Genomic map of Mycobacterium phage Apocalypse (MF668267)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF668267
Definition
Mycobacterium phage Apocalypse, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Timquatrovirus; unclassified Timquatrovirus.
DB of origin
NUCCORE
Length
59947
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
98
%GC
66.37
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASZ72694.1 MF668267_p67 hypothetical protein phrog_1911 unknown function unknown function 1 43810 44319
ASZ72716.1 MF668267_p90 hypothetical protein phrog_3665 unknown function unknown function 1 56863 57024
ASZ72703.1 MF668267_p77 hypothetical protein phrog_1338 unknown function unknown function 1 50800 51072
ASZ72649.1 MF668267_p20 tape measure protein phrog_971 endolysin lysis 1 12053 15886
ASZ72702.1 MF668267_p76 hypothetical protein phrog_4269 unknown function unknown function 1 50570 50803
ASZ72659.1 MF668267_p30 lysin B phrog_102 endolysin lysis 1 26431 27303
ASZ72663.1 MF668267_p34 exonuclease phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 28330 29538
ASZ72661.1 MF668267_p32 hypothetical protein phrog_3413 unknown function unknown function 1 27751 28095
ASZ72634.1 MF668267_p5 hypothetical protein phrog_2622 unknown function unknown function 1 1164 1367
ASZ72678.1 MF668267_p50 hypothetical protein phrog_3903 unknown function unknown function 1 37365 37577
ASZ72726.1 MF668267_p91 hypothetical protein phrog_33361 unknown function unknown function 1 57070 57195
ASZ72671.1 MF668267_p43 integrase phrog_1 integrase integration and excision 1 33493 34581
ASZ72684.1 MF668267_p56 hypothetical protein phrog_3186 unknown function unknown function 1 40045 40428
ASZ72655.1 MF668267_p26 minor tail protein phrog_346 minor tail protein tail 1 20849 23281
ASZ72672.1 MF668267_p44 hypothetical protein phrog_950 unknown function unknown function -1 34685 35530
ASZ72681.1 MF668267_p53 hypothetical protein phrog_2781 unknown function unknown function 1 38622 39491
ASZ72706.1 MF668267_p80 hypothetical protein phrog_5776 unknown function unknown function 1 52089 52217
ASZ72660.1 MF668267_p31 holin phrog_565 holin lysis 1 27314 27754
ASZ72700.1 MF668267_p74 hypothetical protein phrog_6689 unknown function unknown function 1 49251 49454
ASZ72680.1 MF668267_p52 WhiB phrog_472 WhiB transcriptional factor transcription regulation 1 38362 38625
ASZ72635.1 MF668267_p6 terminase small subunit phrog_1459 terminase small subunit head and packaging 1 1360 1587
ASZ72636.1 MF668267_p7 terminase large subunit phrog_2 terminase large subunit head and packaging 1 1571 2992
ASZ72705.1 MF668267_p79 hypothetical protein phrog_2974 unknown function unknown function 1 51724 52002
ASZ72708.1 MF668267_p82 hypothetical protein phrog_3868 unknown function unknown function 1 53113 53589
ASZ72691.1 MF668267_p63 exonuclease phrog_1674 exonuclease DNA, RNA and nucleotide metabolism 1 42202 43089
ASZ72690.1 MF668267_p62 hypothetical protein phrog_1498 unknown function unknown function 1 42044 42205
ASZ72717.1 MF668267_p92 hypothetical protein phrog_5812 unknown function unknown function 1 57196 57825
ASZ72676.1 MF668267_p48 hypothetical protein phrog_2908 unknown function unknown function 1 36678 37022
ASZ72701.1 MF668267_p75 peptidase phrog_908 unknown function unknown function 1 49451 50557
ASZ72644.1 MF668267_p15 head-to-tail connector protein phrog_387 neck protein connector 1 9676 9957
ASZ72670.1 MF668267_p42 hypothetical protein phrog_658 unknown function unknown function -1 32833 33135
