| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF663786 |
Definition |
Bordetella phage vB_BbrM_PHB04, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phabquatrovirus; Bordetella virus PHB04. |
DB of origin |
NUCCORE |
Length |
94005 |
Host Name |
Bordetella bronchiseptica |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
124 |
%GC |
65.46 |
Number of singletons |
60 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATI15700.1 | MF663786_p82 | hypothetical protein | singleton | unknown function | unknown function | 1 | 65642 | 66040 |
| ATI15695.1 | MF663786_p77 | hypothetical protein | phrog_34903 | unknown function | unknown function | 1 | 64064 | 64312 |
| ATI15680.1 | MF663786_p62 | hypothetical protein | singleton | unknown function | unknown function | -1 | 56866 | 57168 |
| ATI15693.1 | MF663786_p75 | hypothetical protein | phrog_24457 | unknown function | unknown function | 1 | 63373 | 63681 |
| ATI15674.1 | MF663786_p56 | hypothetical protein | singleton | unknown function | unknown function | -1 | 54679 | 55332 |
| ATI15664.1 | MF663786_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 44711 | 45076 |
| ATI15661.1 | MF663786_p43 | hypothetical protein | phrog_8303 | unknown function | unknown function | 1 | 42656 | 42892 |
| ATI15651.1 | MF663786_p33 | hypothetical protein | singleton | unknown function | unknown function | -1 | 35741 | 35950 |
| ATI15715.1 | MF663786_p97 | hypothetical protein | singleton | unknown function | unknown function | -1 | 72552 | 72878 |
| ATI15697.1 | MF663786_p79 | hypothetical protein | singleton | unknown function | unknown function | 1 | 64757 | 64960 |
| ATI15739.1 | MF663786_p121 | tail protein | phrog_4209 | tail fiber protein | tail | -1 | 91547 | 92548 |
| ATI15707.1 | MF663786_p89 | hypothetical protein | singleton | unknown function | unknown function | 1 | 67561 | 67791 |
| ATI15650.1 | MF663786_p32 | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | phrog_990 | metal-dependent phosphohydrolase | other | -1 | 35166 | 35744 |
| ATI15719.1 | MF663786_p101 | single-stranded DNA-binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 76909 | 77373 |
| ATI15728.1 | MF663786_p110 | hypothetical protein | phrog_14517 | unknown function | unknown function | 1 | 84173 | 84928 |
| ATI15737.1 | MF663786_p119 | tail collar domain protein | phrog_523 | tail collar fiber protein | tail | -1 | 90408 | 91073 |
| ATI15701.1 | MF663786_p83 | hypothetical protein | singleton | unknown function | unknown function | 1 | 66141 | 66365 |
| ATI15645.1 | MF663786_p27 | N-6 DNA methylase | phrog_11801 | DNA methyltransferase | other | -1 | 26262 | 32555 |
| ATI15635.1 | MF663786_p17 | hypothetical protein | phrog_772 | tail fiber protein | tail | -1 | 15543 | 16652 |
| ATI15723.1 | MF663786_p105 | exonuclease VIII | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 79773 | 80783 |
| ATI15735.1 | MF663786_p117 | endolysin | phrog_669 | endolysin | lysis | -1 | 89306 | 90034 |
| ATI15730.1 | MF663786_p112 | ATP-binding protein | phrog_325 | Dda-like helicase | DNA, RNA and nucleotide metabolism | 1 | 85313 | 86410 |
| ATI15690.1 | MF663786_p72 | hypothetical protein | singleton | unknown function | unknown function | -1 | 61034 | 61555 |
| ATI15692.1 | MF663786_p74 | hypothetical protein | singleton | unknown function | unknown function | 1 | 62972 | 63376 |
| ATI15642.1 | MF663786_p24 | hypothetical protein | singleton | unknown function | unknown function | -1 | 20872 | 21084 |
| ATI15714.1 | MF663786_p96 | hypothetical protein | phrog_20266 | metallo-phosphoesterase | other | 1 | 71272 | 72555 |
| ATI15630.1 | MF663786_p12 | major tail sheath | phrog_279 | tail sheath | tail | -1 | 11200 | 12918 |
| ATI15671.1 | MF663786_p53 | hypothetical protein | phrog_14307 | unknown function | unknown function | 1 | 51644 | 52090 |
