Genomic map of Sinorhizobium phage phi3LM21 (MF614628)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF614628
Definition
Sinorhizobium phage phi3LM21, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae.
DB of origin
NUCCORE
Length
41448
Host Name
Sinorhizobium sp.
Host domain
Bacteria
Is prophage?
undef
Number of proteins
59
%GC
61.23
Number of singletons
21
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATE84709.1 MF614628_p23 DNA polymerase A domain-containing protein phrog_21667 unknown function unknown function 1 11384 12058
ATE84722.1 MF614628_p36 hypothetical protein singleton unknown function unknown function 1 23686 24168
ATE84741.1 MF614628_p55 hypothetical protein singleton unknown function unknown function -1 37860 38159
ATE84740.1 MF614628_p54 hypothetical protein phrog_5211 unknown function unknown function 1 37508 37843
ATE84711.1 MF614628_p25 hypothetical protein phrog_757 DNA methyltransferase other 1 12345 12992
ATE84707.1 MF614628_p21 CcrM-like DNA methyltransferase phrog_799 DNA methyltransferase other 1 9490 10848
ATE84730.1 MF614628_p44 hypothetical protein singleton unknown function unknown function 1 28395 28574
ATE84690.1 MF614628_p4 hypothetical protein singleton unknown function unknown function -1 2051 2227
ATE84701.1 MF614628_p15 hypothetical protein singleton unknown function unknown function 1 6963 7196
ATE84696.1 MF614628_p10 HTH-domain containing protein singleton unknown function unknown function -1 4674 5012
ATE84721.1 MF614628_p35 major capsid protein phrog_371 major head protein head and packaging 1 22682 23614
ATE84706.1 MF614628_p20 hypothetical protein singleton unknown function unknown function 1 9260 9490
ATE84716.1 MF614628_p30 terminase large subunit phrog_15 terminase large subunit head and packaging 1 16702 18822
ATE84702.1 MF614628_p16 hypothetical protein singleton unknown function unknown function 1 7189 7491
ATE84714.1 MF614628_p28 hypothetical protein phrog_1924 minor tail protein tail 1 15112 15888
ATE84742.1 MF614628_p56 hypothetical protein phrog_12188 unknown function unknown function 1 38275 38568
ATE84717.1 MF614628_p31 hypothetical protein phrog_118 head-tail adaptor connector 1 18822 19046
ATE84738.1 MF614628_p52 ammonia monooxygenase phrog_3362 unknown function unknown function 1 36780 37148
ATE84700.1 MF614628_p14 hypothetical protein singleton unknown function unknown function -1 6590 6874
ATE84744.1 MF614628_p58 hypothetical protein singleton unknown function unknown function -1 39598 40287
ATE84687.1 MF614628_p1 integrase phrog_1 integrase integration and excision -1 134 1249
ATE84693.1 MF614628_p7 hypothetical protein singleton unknown function unknown function -1 2984 3151
ATE84735.1 MF614628_p49 methyltransferase singleton unknown function unknown function 1 34491 35465
ATE84704.1 MF614628_p18 Cro-like protein singleton unknown function unknown function 1 8284 8541
ATE84703.1 MF614628_p17 CI repressor phrog_4 transcriptional repressor transcription regulation -1 7488 8294
ATE84691.1 MF614628_p5 ACSH domain containing protein phrog_3193 unknown function unknown function -1 2224 2649
ATE84745.1 MF614628_p59 hypothetical protein singleton unknown function unknown function -1 40406 41197
ATE84727.1 MF614628_p41 hypothetical protein singleton unknown function unknown function 1 25743 25853
ATE84732.1 MF614628_p46 hypothetical protein phrog_2134 unknown function unknown function 1 29155 29577
ATE84728.1 MF614628_p42 tail tape measure protein phrog_8892 tail length tape measure protein tail 1 25860 27641
ATE84708.1 MF614628_p22 hypothetical protein phrog_10379 unknown function unknown function 1 10848 11387
ATE84713.1 MF614628_p27 transcription antitermination protein phrog_6386 transcription antiterminator transcription regulation 1 14220 14888
ATE84719.1 MF614628_p33 head maturation protease phrog_53 head maturation protease head and packaging 1 20641 22002
ATE84724.1 MF614628_p38 minor tail protein U singleton unknown function unknown function 1 24506 24946
ATE84699.1 MF614628_p13 hypothetical protein singleton unknown function unknown function -1 6403 6585
ATE84723.1 MF614628_p37 head-to-tail joining protein phrog_82 head closure Hc1 connector 1 24171 24503
ATE84698.1 MF614628_p12 hypothetical protein phrog_204 unknown function unknown function -1 6034 6384
ATE84710.1 MF614628_p24 hypothetical protein phrog_16358 unknown function unknown function 1 12055 12348
ATE84705.1 MF614628_p19 hypothetical protein phrog_101 CII-like transcriptional activator transcription regulation 1 8775 9257
ATE84715.1 MF614628_p29 terminase small subunit phrog_141 terminase small subunit head and packaging 1 16053 16709
ATE84688.1 MF614628_p2 hypothetical protein singleton unknown function unknown function -1 1054 1455
ATE84731.1 MF614628_p45 hypothetical protein phrog_2048 tail protein tail 1 28581 29165
ATE84718.1 MF614628_p32 portal protein phrog_21 portal protein head and packaging 1 19043 20644
ATE84733.1 MF614628_p47 tail fiber protein phrog_5616 tail fiber protein tail 1 29574 31766
ATE84697.1 MF614628_p11 hypothetical protein phrog_210 unknown function unknown function -1 5086 5997
ATE84694.1 MF614628_p8 hypothetical protein phrog_2045 unknown function unknown function -1 3144 4340
ATE84725.1 MF614628_p39 major tail protein phrog_1407 major tail protein tail 1 24956 25351
ATE84737.1 MF614628_p51 chitinase phrog_14712 chitinase moron, auxiliary metabolic gene and host takeover 1 35818 36780
ATE84692.1 MF614628_p6 hypothetical protein phrog_37182 unknown function unknown function -1 2649 2987
ATE84712.1 MF614628_p26 helix-turn-helix domain-containing protein phrog_270 replication initiation protein DNA, RNA and nucleotide metabolism 1 12989 14236
ATE84739.1 MF614628_p53 hypothetical protein phrog_23603 unknown function unknown function 1 37148 37384
ATE84720.1 MF614628_p34 virion structural protein phrog_1731 virion structural protein head and packaging 1 22187 22612
ATE84743.1 MF614628_p57 ATP-dependent DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 38600 39568
ATE84726.1 MF614628_p40 tail assembly chaperone singleton unknown function unknown function 1 25348 25719
ATE84695.1 MF614628_p9 nucleoside triphosphate pyrophosphohydrolase phrog_4856 nucleoside triphosphate pyrophosphohydrolase other -1 4333 4677
ATE84689.1 MF614628_p3 hypothetical protein singleton unknown function unknown function -1 1449 2051
ATE84736.1 MF614628_p50 hypothetical protein singleton unknown function unknown function 1 35554 35688
ATE84734.1 MF614628_p48 tail fiber protein phrog_38233 tail fiber protein tail 1 31805 34489
ATE84729.1 MF614628_p43 hypothetical protein phrog_1302 distal tail protein tail 1 27641 28363