Genomic map of Bordetella phage vB_BbrM_PHB04 (MF663786)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF663786
Definition
Bordetella phage vB_BbrM_PHB04, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Phabquatrovirus; Bordetella virus PHB04.
DB of origin
NUCCORE
Length
94005
Host Name
Bordetella bronchiseptica
Host domain
Bacteria
Is prophage?
undef
Number of proteins
124
%GC
65.46
Number of singletons
60
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATI15700.1 MF663786_p82 hypothetical protein singleton unknown function unknown function 1 65642 66040
ATI15695.1 MF663786_p77 hypothetical protein phrog_34903 unknown function unknown function 1 64064 64312
ATI15680.1 MF663786_p62 hypothetical protein singleton unknown function unknown function -1 56866 57168
ATI15693.1 MF663786_p75 hypothetical protein phrog_24457 unknown function unknown function 1 63373 63681
ATI15674.1 MF663786_p56 hypothetical protein singleton unknown function unknown function -1 54679 55332
ATI15664.1 MF663786_p46 hypothetical protein singleton unknown function unknown function 1 44711 45076
ATI15661.1 MF663786_p43 hypothetical protein phrog_8303 unknown function unknown function 1 42656 42892
ATI15651.1 MF663786_p33 hypothetical protein singleton unknown function unknown function -1 35741 35950
ATI15715.1 MF663786_p97 hypothetical protein singleton unknown function unknown function -1 72552 72878
ATI15697.1 MF663786_p79 hypothetical protein singleton unknown function unknown function 1 64757 64960
ATI15739.1 MF663786_p121 tail protein phrog_4209 tail fiber protein tail -1 91547 92548
ATI15707.1 MF663786_p89 hypothetical protein singleton unknown function unknown function 1 67561 67791
ATI15650.1 MF663786_p32 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase phrog_990 metal-dependent phosphohydrolase other -1 35166 35744
ATI15719.1 MF663786_p101 single-stranded DNA-binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 76909 77373
ATI15728.1 MF663786_p110 hypothetical protein phrog_14517 unknown function unknown function 1 84173 84928
ATI15737.1 MF663786_p119 tail collar domain protein phrog_523 tail collar fiber protein tail -1 90408 91073
ATI15701.1 MF663786_p83 hypothetical protein singleton unknown function unknown function 1 66141 66365
ATI15645.1 MF663786_p27 N-6 DNA methylase phrog_11801 DNA methyltransferase other -1 26262 32555
ATI15635.1 MF663786_p17 hypothetical protein phrog_772 tail fiber protein tail -1 15543 16652
ATI15723.1 MF663786_p105 exonuclease VIII phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 79773 80783
ATI15735.1 MF663786_p117 endolysin phrog_669 endolysin lysis -1 89306 90034
ATI15730.1 MF663786_p112 ATP-binding protein phrog_325 Dda-like helicase DNA, RNA and nucleotide metabolism 1 85313 86410
ATI15690.1 MF663786_p72 hypothetical protein singleton unknown function unknown function -1 61034 61555
ATI15692.1 MF663786_p74 hypothetical protein singleton unknown function unknown function 1 62972 63376
ATI15642.1 MF663786_p24 hypothetical protein singleton unknown function unknown function -1 20872 21084
ATI15714.1 MF663786_p96 hypothetical protein phrog_20266 metallo-phosphoesterase other 1 71272 72555
ATI15630.1 MF663786_p12 major tail sheath phrog_279 tail sheath tail -1 11200 12918
ATI15671.1 MF663786_p53 hypothetical protein phrog_14307 unknown function unknown function 1 51644 52090
ATI15626.1 MF663786_p8 hypothetical protein phrog_669 endolysin lysis -1 7113 10037
ATI15673.1 MF663786_p55 terminase large subunit phrog_675 terminase large subunit head and packaging -1 52583 54679
ATI15727.1 MF663786_p109 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 83921 84124
ATI15644.1 MF663786_p26 hypothetical protein phrog_1629 Ulx-like anti-restriction moron, auxiliary metabolic gene and host takeover -1 25939 26265
ATI15659.1 MF663786_p41 RNA-splicing ligase phrog_1075 tRNA splicing ligase DNA, RNA and nucleotide metabolism 1 41000 42193
ATI15627.1 MF663786_p9 hypothetical protein singleton unknown function unknown function -1 10038 10208
ATI15666.1 MF663786_p48 AraC family transcriptional regulator phrog_7620 transcriptional regulator transcription regulation 1 47783 48382
ATI15623.1 MF663786_p5 hypothetical protein phrog_1011 virion structural protein head and packaging -1 3561 4718
ATI15716.1 MF663786_p98 DNA primase/helicase phrog_35358 DNA primase DNA, RNA and nucleotide metabolism -1 72878 75721
ATI15731.1 MF663786_p113 integrase family protein phrog_1 integrase integration and excision 1 86771 88084
