Genomic map of Caldibacillus phage CBP1 (MF595878)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF595878
Definition
Caldibacillus phage CBP1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
37316
Host Name
Caldibacillus debilis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
66
%GC
41.86
Number of singletons
25
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATB52698.1 MF595878_p11 roantirepressor phrog_130 anti-repressor Ant transcription regulation 1 3169 3951
ATB52751.1 MF595878_p64 nucleotidyltransferase singleton unknown function unknown function -1 35167 35481
ATB52710.1 MF595878_p23 single-strand binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 9239 9673
ATB52695.1 MF595878_p8 hypothetical protein singleton unknown function unknown function 1 2280 2411
ATB52728.1 MF595878_p41 Clp protease phrog_94 head maturation protease head and packaging 1 18736 19497
ATB52750.1 MF595878_p63 nucleotidyltransferase phrog_1268 DNA polymerase DNA, RNA and nucleotide metabolism -1 34272 35180
ATB52700.1 MF595878_p13 hypothetical protein singleton unknown function unknown function 1 4101 4265
ATB52727.1 MF595878_p40 portal protein phrog_12 portal protein head and packaging 1 17580 18755
ATB52688.1 MF595878_p1 helix turn helix domain protein phrog_4691 excisionase integration and excision 1 1 249
ATB52714.1 MF595878_p27 hypothetical protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 11069 11392
ATB52696.1 MF595878_p9 transcriptional regulator phrog_8 transcriptional regulator transcription regulation -1 2371 2751
ATB52740.1 MF595878_p53 TMP repeat containing protein singleton unknown function unknown function 1 25523 26119
ATB52693.1 MF595878_p6 hypothetical protein singleton unknown function unknown function -1 1245 1418
ATB52744.1 MF595878_p57 hypothetical protein phrog_2429 involved in bacteriocin production or immunity moron, auxiliary metabolic gene and host takeover 1 31353 31571
ATB52733.1 MF595878_p46 tail-component phrog_5 tail completion or Neck1 protein connector 1 21619 21969
ATB52706.1 MF595878_p19 hypothetical protein phrog_1227 exonuclease DNA, RNA and nucleotide metabolism 1 6971 7792
ATB52742.1 MF595878_p55 hypothetical protein phrog_12586 unknown function unknown function 1 30710 30886
ATB52735.1 MF595878_p48 major tail protein phrog_88 major tail protein tail 1 22277 22849
ATB52725.1 MF595878_p38 hypothetical protein phrog_1066 unknown function unknown function 1 15531 15890
ATB52753.1 MF595878_p66 site-specific recombinase phrog_95 integrase integration and excision 1 35787 37316
ATB52737.1 MF595878_p50 hypothetical protein phrog_3033 unknown function unknown function 1 23291 23413
ATB52705.1 MF595878_p18 hypothetical protein phrog_3657 unknown function unknown function 1 6100 7032
ATB52689.1 MF595878_p2 hypothetical protein singleton unknown function unknown function -1 333 596
ATB52691.1 MF595878_p4 hypothetical protein singleton unknown function unknown function -1 873 992
ATB52752.1 MF595878_p65 hypothetical protein singleton unknown function unknown function 1 35467 35664
ATB52707.1 MF595878_p20 hypothetical protein phrog_3674 unknown function unknown function 1 7785 7949
ATB52721.1 MF595878_p34 hypothetical protein singleton unknown function unknown function 1 14416 14742
ATB52739.1 MF595878_p52 TMP repeat containing protein singleton unknown function unknown function 1 24837 25403
ATB52745.1 MF595878_p58 holin phrog_1299 holin lysis 1 31613 31855
ATB52690.1 MF595878_p3 hypothetical protein singleton unknown function unknown function -1 653 871
ATB52699.1 MF595878_p12 hypothetical protein singleton unknown function unknown function 1 3952 4080
