Genomic map of Streptococcus phage STP1 (MF580773)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF580773
Definition
Streptococcus phage STP1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Moineauvirus; unclassified Moineauvirus.
DB of origin
NUCCORE
Length
35283
Host Name
Streptococcus thermophilus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
41
%GC
38.49
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATI20025.1 MF580773_p15 receptor binding protein phrog_588 tail fiber protein and host specificity tail 1 14957 18235
ATI20045.1 MF580773_p35 ssDNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 30685 31131
ATI20048.1 MF580773_p38 DNA binding protein phrog_1994 DNA binding protein DNA, RNA and nucleotide metabolism 1 32534 33046
ATI20020.1 MF580773_p10 tail protein phrog_1217 tail protein tail 1 6775 7146
ATI20039.1 MF580773_p29 DNA helicase loader phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 26945 27727
ATI20011.1 MF580773_p1 terminase small subunit phrog_83 terminase small subunit head and packaging 1 87 545
ATI20041.1 MF580773_p31 hypothetical protein phrog_3159 unknown function unknown function 1 28106 28288
ATI20014.1 MF580773_p4 portal protein phrog_12 portal protein head and packaging 1 2639 3799
ATI20033.1 MF580773_p23 cro-like protein phrog_3 transcriptional repressor transcription regulation 1 23616 23819
ATI20019.1 MF580773_p9 head-tail joining protein phrog_5 tail completion or Neck1 protein connector 1 6348 6770
ATI20031.1 MF580773_p21 endonuclease phrog_9496 endonuclease DNA, RNA and nucleotide metabolism 1 22256 22441
ATI20028.1 MF580773_p18 hypothetical protein phrog_1296 holin lysis 1 20871 21194
ATI20013.1 MF580773_p3 head-tail joining protein phrog_1142 unknown function unknown function 1 2442 2621
ATI20030.1 MF580773_p20 lysin phrog_998 endolysin lysis 1 21446 22048
ATI20022.1 MF580773_p12 tail protein phrog_1346 tail protein tail 1 7853 8206
ATI20023.1 MF580773_p13 tail tape measure protein phrog_167 tail length tape measure protein tail 1 8425 13395
ATI20012.1 MF580773_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 552 2438
ATI20049.1 MF580773_p39 hypothetical protein phrog_1814 unknown function unknown function 1 33086 33886
ATI20050.1 MF580773_p40 Apaf-1 related killer DARK late transcriptional regulator phrog_36 transcriptional regulator transcription regulation 1 34142 34561
ATI20035.1 MF580773_p25 antirepressor phrog_2902 anti-repressor transcription regulation 1 24797 25339
ATI20015.1 MF580773_p5 scaffolding protein phrog_94 head maturation protease head and packaging 1 3786 4454
ATI20018.1 MF580773_p8 head-tail joining protein phrog_25 head closure Hc1 connector 1 5991 6341
ATI20037.1 MF580773_p27 hypothetical protein phrog_1022 unknown function unknown function 1 25705 25839
ATI20046.1 MF580773_p36 resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 31140 31601
ATI20017.1 MF580773_p7 DNA packaging protein phrog_40 head-tail adaptor Ad1 connector 1 5677 5991
ATI20047.1 MF580773_p37 hypothetical protein phrog_121 unknown function unknown function 1 32033 32533
ATI20034.1 MF580773_p24 hypothetical protein phrog_1733 unknown function unknown function 1 23860 24804
ATI20036.1 MF580773_p26 cro-like repressor phrog_3 transcriptional repressor transcription regulation 1 25462 25677
ATI20024.1 MF580773_p14 distal tail protein phrog_202 distal tail protein Dit tail 1 13401 14957
ATI20038.1 MF580773_p28 replication initiation protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 26064 26933
ATI20032.1 MF580773_p22 lysin phrog_4238 endolysin lysis 1 22508 22735
ATI20021.1 MF580773_p11 major tail protein phrog_88 major tail protein tail 1 7167 7778
ATI20051.1 MF580773_p41 HNH endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 34666 35190
ATI20044.1 MF580773_p34 hypothetical protein phrog_4400 unknown function unknown function 1 30022 30666
ATI20040.1 MF580773_p30 hypothetical protein phrog_3159 unknown function unknown function 1 27724 27921
ATI20029.1 MF580773_p19 holin phrog_297 holin lysis 1 21202 21444
ATI20026.1 MF580773_p16 accessory baseplate protein phrog_372 tail protein tail 1 18235 20283
ATI20043.1 MF580773_p33 hypothetical protein phrog_674 unknown function unknown function 1 29051 30013
ATI20016.1 MF580773_p6 major capsid protein phrog_10 major head protein head and packaging 1 4469 5662
ATI20027.1 MF580773_p17 hypothetical protein phrog_1060 unknown function unknown function 1 20305 20700
ATI20042.1 MF580773_p32 ssDNA-binding protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 28416 29048