| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF668268 |
Definition |
Mycobacterium phage Aroostook, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Liefievirus; unclassified Liefievirus. |
DB of origin |
NUCCORE |
Length |
41903 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
63 |
%GC |
66.63 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASZ72747.1 | MF668268_p20 | minor tail protein | phrog_1565 | minor tail protein | tail | 1 | 18861 | 19997 |
| ASZ72765.1 | MF668268_p38 | hypothetical protein | phrog_986 | RNA-binding protein | DNA, RNA and nucleotide metabolism | 1 | 30928 | 31278 |
| ASZ72757.1 | MF668268_p30 | hypothetical protein | phrog_1177 | unknown function | unknown function | 1 | 26790 | 27110 |
| ASZ72786.1 | MF668268_p62 | HNH endonuclease | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 41127 | 41453 |
| ASZ72733.1 | MF668268_p6 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 6514 | 7056 |
| ASZ72787.1 | MF668268_p47 | hypothetical protein | phrog_15494 | unknown function | unknown function | 1 | 35517 | 35906 |
| ASZ72744.1 | MF668268_p17 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 15477 | 16649 |
| ASZ72731.1 | MF668268_p4 | capsid muturation protase | phrog_1752 | head maturation protease | head and packaging | 1 | 3403 | 6192 |
| ASZ72735.1 | MF668268_p8 | head-to-tail connector protein | phrog_3101 | unknown function | unknown function | 1 | 8075 | 8302 |
| ASZ72789.1 | MF668268_p63 | hypothetical protein | phrog_3468 | unknown function | unknown function | 1 | 41547 | 41768 |
| ASZ72753.1 | MF668268_p26 | hypothetical protein | phrog_8517 | unknown function | unknown function | 1 | 23630 | 23824 |
| ASZ72737.1 | MF668268_p10 | head-to-tail connector protein | phrog_763 | head-tail adaptor | connector | 1 | 8808 | 9167 |
| ASZ72783.1 | MF668268_p59 | hypothetical protein | phrog_5505 | unknown function | unknown function | 1 | 40213 | 40395 |
| ASZ72739.1 | MF668268_p12 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 9414 | 9857 |
| ASZ72742.1 | MF668268_p14 | tail assembly chaperone | phrog_1326 | tail assembly chaperone | tail | 1 | 10569 | 11464 |
| ASZ72763.1 | MF668268_p36 | hypothetical protein | phrog_549 | unknown function | unknown function | 1 | 30150 | 30749 |
| ASZ72762.1 | MF668268_p35 | hypothetical protein | phrog_5081 | unknown function | unknown function | 1 | 29752 | 30150 |
| ASZ72730.1 | MF668268_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 1888 | 3402 |
| ASZ72729.1 | MF668268_p2 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 455 | 1891 |
| ASZ72766.1 | MF668268_p39 | hypothetical protein | phrog_7486 | unknown function | unknown function | 1 | 31275 | 31424 |
| ASZ72752.1 | MF668268_p25 | hypothetical protein | phrog_9511 | unknown function | unknown function | 1 | 23352 | 23630 |
| ASZ72770.1 | MF668268_p43 | ssDNA binding protein | phrog_4171 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 32989 | 34398 |
| ASZ72782.1 | MF668268_p58 | hypothetical protein | phrog_5436 | unknown function | unknown function | 1 | 39416 | 40213 |
| ASZ72784.1 | MF668268_p60 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 40427 | 40762 |
| ASZ72750.1 | MF668268_p23 | hypothetical protein | phrog_7598 | unknown function | unknown function | 1 | 22850 | 23170 |
| ASZ72759.1 | MF668268_p32 | integrase | phrog_1 | integrase | integration and excision | -1 | 27721 | 28917 |
| ASZ72749.1 | MF668268_p22 | minor tail protein | phrog_7565 | minor tail protein | tail | 1 | 20442 | 22835 |
| ASZ72743.1 | MF668268_p16 | tape measure protein | phrog_971 | endolysin | lysis | 1 | 11464 | 15477 |
| ASZ72728.1 | MF668268_p1 | terminase small subunit | phrog_1459 | terminase small subunit | head and packaging | 1 | 43 | 387 |
| ASZ72774.1 | MF668268_p49 | hypothetical protein | phrog_2247 | unknown function | unknown function | 1 | 36136 | 36480 |