ATI15629.1 MF663786_p11 hypothetical protein phrog_985 virion structural protein head and packaging -1 10761 11183
ATI15678.1 MF663786_p60 hypothetical protein singleton unknown function unknown function -1 56361 56645
ATI15742.1 MF663786_p124 tail protein singleton unknown function unknown function -1 93494 93928
ATI15712.1 MF663786_p94 hypothetical protein phrog_7674 unknown function unknown function 1 69930 71003
ATI15625.1 MF663786_p7 hypothetical protein singleton unknown function unknown function -1 5608 7113
ATI15708.1 MF663786_p90 hypothetical protein singleton unknown function unknown function 1 67869 68021
ATI15734.1 MF663786_p116 hypothetical protein phrog_462 lipoprotein other -1 89037 89309
ATI15732.1 MF663786_p114 hypothetical protein phrog_54 DksA-like zinc-finger protein other 1 88184 88411
ATI15699.1 MF663786_p81 hypothetical protein phrog_5443 unknown function unknown function 1 65259 65630
ATI15638.1 MF663786_p20 major capsid protein phrog_752 major head protein head and packaging -1 17423 18925
ATI15657.1 MF663786_p39 hypothetical protein phrog_4389 unknown function unknown function 1 40041 40463
ATI15710.1 MF663786_p92 hypothetical protein singleton unknown function unknown function 1 68493 69281
ATI15669.1 MF663786_p51 hypothetical protein singleton unknown function unknown function 1 50482 50721
ATI15722.1 MF663786_p104 hypothetical protein singleton unknown function unknown function -1 79335 79628
ATI15624.1 MF663786_p6 hypothetical protein singleton unknown function unknown function -1 4761 5606
ATI15649.1 MF663786_p31 serine/threonine protein phosphatase phrog_246 NinI-like serine-threonine phosphatase other -1 34471 35163
ATI15675.1 MF663786_p57 hypothetical protein singleton unknown function unknown function -1 55431 55781
ATI15653.1 MF663786_p35 portal protein phrog_12 portal protein head and packaging -1 37428 39176
ATI15679.1 MF663786_p61 hypothetical protein singleton unknown function unknown function -1 56642 56869
ATI15703.1 MF663786_p85 hypothetical protein singleton unknown function unknown function 1 66615 66761
ATI15704.1 MF663786_p86 hypothetical protein singleton unknown function unknown function 1 66797 66934
ATI15740.1 MF663786_p122 tail-collar fiber protein phrog_523 tail collar fiber protein tail -1 92560 93165
ATI15726.1 MF663786_p108 hypothetical protein phrog_3657 unknown function unknown function 1 82756 83877
ATI15717.1 MF663786_p99 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism -1 75949 76407
ATI15648.1 MF663786_p30 hypothetical protein singleton unknown function unknown function -1 33289 34449
ATI15670.1 MF663786_p52 hypothetical protein singleton unknown function unknown function 1 50718 51647
ATI15736.1 MF663786_p118 holin phrog_8226 holin lysis -1 90034 90336
ATI15724.1 MF663786_p106 hypothetical protein phrog_1499 unknown function unknown function 1 80789 82111
ATI15694.1 MF663786_p76 hypothetical protein phrog_28174 unknown function unknown function 1 63777 64022
ATI15640.1 MF663786_p22 hypothetical protein phrog_1028 head maturation protease head and packaging -1 19624 20517
ATI15636.1 MF663786_p18 hypothetical protein singleton unknown function unknown function -1 16717 16914
ATI15713.1 MF663786_p95 hypothetical protein singleton unknown function unknown function 1 71000 71221
ATI15655.1 MF663786_p37 hypothetical protein singleton unknown function unknown function 1 39536 39757
ATI15621.1 MF663786_p3 baseplate J-like protein phrog_6 baseplate wedge subunit tail -1 1819 2937
ATI15632.1 MF663786_p14 hypothetical protein singleton unknown function unknown function -1 13152 13967
ATI15631.1 MF663786_p13 hypothetical protein singleton unknown function unknown function -1 12930 13142
ATI15733.1 MF663786_p115 DNA-packaging protein phrog_1403 Rz-like spanin lysis -1 88450 89040
ATI15658.1 MF663786_p40 hypothetical protein singleton unknown function unknown function 1 40460 40873
ATI15643.1 MF663786_p25 surperfamily II DNA or RNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 21098 25654
ATI15741.1 MF663786_p123 hypothetical protein phrog_1276 unknown function unknown function -1 93167 93487
ATI15689.1 MF663786_p71 hypothetical protein singleton unknown function unknown function -1 60747 61034
ATI15729.1 MF663786_p111 hypothetical protein phrog_4887 unknown function unknown function 1 84925 85254
ATI15628.1 MF663786_p10 hypothetical protein singleton unknown function unknown function -1 10306 10674