ASZ72674.1 MF668267_p46 CRO protein phrog_1702 transcriptional repressor transcription regulation 1 36132 36413
ASZ72639.1 MF668267_p10 hypothetical protein phrog_1757 unknown function unknown function 1 7069 7254
ASZ72640.1 MF668267_p11 scaffolding protein phrog_1793 head scaffolding protein head and packaging 1 7291 7833
ASZ72721.1 MF668267_p96 hypothetical protein phrog_23176 unknown function unknown function 1 58942 59412
ASZ72650.1 MF668267_p21 minor tail protein phrog_106 minor tail protein tail 1 15988 17124
ASZ72641.1 MF668267_p12 major capsid protein phrog_10 major head protein head and packaging 1 7909 8844
ASZ72651.1 MF668267_p22 minor tail protein phrog_110 minor tail protein tail 1 17125 18891
ASZ72647.1 MF668267_p19 tail assembly chaperone phrog_1861 unknown function unknown function 1 11206 11643
ASZ72631.1 MF668267_p2 hypothetical protein phrog_5284 unknown function unknown function 1 294 479
ASZ72677.1 MF668267_p49 hypothetical protein phrog_2654 unknown function unknown function 1 37201 37368
ASZ72692.1 MF668267_p64 hypothetical protein phrog_3492 unknown function unknown function 1 43086 43319
ASZ72688.1 MF668267_p60 hypothetical protein phrog_2596 unknown function unknown function 1 41464 41730
ASZ72673.1 MF668267_p45 immunity repressor phrog_1746 transcriptional repressor transcription regulation -1 35615 35992
ASZ72662.1 MF668267_p33 hypothetical protein phrog_1738 unknown function unknown function 1 28092 28343
ASZ72669.1 MF668267_p41 hypothetical protein phrog_32638 unknown function unknown function 1 32592 32789
ASZ72713.1 MF668267_p87 hypothetical protein phrog_3167 unknown function unknown function 1 55385 55750
ASZ72667.1 MF668267_p39 hypothetical protein phrog_38108 unknown function unknown function 1 31339 31626
ASZ72709.1 MF668267_p83 hypothetical protein phrog_20353 unknown function unknown function 1 53564 53746
ASZ72698.1 MF668267_p72 resolvase phrog_3055 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 48102 48800
ASZ72712.1 MF668267_p86 RNA ligase phrog_1075 tRNA splicing ligase DNA, RNA and nucleotide metabolism 1 54198 55385
ASZ72697.1 MF668267_p70 DNA primase phrog_2478 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 45075 47693
ASZ72720.1 MF668267_p95 hypothetical protein phrog_6135 unknown function unknown function 1 58514 58777
ASZ72652.1 MF668267_p23 minor tail protein phrog_1697 minor tail protein tail 1 18891 19367
ASZ72683.1 MF668267_p55 hypothetical protein phrog_301 secreted protein other 1 39698 40048
ASZ72630.1 MF668267_p1 hypothetical protein phrog_4624 unknown function unknown function 1 79 297
ASZ72699.1 MF668267_p73 hypothetical protein phrog_3478 unknown function unknown function 1 48793 49254
ASZ72685.1 MF668267_p57 hypothetical protein phrog_1956 unknown function unknown function 1 40429 40707
ASZ72653.1 MF668267_p24 minor tail protein phrog_1565 minor tail protein tail 1 19451 20533
ASZ72654.1 MF668267_p25 hypothetical protein phrog_1736 minor tail protein tail 1 20540 20848
ASZ72682.1 MF668267_p54 hypothetical protein phrog_542 unknown function unknown function 1 39503 39673
ASZ72724.1 MF668267_p35 hypothetical protein singleton unknown function unknown function 1 29570 29734
ASZ72643.1 MF668267_p14 head-to-tail connector protein phrog_763 head-tail adaptor connector 1 9339 9695
ASZ72711.1 MF668267_p85 hypothetical protein phrog_6426 unknown function unknown function 1 53934 54086