| ASZ72767.1 | MF668268_p40 | hypothetical protein | phrog_7392 | unknown function | unknown function | 1 | 31424 | 31774 |
| ASZ72780.1 | MF668268_p56 | hypothetical protein | phrog_7600 | unknown function | unknown function | 1 | 38650 | 39078 |
| ASZ72738.1 | MF668268_p11 | head-to-tail connector protein | phrog_387 | neck protein | connector | 1 | 9154 | 9417 |
| ASZ72756.1 | MF668268_p29 | holin | phrog_7198 | holin | lysis | 1 | 26435 | 26785 |
| ASZ72736.1 | MF668268_p9 | head-to-tail connector protein | phrog_1290 | head-tail adaptor | connector | 1 | 8314 | 8811 |
| ASZ72764.1 | MF668268_p37 | hypothetical protein | phrog_10116 | unknown function | unknown function | 1 | 30749 | 30931 |
| ASZ72758.1 | MF668268_p31 | hypothetical protein | phrog_798 | unknown function | unknown function | 1 | 27107 | 27724 |
| ASZ72751.1 | MF668268_p24 | hypothetical protein | phrog_8923 | unknown function | unknown function | 1 | 23173 | 23355 |
| ASZ72775.1 | MF668268_p50 | hypothetical protein | phrog_7576 | unknown function | unknown function | 1 | 36477 | 36917 |
| ASZ72785.1 | MF668268_p61 | hypothetical protein | phrog_7328 | unknown function | unknown function | 1 | 40861 | 41103 |
| ASZ72754.1 | MF668268_p27 | lysin A | phrog_880 | endolysin | lysis | 1 | 23885 | 25201 |
| ASZ72741.1 | MF668268_p15 | tail assembly chaperone | phrog_1861 | unknown function | unknown function | 1 | 10569 | 11078 |
| ASZ72760.1 | MF668268_p33 | immunity repressor | phrog_2328 | transcriptional repressor | transcription regulation | -1 | 28914 | 29324 |
| ASZ72776.1 | MF668268_p51 | resolvase | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 36914 | 37504 |
| ASZ72778.1 | MF668268_p54 | hypothetical protein | phrog_9043 | unknown function | unknown function | 1 | 38046 | 38498 |
| ASZ72732.1 | MF668268_p5 | hypothetical protein | phrog_1757 | unknown function | unknown function | 1 | 6189 | 6395 |
| ASZ72768.1 | MF668268_p41 | hypothetical protein | phrog_6734 | unknown function | unknown function | 1 | 31758 | 31910 |
| ASZ72777.1 | MF668268_p52 | hypothetical protein | phrog_13172 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 37501 | 37611 |
| ASZ72734.1 | MF668268_p7 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 7103 | 8038 |
| ASZ72779.1 | MF668268_p55 | hypothetical protein | phrog_10006 | unknown function | unknown function | 1 | 38495 | 38653 |
| ASZ72748.1 | MF668268_p21 | minor tail protein | phrog_1736 | minor tail protein | tail | 1 | 20008 | 20442 |
| ASZ72745.1 | MF668268_p18 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 16649 | 18403 |
| ASZ72772.1 | MF668268_p46 | hypothetical protein | phrog_14897 | unknown function | unknown function | 1 | 35128 | 35520 |
| ASZ72788.1 | MF668268_p53 | hypothetical protein | phrog_1900 | mobile element MPME | moron, auxiliary metabolic gene and host takeover | 1 | 37660 | 38049 |
| ASZ72769.1 | MF668268_p42 | exonuclease | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | 1 | 31907 | 32992 |
| ASZ72740.1 | MF668268_p13 | major tail protein | phrog_117 | major tail protein | tail | 1 | 9854 | 10468 |
| ASZ72790.1 | MF668268_p45 | hypothetical protein | phrog_17287 | unknown function | unknown function | 1 | 34946 | 35164 |
| ASZ72755.1 | MF668268_p28 | lysin B | phrog_102 | endolysin | lysis | 1 | 25201 | 26409 |
| ASZ72781.1 | MF668268_p57 | hypothetical protein | phrog_11054 | unknown function | unknown function | 1 | 39135 | 39419 |
| ASZ72773.1 | MF668268_p48 | hypothetical protein | phrog_7826 | unknown function | unknown function | 1 | 35894 | 36139 |
| ASZ72746.1 | MF668268_p19 | minor tail protein | phrog_1697 | minor tail protein | tail | 1 | 18403 | 18864 |
| ASZ72761.1 | MF668268_p34 | recombination directionality factor | phrog_7506 | recombination directionality factor | integration and excision | 1 | 29498 | 29755 |
| ASZ72771.1 | MF668268_p44 | hypothetical protein | phrog_7227 | unknown function | unknown function | 1 | 34395 | 34949 |