ATB52729.1 MF595878_p42 major capsid protein phrog_10 major head protein head and packaging 1 19490 20722
ATB52711.1 MF595878_p24 hypothetical protein singleton unknown function unknown function 1 9699 9878
ATB52719.1 MF595878_p32 hypothetical protein phrog_1058 unknown function unknown function 1 12703 13182
ATB52741.1 MF595878_p54 minor structural protein phrog_33 distal tail protein Dit tail 1 26116 26925
ATB52692.1 MF595878_p5 transcriptional regulator singleton unknown function unknown function 1 1041 1280
ATB52749.1 MF595878_p62 hypothetical protein singleton unknown function unknown function -1 33488 34078
ATB52703.1 MF595878_p16 hypothetical protein singleton unknown function unknown function 1 5173 5487
ATB52702.1 MF595878_p15 hypothetical protein phrog_6048 unknown function unknown function 1 4901 5176
ATB52748.1 MF595878_p61 hypothetical protein singleton unknown function unknown function -1 33316 33471
ATB52726.1 MF595878_p39 terminase large subunit phrog_9 terminase large subunit head and packaging 1 15883 17565
ATB52732.1 MF595878_p45 hypothetical protein phrog_1951 head-tail adaptor connector 1 21324 21626
ATB52723.1 MF595878_p36 hypothetical protein phrog_16443 unknown function unknown function 1 14810 15073
ATB52738.1 MF595878_p51 hypothetical protein phrog_5755 tail length tape measure protein tail 1 23427 24722
ATB52709.1 MF595878_p22 hypothetical protein phrog_9455 unknown function unknown function 1 8975 9166
ATB52730.1 MF595878_p43 hypothetical protein phrog_390 Arc-like repressor transcription regulation 1 20728 21021
ATB52708.1 MF595878_p21 replication protein O phrog_16826 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 7956 8960
ATB52712.1 MF595878_p25 dUTPase phrog_173 nucleoside triphosphate pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 9856 10461
ATB52722.1 MF595878_p35 hypothetical protein singleton unknown function unknown function 1 14745 14861
ATB52715.1 MF595878_p28 hypothetical protein singleton unknown function unknown function 1 11365 11655
ATB52734.1 MF595878_p47 aminopeptidase phrog_78 tail terminator connector 1 21959 22276
ATB52697.1 MF595878_p10 transcriptional regulator phrog_3 transcriptional repressor transcription regulation 1 2945 3169
ATB52724.1 MF595878_p37 hypothetical protein singleton unknown function unknown function 1 15106 15249
ATB52747.1 MF595878_p60 PIN domain protein singleton unknown function unknown function -1 32600 33319
ATB52716.1 MF595878_p29 hypothetical protein singleton unknown function unknown function 1 12058 12213
ATB52720.1 MF595878_p33 hypothetical protein phrog_7339 DNA repair exonuclease DNA, RNA and nucleotide metabolism 1 13385 14428
ATB52704.1 MF595878_p17 hypothetical protein phrog_17207 unknown function unknown function 1 5788 6009
ATB52694.1 MF595878_p7 hypothetical protein phrog_3727 unknown function unknown function -1 1501 2130
ATB52731.1 MF595878_p44 DNA packaging protein phrog_5223 neck protein connector 1 21023 21337
ATB52713.1 MF595878_p26 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 10470 11069
ATB52718.1 MF595878_p31 hypothetical protein singleton unknown function unknown function 1 12425 12703
ATB52743.1 MF595878_p56 hypothetical protein singleton unknown function unknown function 1 30946 31302
ATB52746.1 MF595878_p59 N-acetylmuramoyl-L-alanine amidase phrog_435 endolysin lysis 1 31939 32565
ATB52736.1 MF595878_p49 hypothetical protein phrog_709 unknown function unknown function 1 22869 23210
ATB52717.1 MF595878_p30 hypothetical protein singleton unknown function unknown function 1 12261 12425
ATB52701.1 MF595878_p14 hypothetical protein phrog_1124 transcriptional regulator transcription regulation 1 4376 4900