ASZ72722.1 MF668267_p97 hypothetical protein phrog_5633 unknown function unknown function 1 59406 59591
ASZ72658.1 MF668267_p29 lysin A phrog_1519 endolysin lysis 1 24779 26434
ASZ72668.1 MF668267_p40 hypothetical protein singleton unknown function unknown function 1 31617 32591
ASZ72714.1 MF668267_p88 hypothetical protein phrog_2822 unknown function unknown function 1 55750 56301
ASZ72719.1 MF668267_p94 HicA-like toxin phrog_353 toxin moron, auxiliary metabolic gene and host takeover 1 58179 58394
ASZ72666.1 MF668267_p38 hypothetical protein phrog_2433 unknown function unknown function 1 30512 31201
ASZ72638.1 MF668267_p9 capsid maturation protease phrog_1752 head maturation protease head and packaging 1 4562 7072
ASZ72695.1 MF668267_p68 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 44420 44662
ASZ72679.1 MF668267_p51 HTH DNA binding domain protein phrog_2286 unknown function unknown function 1 37574 38365
ASZ72645.1 MF668267_p16 head-to-tail connector protein phrog_123 tail terminator connector 1 9954 10379
ASZ72704.1 MF668267_p78 protease phrog_1006 unknown function unknown function 1 51145 51606
ASZ72675.1 MF668267_p47 HTH DNA binding protein phrog_1840 excisionase integration and excision 1 36410 36676
ASZ72715.1 MF668267_p89 hypothetical protein phrog_2493 unknown function unknown function 1 56294 56866
ASZ72642.1 MF668267_p13 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 8956 9342
ASZ72693.1 MF668267_p65 hypothetical protein phrog_1581 unknown function unknown function 1 43395 43610
ASZ72723.1 MF668267_p98 HNH endonuclease phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 59588 59890
ASZ72718.1 MF668267_p93 HicB-like antitoxin phrog_5243 unknown function unknown function 1 57857 58057
ASZ72665.1 MF668267_p37 hypothetical protein phrog_4112 unknown function unknown function 1 30159 30437
ASZ72686.1 MF668267_p58 hypothetical protein phrog_4832 unknown function unknown function 1 40704 40898
ASZ72707.1 MF668267_p81 DNA binding domain protein phrog_2342 unknown function unknown function 1 52214 53116
ASZ72664.1 MF668267_p36 helix-turn-helix DNA binding domain protein phrog_2311 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 29731 30162
ASZ72656.1 MF668267_p27 minor tail protein phrog_416 minor tail protein tail 1 23293 24306
ASZ72725.1 MF668267_p71 hypothetical protein phrog_7662 unknown function unknown function 1 47693 48049
ASZ72727.1 MF668267_p66 hypothetical protein phrog_2388 unknown function unknown function 1 43610 43729
ASZ72648.1 MF668267_p18 tail assembly chaperone phrog_1326 tail assembly chaperone tail 1 11206 12053
ASZ72633.1 MF668267_p4 hypothetical protein phrog_2293 unknown function unknown function 1 727 954
ASZ72689.1 MF668267_p61 hypothetical protein phrog_2870 unknown function unknown function 1 41727 42047
ASZ72687.1 MF668267_p59 DNA polymerase III subunit phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 40910 41464
ASZ72637.1 MF668267_p8 portal protein phrog_104 portal protein head and packaging 1 3004 4557
ASZ72632.1 MF668267_p3 hypothetical protein phrog_2074 unknown function unknown function 1 476 730
ASZ72646.1 MF668267_p17 major tail protein phrog_117 major tail protein tail 1 10479 11093
ASZ72696.1 MF668267_p69 HNH endonuclease phrog_1571 HNH endonuclease DNA, RNA and nucleotide metabolism 1 44662 45033
ASZ72657.1 MF668267_p28 hypothetical protein phrog_240 head protein head and packaging 1 24390 24761
ASZ72710.1 MF668267_p84 hypothetical protein phrog_666 unknown function unknown function 1 53740 53937