| ATI15626.1 | MF663786_p8 | hypothetical protein | phrog_669 | endolysin | lysis | -1 | 7113 | 10037 |
| ATI15673.1 | MF663786_p55 | terminase large subunit | phrog_675 | terminase large subunit | head and packaging | -1 | 52583 | 54679 |
| ATI15727.1 | MF663786_p109 | hypothetical protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 83921 | 84124 |
| ATI15644.1 | MF663786_p26 | hypothetical protein | phrog_1629 | Ulx-like anti-restriction | moron, auxiliary metabolic gene and host takeover | -1 | 25939 | 26265 |
| ATI15659.1 | MF663786_p41 | RNA-splicing ligase | phrog_1075 | tRNA splicing ligase | DNA, RNA and nucleotide metabolism | 1 | 41000 | 42193 |
| ATI15627.1 | MF663786_p9 | hypothetical protein | singleton | unknown function | unknown function | -1 | 10038 | 10208 |
| ATI15666.1 | MF663786_p48 | AraC family transcriptional regulator | phrog_7620 | transcriptional regulator | transcription regulation | 1 | 47783 | 48382 |
| ATI15623.1 | MF663786_p5 | hypothetical protein | phrog_1011 | virion structural protein | head and packaging | -1 | 3561 | 4718 |
| ATI15716.1 | MF663786_p98 | DNA primase/helicase | phrog_35358 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 72878 | 75721 |
| ATI15731.1 | MF663786_p113 | integrase family protein | phrog_1 | integrase | integration and excision | 1 | 86771 | 88084 |
| ATI15629.1 | MF663786_p11 | hypothetical protein | phrog_985 | virion structural protein | head and packaging | -1 | 10761 | 11183 |
| ATI15678.1 | MF663786_p60 | hypothetical protein | singleton | unknown function | unknown function | -1 | 56361 | 56645 |
| ATI15742.1 | MF663786_p124 | tail protein | singleton | unknown function | unknown function | -1 | 93494 | 93928 |
| ATI15712.1 | MF663786_p94 | hypothetical protein | phrog_7674 | unknown function | unknown function | 1 | 69930 | 71003 |
| ATI15625.1 | MF663786_p7 | hypothetical protein | singleton | unknown function | unknown function | -1 | 5608 | 7113 |
| ATI15708.1 | MF663786_p90 | hypothetical protein | singleton | unknown function | unknown function | 1 | 67869 | 68021 |
| ATI15734.1 | MF663786_p116 | hypothetical protein | phrog_462 | lipoprotein | other | -1 | 89037 | 89309 |
| ATI15732.1 | MF663786_p114 | hypothetical protein | phrog_54 | DksA-like zinc-finger protein | other | 1 | 88184 | 88411 |
| ATI15699.1 | MF663786_p81 | hypothetical protein | phrog_5443 | unknown function | unknown function | 1 | 65259 | 65630 |
| ATI15638.1 | MF663786_p20 | major capsid protein | phrog_752 | major head protein | head and packaging | -1 | 17423 | 18925 |
| ATI15657.1 | MF663786_p39 | hypothetical protein | phrog_4389 | unknown function | unknown function | 1 | 40041 | 40463 |
| ATI15710.1 | MF663786_p92 | hypothetical protein | singleton | unknown function | unknown function | 1 | 68493 | 69281 |
| ATI15669.1 | MF663786_p51 | hypothetical protein | singleton | unknown function | unknown function | 1 | 50482 | 50721 |
| ATI15722.1 | MF663786_p104 | hypothetical protein | singleton | unknown function | unknown function | -1 | 79335 | 79628 |
| ATI15624.1 | MF663786_p6 | hypothetical protein | singleton | unknown function | unknown function | -1 | 4761 | 5606 |
| ATI15649.1 | MF663786_p31 | serine/threonine protein phosphatase | phrog_246 | NinI-like serine-threonine phosphatase | other | -1 | 34471 | 35163 |
| ATI15675.1 | MF663786_p57 | hypothetical protein | singleton | unknown function | unknown function | -1 | 55431 | 55781 |
| ATI15653.1 | MF663786_p35 | portal protein | phrog_12 | portal protein | head and packaging | -1 | 37428 | 39176 |
| ATI15679.1 | MF663786_p61 | hypothetical protein | singleton | unknown function | unknown function | -1 | 56642 | 56869 |
| ATI15703.1 | MF663786_p85 | hypothetical protein | singleton | unknown function | unknown function | 1 | 66615 | 66761 |
| ATI15704.1 | MF663786_p86 | hypothetical protein | singleton | unknown function | unknown function | 1 | 66797 | 66934 |
