Genomic map of Sinorhizobium phage phi2LM21 (MF614627)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF614627
Definition
Sinorhizobium phage phi2LM21, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
46600
Host Name
Sinorhizobium sp.
Host domain
Bacteria
Is prophage?
undef
Number of proteins
69
%GC
60.64
Number of singletons
15
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATE84661.1 MF614627_p44 tail tape measure protein phrog_10574 tail length tape measure protein tail 1 25645 27534
ATE84659.1 MF614627_p42 hypothetical protein phrog_13724 unknown function unknown function 1 24989 25390
ATE84655.1 MF614627_p38 hypothetical protein phrog_12140 head closure Hc1 connector 1 23439 23765
ATE84665.1 MF614627_p48 tail fiber protein J phrog_5616 tail fiber protein tail 1 29191 31821
ATE84682.1 MF614627_p65 ATP-dependent DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 41756 42688
ATE84623.1 MF614627_p6 hypothetical protein phrog_2730 unknown function unknown function -1 2752 2961
ATE84675.1 MF614627_p58 SOS response-associated peptidase phrog_1599 unknown function unknown function -1 39134 39799
ATE84652.1 MF614627_p35 head decoration protein phrog_49 head decoration head and packaging 1 21520 21876
ATE84669.1 MF614627_p52 hypothetical protein singleton unknown function unknown function 1 34742 35347
ATE84676.1 MF614627_p59 hypothetical protein singleton unknown function unknown function -1 39808 40065
ATE84662.1 MF614627_p45 hypothetical protein phrog_1302 distal tail protein tail 1 27534 28184
ATE84624.1 MF614627_p7 hypothetical protein singleton unknown function unknown function -1 2958 3068
ATE84656.1 MF614627_p39 hypothetical protein phrog_14028 unknown function unknown function 1 23767 24063
ATE84686.1 MF614627_p69 hypothetical protein phrog_2315 unknown function unknown function 1 46128 46466
ATE84633.1 MF614627_p16 repressor protein CI phrog_4 transcriptional repressor transcription regulation -1 6033 6830
ATE84674.1 MF614627_p57 ATP-dependent DNA ligase singleton unknown function unknown function 1 37747 39126
ATE84658.1 MF614627_p41 major tail protein phrog_1407 major tail protein tail 1 24568 24978
ATE84670.1 MF614627_p53 hypothetical protein phrog_17682 unknown function unknown function -1 35563 35889
ATE84618.1 MF614627_p1 tyrosine integrase phrog_1 integrase integration and excision -1 123 1205
ATE84622.1 MF614627_p5 hypothetical protein phrog_464 unknown function unknown function -1 2363 2755
ATE84645.1 MF614627_p28 hypothetical protein phrog_1924 minor tail protein tail 1 14476 15222
ATE84684.1 MF614627_p67 hypothetical protein phrog_5023 unknown function unknown function -1 43795 44979
ATE84625.1 MF614627_p8 hypothetical protein singleton unknown function unknown function -1 3068 3583
ATE84681.1 MF614627_p64 hypothetical protein phrog_37486 unknown function unknown function -1 41382 41645
ATE84671.1 MF614627_p54 chitinase phrog_181 endolysin lysis 1 35991 36908
ATE84632.1 MF614627_p15 hypothetical protein singleton unknown function unknown function 1 5853 6032
ATE84678.1 MF614627_p61 hypothetical protein phrog_29777 unknown function unknown function -1 40573 40749
ATE84644.1 MF614627_p27 transcription antitermination protein phrog_6386 transcription antiterminator transcription regulation 1 13607 14239
ATE84668.1 MF614627_p51 tail fiber protein phrog_6162 tail fiber protein tail 1 33649 34737
ATE84621.1 MF614627_p4 hypothetical protein phrog_10379 unknown function unknown function -1 1839 2366
ATE84641.1 MF614627_p24 hypothetical protein phrog_27894 unknown function unknown function 1 12009 12248
ATE84639.1 MF614627_p22 hypothetical protein phrog_16358 unknown function unknown function 1 9834 10148
ATE84626.1 MF614627_p9 5'-deoxynucleotidase phrog_318 deoxyribonucleoside 5' monophosphate phosphatase other -1 3576 4184