ATI15706.1 MF663786_p88 hypothetical protein singleton unknown function unknown function 1 67295 67558
ATI15705.1 MF663786_p87 hypothetical protein singleton unknown function unknown function 1 67011 67247
ATI15660.1 MF663786_p42 hypothetical protein singleton unknown function unknown function 1 42202 42654
ATI15637.1 MF663786_p19 hypothetical protein singleton unknown function unknown function -1 16926 17357
ATI15721.1 MF663786_p103 hypothetical protein phrog_4276 unknown function unknown function -1 79102 79335
ATI15654.1 MF663786_p36 hypothetical protein singleton unknown function unknown function 1 39278 39454
ATI15718.1 MF663786_p100 hypothetical protein phrog_2252 endolysin; inhibits RNA polymerase lysis -1 76400 76900
ATI15688.1 MF663786_p70 hypothetical protein phrog_26541 unknown function unknown function -1 60380 60634
ATI15663.1 MF663786_p45 hypothetical protein singleton unknown function unknown function 1 44452 44646
ATI15633.1 MF663786_p15 hypothetical protein phrog_16819 unknown function unknown function 1 14037 14897
ATI15647.1 MF663786_p29 hypothetical protein singleton unknown function unknown function -1 33113 33292
ATI15709.1 MF663786_p91 hypothetical protein singleton unknown function unknown function 1 68112 68426
ATI15668.1 MF663786_p50 site-specific DNA-methytransferase phrog_67 DNA methyltransferase other 1 49469 50485
ATI15686.1 MF663786_p68 hypothetical protein phrog_11642 unknown function unknown function -1 59883 60131
ATI15682.1 MF663786_p64 hypothetical protein phrog_513 transposase integration and excision -1 57478 57999
ATI15672.1 MF663786_p54 hypothetical protein phrog_289 GTP-binding domain other -1 52242 52586
ATI15619.1 MF663786_p1 hypothetical protein phrog_5417 unknown function unknown function -1 210 662
ATI15711.1 MF663786_p93 hypothetical protein phrog_8313 unknown function unknown function 1 69340 69933
ATI15634.1 MF663786_p16 hypothetical protein phrog_1004 virion structural protein head and packaging -1 14894 15541
ATI15641.1 MF663786_p23 hypothetical protein singleton unknown function unknown function -1 20612 20872
ATI15683.1 MF663786_p65 hypothetical protein singleton unknown function unknown function -1 58044 59258
ATI15676.1 MF663786_p58 hypothetical protein singleton unknown function unknown function -1 55882 56061
ATI15691.1 MF663786_p73 hypothetical protein phrog_3628 unknown function unknown function 1 62145 62930
ATI15725.1 MF663786_p107 hypothetical protein phrog_17928 unknown function unknown function 1 82181 82744
ATI15681.1 MF663786_p63 hypothetical protein phrog_26541 unknown function unknown function -1 57221 57481
ATI15665.1 MF663786_p47 hypothetical protein singleton unknown function unknown function 1 46581 46694
ATI15646.1 MF663786_p28 hypothetical protein singleton unknown function unknown function -1 32601 33110
ATI15720.1 MF663786_p102 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 77385 79046
ATI15662.1 MF663786_p44 transcriptional regulator singleton unknown function unknown function 1 42889 44367
ATI15696.1 MF663786_p78 hypothetical protein singleton unknown function unknown function 1 64351 64740
ATI15684.1 MF663786_p66 hypothetical protein singleton unknown function unknown function -1 59258 59449
ATI15702.1 MF663786_p84 hypothetical protein singleton unknown function unknown function 1 66413 66610
ATI15656.1 MF663786_p38 hypothetical protein singleton unknown function unknown function 1 39754 40044
ATI15738.1 MF663786_p120 hypothetical protein phrog_188 tail fiber assembly protein tail -1 91125 91535
ATI15677.1 MF663786_p59 hypothetical protein singleton unknown function unknown function -1 56106 56288
ATI15622.1 MF663786_p4 baseplate assembly protein W phrog_975 baseplate protein tail -1 2947 3564
ATI15639.1 MF663786_p21 hypothetical protein singleton unknown function unknown function -1 18956 19627
ATI15685.1 MF663786_p67 hypothetical protein singleton unknown function unknown function -1 59582 59881
ATI15698.1 MF663786_p80 hypothetical protein singleton unknown function unknown function 1 64957 65262
ATI15667.1 MF663786_p49 hypothetical protein phrog_20105 unknown function unknown function -1 48563 49318
ATI15652.1 MF663786_p34 hypothetical protein singleton unknown function unknown function -1 35950 37431
ATI15620.1 MF663786_p2 hypothetical protein singleton unknown function unknown function -1 707 1816
ATI15687.1 MF663786_p69 hypothetical protein singleton unknown function unknown function -1 60128 60376