| ATI15740.1 | MF663786_p122 | tail-collar fiber protein | phrog_523 | tail collar fiber protein | tail | -1 | 92560 | 93165 |
| ATI15726.1 | MF663786_p108 | hypothetical protein | phrog_3657 | unknown function | unknown function | 1 | 82756 | 83877 |
| ATI15717.1 | MF663786_p99 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 75949 | 76407 |
| ATI15648.1 | MF663786_p30 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33289 | 34449 |
| ATI15670.1 | MF663786_p52 | hypothetical protein | singleton | unknown function | unknown function | 1 | 50718 | 51647 |
| ATI15736.1 | MF663786_p118 | holin | phrog_8226 | holin | lysis | -1 | 90034 | 90336 |
| ATI15724.1 | MF663786_p106 | hypothetical protein | phrog_1499 | unknown function | unknown function | 1 | 80789 | 82111 |
| ATI15694.1 | MF663786_p76 | hypothetical protein | phrog_28174 | unknown function | unknown function | 1 | 63777 | 64022 |
| ATI15640.1 | MF663786_p22 | hypothetical protein | phrog_1028 | head maturation protease | head and packaging | -1 | 19624 | 20517 |
| ATI15636.1 | MF663786_p18 | hypothetical protein | singleton | unknown function | unknown function | -1 | 16717 | 16914 |
| ATI15713.1 | MF663786_p95 | hypothetical protein | singleton | unknown function | unknown function | 1 | 71000 | 71221 |
| ATI15655.1 | MF663786_p37 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39536 | 39757 |
| ATI15621.1 | MF663786_p3 | baseplate J-like protein | phrog_6 | baseplate wedge subunit | tail | -1 | 1819 | 2937 |
| ATI15632.1 | MF663786_p14 | hypothetical protein | singleton | unknown function | unknown function | -1 | 13152 | 13967 |
| ATI15631.1 | MF663786_p13 | hypothetical protein | singleton | unknown function | unknown function | -1 | 12930 | 13142 |
| ATI15733.1 | MF663786_p115 | DNA-packaging protein | phrog_1403 | Rz-like spanin | lysis | -1 | 88450 | 89040 |
| ATI15658.1 | MF663786_p40 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40460 | 40873 |
| ATI15643.1 | MF663786_p25 | surperfamily II DNA or RNA helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 21098 | 25654 |
| ATI15741.1 | MF663786_p123 | hypothetical protein | phrog_1276 | unknown function | unknown function | -1 | 93167 | 93487 |
| ATI15689.1 | MF663786_p71 | hypothetical protein | singleton | unknown function | unknown function | -1 | 60747 | 61034 |
| ATI15729.1 | MF663786_p111 | hypothetical protein | phrog_4887 | unknown function | unknown function | 1 | 84925 | 85254 |
| ATI15628.1 | MF663786_p10 | hypothetical protein | singleton | unknown function | unknown function | -1 | 10306 | 10674 |
| ATI15706.1 | MF663786_p88 | hypothetical protein | singleton | unknown function | unknown function | 1 | 67295 | 67558 |
| ATI15705.1 | MF663786_p87 | hypothetical protein | singleton | unknown function | unknown function | 1 | 67011 | 67247 |
| ATI15660.1 | MF663786_p42 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42202 | 42654 |
| ATI15637.1 | MF663786_p19 | hypothetical protein | singleton | unknown function | unknown function | -1 | 16926 | 17357 |
| ATI15721.1 | MF663786_p103 | hypothetical protein | phrog_4276 | unknown function | unknown function | -1 | 79102 | 79335 |
| ATI15654.1 | MF663786_p36 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39278 | 39454 |
| ATI15718.1 | MF663786_p100 | hypothetical protein | phrog_2252 | endolysin; inhibits RNA polymerase | lysis | -1 | 76400 | 76900 |
| ATI15688.1 | MF663786_p70 | hypothetical protein | phrog_26541 | unknown function | unknown function | -1 | 60380 | 60634 |
| ATI15663.1 | MF663786_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 44452 | 44646 |
| ATI15633.1 | MF663786_p15 | hypothetical protein | phrog_16819 | unknown function | unknown function | 1 | 14037 | 14897 |
| ATI15647.1 | MF663786_p29 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33113 | 33292 |