ATE84648.1 MF614627_p31 head-to-tail joining protein phrog_75 head-tail adaptor Ad1 connector 1 18077 18313
ATE84679.1 MF614627_p62 hypothetical protein singleton unknown function unknown function -1 40746 41018
ATE84664.1 MF614627_p47 hypothetical protein phrog_2134 unknown function unknown function 1 28778 29182
ATE84631.1 MF614627_p14 hypothetical protein phrog_22869 unknown function unknown function -1 5449 5664
ATE84647.1 MF614627_p30 terminase large subunit phrog_15 terminase large subunit head and packaging 1 16026 18068
ATE84634.1 MF614627_p17 Cro-like protein phrog_35 transcriptional repressor transcription regulation 1 6926 7162
ATE84635.1 MF614627_p18 hypothetical protein singleton unknown function unknown function 1 7162 7299
ATE84680.1 MF614627_p63 hypothetical protein singleton unknown function unknown function -1 41015 41245
ATE84672.1 MF614627_p55 hypothetical protein phrog_23603 unknown function unknown function 1 36911 37129
ATE84643.1 MF614627_p26 helix-turn-helix domain-containing protein phrog_270 replication initiation protein DNA, RNA and nucleotide metabolism 1 12355 13620
ATE84677.1 MF614627_p60 hypothetical protein singleton unknown function unknown function -1 40132 40545
ATE84646.1 MF614627_p29 hypothetical protein phrog_57 terminase small subunit head and packaging 1 15367 16029
ATE84650.1 MF614627_p33 head maturation protease C phrog_53 head maturation protease head and packaging 1 20028 20936
ATE84657.1 MF614627_p40 hypothetical protein phrog_4204 tail terminator connector 1 24065 24529
ATE84629.1 MF614627_p12 hypothetical protein singleton unknown function unknown function -1 4870 5196
ATE84660.1 MF614627_p43 tail assembly chaperone singleton unknown function unknown function 1 25387 25638
ATE84663.1 MF614627_p46 hypothetical protein phrog_11779 unknown function unknown function 1 28181 28774
ATE84683.1 MF614627_p66 adenine specific DNA methyltransferase phrog_56 DNA methyltransferase other 1 42883 43719
ATE84627.1 MF614627_p10 hypothetical protein phrog_33097 unknown function unknown function -1 4177 4347
ATE84654.1 MF614627_p37 hypothetical protein phrog_13113 unknown function unknown function 1 23014 23439
ATE84673.1 MF614627_p56 holin phrog_126 holin/anti-holin lysis 1 37273 37602
ATE84637.1 MF614627_p20 hypothetical protein singleton unknown function unknown function 1 7889 8041
ATE84666.1 MF614627_p49 hypothetical protein singleton unknown function unknown function 1 31838 32059
ATE84642.1 MF614627_p25 hypothetical protein singleton unknown function unknown function 1 12245 12358
ATE84620.1 MF614627_p3 HNH endonuclease phrog_1872 endonuclease DNA, RNA and nucleotide metabolism -1 1465 1842
ATE84685.1 MF614627_p68 nucleoid-associated protein phrog_3767 nucleoid associated protein DNA, RNA and nucleotide metabolism -1 44972 45973
ATE84651.1 MF614627_p34 hypothetical protein phrog_6382 unknown function unknown function 1 20961 21515
ATE84628.1 MF614627_p11 hypothetical protein phrog_6628 unknown function unknown function -1 4340 4873
ATE84653.1 MF614627_p36 major capsid protein E phrog_29 major head protein head and packaging 1 21905 22933
ATE84619.1 MF614627_p2 transcriptional regulator phrog_25900 transcriptional regulator transcription regulation -1 1205 1465
ATE84667.1 MF614627_p50 hypothetical protein phrog_21060 unknown function unknown function 1 32073 33635
ATE84649.1 MF614627_p32 portal protein phrog_21 portal protein head and packaging 1 18310 20031
ATE84630.1 MF614627_p13 hypothetical protein phrog_22894 unknown function unknown function -1 5196 5369
ATE84636.1 MF614627_p19 hypothetical protein phrog_101 CII-like transcriptional activator transcription regulation 1 7401 7889
ATE84638.1 MF614627_p21 CcrM-like DNA methyltransferase phrog_799 DNA methyltransferase other 1 8038 9837
ATE84640.1 MF614627_p23 C-5 cytosine-specific DNA methylase phrog_116 DNA methyltransferase other 1 10168 12012