Genomic map of Streptococcus phage STP2 (MF580774)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF580774
Definition
Streptococcus phage STP2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Moineauvirus; unclassified Moineauvirus.
DB of origin
NUCCORE
Length
35286
Host Name
Streptococcus thermophilus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
44
%GC
38.45
Number of singletons
2
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATI20079.1 MF580774_p28 replication initiation protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 26080 26937
ATI20095.1 MF580774_p44 HNH endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 34761 35195
ATI20091.1 MF580774_p40 hypothetical protein phrog_121 unknown function unknown function 1 32038 32538
ATI20075.1 MF580774_p24 cro-like protein phrog_3 transcriptional repressor transcription regulation 1 23632 23835
ATI20086.1 MF580774_p35 hypothetical protein phrog_4400 unknown function unknown function 1 30027 30671
ATI20065.1 MF580774_p14 distal tail protein phrog_202 distal tail protein Dit tail 1 13389 14945
ATI20064.1 MF580774_p13 tail tape measure protein phrog_167 tail length tape measure protein tail 1 8413 13383
ATI20054.1 MF580774_p3 head-tail joining protein phrog_1142 unknown function unknown function 1 2430 2609
ATI20094.1 MF580774_p43 Apaf-1 related killer DARK late transcriptional regulator phrog_36 transcriptional regulator transcription regulation 1 34147 34566
ATI20085.1 MF580774_p34 hypothetical protein phrog_674 unknown function unknown function 1 29056 30018
ATI20063.1 MF580774_p12 tail protein phrog_1346 tail protein tail 1 7841 8194
ATI20081.1 MF580774_p30 hypothetical protein phrog_3159 unknown function unknown function 1 27729 27926
ATI20090.1 MF580774_p39 hypothetical protein phrog_1489 unknown function unknown function 1 31881 32051
ATI20066.1 MF580774_p15 receptor binding protein phrog_588 tail fiber protein and host specificity tail 1 14945 18223
ATI20092.1 MF580774_p41 DNA binding protein phrog_1994 DNA binding protein DNA, RNA and nucleotide metabolism 1 32539 33051
ATI20071.1 MF580774_p20 holin phrog_297 holin lysis 1 21216 21458
ATI20082.1 MF580774_p31 helicase singleton unknown function unknown function 1 28016 28114
ATI20062.1 MF580774_p11 major tail protein phrog_88 major tail protein tail 1 7155 7766
ATI20056.1 MF580774_p5 scaffolding protein phrog_94 head maturation protease head and packaging 1 3774 4442
ATI20055.1 MF580774_p4 portal protein phrog_12 portal protein head and packaging 1 2627 3787
ATI20061.1 MF580774_p10 tail protein phrog_1217 tail protein tail 1 6763 7134
ATI20078.1 MF580774_p27 cro-like repressor phrog_3 transcriptional repressor transcription regulation 1 25478 25693
ATI20072.1 MF580774_p21 lysin phrog_998 endolysin lysis 1 21460 22062
ATI20053.1 MF580774_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 540 2426
ATI20067.1 MF580774_p16 accessory baseplate protein phrog_372 tail protein tail 1 18223 20271
ATI20052.1 MF580774_p1 terminase small subunit phrog_83 terminase small subunit head and packaging 1 75 533
ATI20060.1 MF580774_p9 head-tail joining protein phrog_5 tail completion or Neck1 protein connector 1 6336 6758
ATI20093.1 MF580774_p42 hypothetical protein phrog_1814 unknown function unknown function 1 33091 33891
ATI20068.1 MF580774_p17 hypothetical protein phrog_1060 unknown function unknown function 1 20293 20703
ATI20076.1 MF580774_p25 hypothetical protein phrog_1733 unknown function unknown function 1 23876 24820
ATI20080.1 MF580774_p29 DNA helicase loader phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 26950 27732
ATI20057.1 MF580774_p6 major capsid protein phrog_10 major head protein head and packaging 1 4457 5650
ATI20088.1 MF580774_p37 resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 31145 31606
ATI20084.1 MF580774_p33 ssDNA-binding protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 28421 29053
ATI20077.1 MF580774_p26 hypothetical protein phrog_2902 anti-repressor transcription regulation 1 24813 25355
ATI20058.1 MF580774_p7 DNA packaging protein phrog_40 head-tail adaptor Ad1 connector 1 5665 5979
ATI20074.1 MF580774_p23 lysin phrog_4238 endolysin lysis 1 22522 22749
ATI20083.1 MF580774_p32 hypothetical protein phrog_3159 unknown function unknown function 1 28111 28293
ATI20070.1 MF580774_p19 hypothetical protein phrog_1296 holin lysis 1 20912 21208
ATI20087.1 MF580774_p36 ssDNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 30690 31136
ATI20089.1 MF580774_p38 hypothetical protein phrog_1982 unknown function unknown function 1 31603 31839
ATI20069.1 MF580774_p18 hypothetical protein phrog_1567 unknown function unknown function 1 20723 20869
ATI20059.1 MF580774_p8 head-tail joining protein phrog_25 head closure Hc1 connector 1 5979 6329
ATI20073.1 MF580774_p22 hypothetical protein singleton unknown function unknown function 1 22286 22435