| ATI15709.1 | MF663786_p91 | hypothetical protein | singleton | unknown function | unknown function | 1 | 68112 | 68426 |
| ATI15668.1 | MF663786_p50 | site-specific DNA-methytransferase | phrog_67 | DNA methyltransferase | other | 1 | 49469 | 50485 |
| ATI15686.1 | MF663786_p68 | hypothetical protein | phrog_11642 | unknown function | unknown function | -1 | 59883 | 60131 |
| ATI15682.1 | MF663786_p64 | hypothetical protein | phrog_513 | transposase | integration and excision | -1 | 57478 | 57999 |
| ATI15672.1 | MF663786_p54 | hypothetical protein | phrog_289 | GTP-binding domain | other | -1 | 52242 | 52586 |
| ATI15619.1 | MF663786_p1 | hypothetical protein | phrog_5417 | unknown function | unknown function | -1 | 210 | 662 |
| ATI15711.1 | MF663786_p93 | hypothetical protein | phrog_8313 | unknown function | unknown function | 1 | 69340 | 69933 |
| ATI15634.1 | MF663786_p16 | hypothetical protein | phrog_1004 | virion structural protein | head and packaging | -1 | 14894 | 15541 |
| ATI15641.1 | MF663786_p23 | hypothetical protein | singleton | unknown function | unknown function | -1 | 20612 | 20872 |
| ATI15683.1 | MF663786_p65 | hypothetical protein | singleton | unknown function | unknown function | -1 | 58044 | 59258 |
| ATI15676.1 | MF663786_p58 | hypothetical protein | singleton | unknown function | unknown function | -1 | 55882 | 56061 |
| ATI15691.1 | MF663786_p73 | hypothetical protein | phrog_3628 | unknown function | unknown function | 1 | 62145 | 62930 |
| ATI15725.1 | MF663786_p107 | hypothetical protein | phrog_17928 | unknown function | unknown function | 1 | 82181 | 82744 |
| ATI15681.1 | MF663786_p63 | hypothetical protein | phrog_26541 | unknown function | unknown function | -1 | 57221 | 57481 |
| ATI15665.1 | MF663786_p47 | hypothetical protein | singleton | unknown function | unknown function | 1 | 46581 | 46694 |
| ATI15646.1 | MF663786_p28 | hypothetical protein | singleton | unknown function | unknown function | -1 | 32601 | 33110 |
| ATI15720.1 | MF663786_p102 | helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 77385 | 79046 |
| ATI15662.1 | MF663786_p44 | transcriptional regulator | singleton | unknown function | unknown function | 1 | 42889 | 44367 |
| ATI15696.1 | MF663786_p78 | hypothetical protein | singleton | unknown function | unknown function | 1 | 64351 | 64740 |
| ATI15684.1 | MF663786_p66 | hypothetical protein | singleton | unknown function | unknown function | -1 | 59258 | 59449 |
| ATI15702.1 | MF663786_p84 | hypothetical protein | singleton | unknown function | unknown function | 1 | 66413 | 66610 |
| ATI15656.1 | MF663786_p38 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39754 | 40044 |
| ATI15738.1 | MF663786_p120 | hypothetical protein | phrog_188 | tail fiber assembly protein | tail | -1 | 91125 | 91535 |
| ATI15677.1 | MF663786_p59 | hypothetical protein | singleton | unknown function | unknown function | -1 | 56106 | 56288 |
| ATI15622.1 | MF663786_p4 | baseplate assembly protein W | phrog_975 | baseplate protein | tail | -1 | 2947 | 3564 |
| ATI15639.1 | MF663786_p21 | hypothetical protein | singleton | unknown function | unknown function | -1 | 18956 | 19627 |
| ATI15685.1 | MF663786_p67 | hypothetical protein | singleton | unknown function | unknown function | -1 | 59582 | 59881 |
| ATI15698.1 | MF663786_p80 | hypothetical protein | singleton | unknown function | unknown function | 1 | 64957 | 65262 |
| ATI15667.1 | MF663786_p49 | hypothetical protein | phrog_20105 | unknown function | unknown function | -1 | 48563 | 49318 |
| ATI15652.1 | MF663786_p34 | hypothetical protein | singleton | unknown function | unknown function | -1 | 35950 | 37431 |
| ATI15620.1 | MF663786_p2 | hypothetical protein | singleton | unknown function | unknown function | -1 | 707 | 1816 |
| ATI15687.1 | MF663786_p69 | hypothetical protein | singleton | unknown function | unknown function | -1 | 60128 | 60376 |