptor binding protein | phrog_588 | tail fiber protein and host specificity | tail | 1 | 14780 | 17500 |
| ATI19911.1 | MF580770_p25 | antirepressor protein | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 22641 | 23387 |
| ATI19906.1 | MF580770_p20 | hypothetical protein | phrog_1296 | holin | lysis | 1 | 20125 | 20448 |
| ATI19888.1 | MF580770_p2 | terminase large subunit | phrog_4914 | terminase large subunit | head and packaging | 1 | 590 | 1279 |
| ATI19893.1 | MF580770_p7 | major head protein | phrog_10 | major head protein | head and packaging | 1 | 4502 | 5695 |
| ATI19921.1 | MF580770_p35 | hypothetical protein | phrog_1982 | unknown function | unknown function | 1 | 29290 | 29532 |
| ATI19920.1 | MF580770_p34 | endodeoxyribonuclease | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 28832 | 29293 |
| ATI19930.1 | MF580770_p44 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 33377 | 33871 |
| ATI19887.1 | MF580770_p1 | terminase | phrog_83 | terminase small subunit | head and packaging | 1 | 88 | 549 |
| ATI19895.1 | MF580770_p9 | capsid-tail joining protein | phrog_25 | head closure Hc1 | connector | 1 | 6024 | 6374 |
| ATI19907.1 | MF580770_p21 | holin | phrog_297 | holin | lysis | 1 | 20457 | 20699 |
| ATI19905.1 | MF580770_p19 | hypothetical protein | phrog_1567 | unknown function | unknown function | 1 | 19961 | 20107 |
| ATI19909.1 | MF580770_p23 | cro repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 22157 | 22384 |
| ATI19899.1 | MF580770_p13 | tail protein | phrog_1346 | tail protein | tail | 1 | 7880 | 8233 |
| ATI19915.1 | MF580770_p29 | hypothetical protein | phrog_3159 | unknown function | unknown function | 1 | 25691 | 25888 |
| ATI19896.1 | MF580770_p10 | head-tail joining protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 6381 | 6803 |
| ATI19890.1 | MF580770_p4 | head-tail joining protein | phrog_1142 | unknown function | unknown function | 1 | 2475 | 2654 |
| ATI19897.1 | MF580770_p11 | tail protein | phrog_1217 | tail protein | tail | 1 | 6808 | 7179 |
| ATI19929.1 | MF580770_p43 | Apaf-1 related killer DARK | phrog_36 | transcriptional regulator | transcription regulation | 1 | 32868 | 33266 |
| ATI19913.1 | MF580770_p27 | replication protein | phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 24093 | 24899 |
| ATI19903.1 | MF580770_p17 | accessory baseplate protein | phrog_372 | tail protein | tail | 1 | 17503 | 19515 |
| ATI19912.1 | MF580770_p26 | hypothetical protein | phrog_1022 | unknown function | unknown function | 1 | 23579 | 23770 |
| ATI19904.1 | MF580770_p18 | hypothetical protein | phrog_1060 | unknown function | unknown function | 1 | 19531 | 19941 |
| ATI19916.1 | MF580770_p30 | recombinase | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 26013 | 26831 |
| ATI19914.1 | MF580770_p28 | helicase | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 24912 | 25694 |
| ATI19901.1 | MF580770_p15 | distal tail protein | phrog_202 | distal tail protein Dit | tail | 1 | 13224 | 14780 |
| ATI19924.1 | MF580770_p38 | hypothetical protein | phrog_478 | site-specific recombination directionality factor RDF | integration and excision | 1 | 30018 | 30401 |
| ATI19923.1 | MF580770_p37 | hypothetical protein | phrog_36153 | unknown function | unknown function | 1 | 29672 | 29989 |
| ATI19910.1 | MF580770_p24 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22402 | 22533 |
| ATI19918.1 | MF580770_p32 | hypothetical protein | phrog_4400 | unknown function | unknown function | 1 | 27709 | 28353 |
| ATI19922.1 | MF580770_p36 | hypothetical protein | phrog_1489 | unknown function | unknown function | 1 | 29517 | 29675 |
| ATI19892.1 | MF580770_p6 | scaffolding protein | phrog_94 | head maturation protease | head and packaging | 1 | 3819 | 4487 |
| ATI19926.1 | MF580770_p40 | DNA binding protein | phrog_1994 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 30914 | 31426 |