| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF580774 |
Definition |
Streptococcus phage STP2, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Moineauvirus; unclassified Moineauvirus. |
DB of origin |
NUCCORE |
Length |
35286 |
Host Name |
Streptococcus thermophilus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
44 |
%GC |
38.45 |
Number of singletons |
2 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATI20079.1 | MF580774_p28 | replication initiation protein | phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 26080 | 26937 |
| ATI20095.1 | MF580774_p44 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 34761 | 35195 |
| ATI20091.1 | MF580774_p40 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 32038 | 32538 |
| ATI20075.1 | MF580774_p24 | cro-like protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 23632 | 23835 |
| ATI20086.1 | MF580774_p35 | hypothetical protein | phrog_4400 | unknown function | unknown function | 1 | 30027 | 30671 |
| ATI20065.1 | MF580774_p14 | distal tail protein | phrog_202 | distal tail protein Dit | tail | 1 | 13389 | 14945 |
| ATI20064.1 | MF580774_p13 | tail tape measure protein | phrog_167 | tail length tape measure protein | tail | 1 | 8413 | 13383 |
| ATI20054.1 | MF580774_p3 | head-tail joining protein | phrog_1142 | unknown function | unknown function | 1 | 2430 | 2609 |
| ATI20094.1 | MF580774_p43 | Apaf-1 related killer DARK late transcriptional regulator | phrog_36 | transcriptional regulator | transcription regulation | 1 | 34147 | 34566 |
| ATI20085.1 | MF580774_p34 | hypothetical protein | phrog_674 | unknown function | unknown function | 1 | 29056 | 30018 |
| ATI20063.1 | MF580774_p12 | tail protein | phrog_1346 | tail protein | tail | 1 | 7841 | 8194 |
| ATI20081.1 | MF580774_p30 | hypothetical protein | phrog_3159 | unknown function | unknown function | 1 | 27729 | 27926 |
| ATI20090.1 | MF580774_p39 | hypothetical protein | phrog_1489 | unknown function | unknown function | 1 | 31881 | 32051 |
| ATI20066.1 | MF580774_p15 | receptor binding protein | phrog_588 | tail fiber protein and host specificity | tail | 1 | 14945 | 18223 |
| ATI20092.1 | MF580774_p41 | DNA binding protein | phrog_1994 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 32539 | 33051 |
| ATI20071.1 | MF580774_p20 | holin | phrog_297 | holin | lysis | 1 | 21216 | 21458 |
| ATI20082.1 | MF580774_p31 | helicase | singleton | unknown function | unknown function | 1 | 28016 | 28114 |
| ATI20062.1 | MF580774_p11 | major tail protein | phrog_88 | major tail protein | tail | 1 | 7155 | 7766 |
| ATI20056.1 | MF580774_p5 | scaffolding protein | phrog_94 | head maturation protease | head and packaging | 1 | 3774 | 4442 |
| ATI20055.1 | MF580774_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2627 | 3787 |
| ATI20061.1 | MF580774_p10 | tail protein | phrog_1217 | tail protein | tail | 1 | 6763 | 7134 |
| ATI20078.1 | MF580774_p27 | cro-like repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 25478 | 25693 |
| ATI20072.1 | MF580774_p21 | lysin | phrog_998 | endolysin | lysis | 1 | 21460 | 22062 |
| ATI20053.1 | MF580774_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 540 | 2426 |
| ATI20067.1 | MF580774_p16 | accessory baseplate protein | phrog_372 | tail protein | tail | 1 | 18223 | 20271 |
| ATI20052.1 | MF580774_p1 | terminase small subunit | phrog_83 | terminase small subunit | head and packaging | 1 | 75 | 533 |
| ATI20060.1 | MF580774_p9 | head-tail joining protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 6336 | 6758 |
| ATI20093.1 | MF580774_p42 | hypothetical protein | phrog_1814 | unknown function | unknown function | 1 | 33091 | 33891 |
| ATI20068.1 | MF580774_p17 | hypothetical protein | phrog_1060 | unknown function | unknown function | 1 | 20293 | 20703 |
| ATI20076.1 | MF580774_p25 | hypothetical protein | phrog_1733 | unknown function | unknown function | 1 | 23876 | 24820 |
| ATI20080.1 | MF580774_p29 | DNA helicase loader | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 26950 | 27732 |
| ATI20057.1 | MF580774_p6 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 4457 | 5650 |
| ATI20088.1 | MF580774_p37 | resolvase | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 31145 | 31606 |
| ATI20084.1 | MF580774_p33 | ssDNA-binding protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 28421 | 29053 |
| ATI20077.1 | MF580774_p26 | hypothetical protein | phrog_2902 | anti-repressor | transcription regulation | 1 | 24813 | 25355 |
| ATI20058.1 | MF580774_p7 | DNA packaging protein | phrog_40 | head-tail adaptor Ad1 | connector | 1 | 5665 | 5979 |
| ATI20074.1 | MF580774_p23 | lysin | phrog_4238 | endolysin | lysis | 1 | 22522 | 22749 |
| ATI20083.1 | MF580774_p32 | hypothetical protein | phrog_3159 | unknown function | unknown function | 1 | 28111 | 28293 |
| ATI20070.1 | MF580774_p19 | hypothetical protein | phrog_1296 | holin | lysis | 1 | 20912 | 21208 |
| ATI20087.1 | MF580774_p36 | ssDNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 30690 | 31136 |
| ATI20089.1 | MF580774_p38 | hypothetical protein | phrog_1982 | unknown function | unknown function | 1 | 31603 | 31839 |
| ATI20069.1 | MF580774_p18 | hypothetical protein | phrog_1567 | unknown function | unknown function | 1 | 20723 | 20869 |
| ATI20059.1 | MF580774_p8 | head-tail joining protein | phrog_25 | head closure Hc1 | connector | 1 | 5979 | 6329 |
| ATI20073.1 | MF580774_p22 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22286 | 22435 |